RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 VARS2Q5ST30 1063 aaKnown RBP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 RBM26Q5T8P6 1007 aaKnown RBP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 SMYD5Q6GMV2 418 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 PPFIBP1Q86W92 1011 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 AMOTL1Q8IY63 956 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 SPATA5Q8NB90 893 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 JARID2Q92833 1246 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 CCDC47Q96A33 483 aaKnown RBP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 PKNOX2Q96KN3 472 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 HS3ST6Q96QI5 342 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 XPO4Q9C0E2 1151 aaKnown RBP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 PUS7LQ9H0K6 701 aaKnown RBP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 ACBD3Q9H3P7 528 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 DNAI1Q9UI46 699 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 ZNF330Q9Y3S2 320 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 CCDC9Q9Y3X0 531 aaKnown RBP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 CLIC4Q9Y696 253 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 TAF6LQ9Y6J9 622 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 MYH15Q9Y2K3 1946 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 ZNF532Q9HCE3 1301 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 LRP6O75581 1613 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 EFCAB8A8MWE9 144 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 MMP1P03956 469 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 MYL1P05976 194 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 MCM3P25205 808 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 CALML3P27482 149 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 HAND2P61296 217 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 CCZ1BP86790 482 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 CCZ1P86791 482 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-250ENST00000568290 NCBP1Q09161 790 aaKnown RBP8.72□□□□□ -1.01
ATXN3-250ENST00000568290 LRMPQ12912 555 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 POSTNQ15063 836 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 CAVIN4Q5BKX8 364 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 AXDND1Q5T1B0 1012 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-250ENST00000568290 TMCO3Q6UWJ1 677 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 BRINP3Q76B58 766 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 CATIPQ7Z7H3 387 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 DZIP3Q86Y13 1208 aaKnown RBP8.72□□□□□ -1.01
ATXN3-250ENST00000568290 IFNL3Q8IZI9 196 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 SMARCC1Q92922 1105 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-250ENST00000568290 IQCDQ96DY2 449 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 FAM89AQ96GI7 184 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 ZNF594Q96JF6 807 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-250ENST00000568290 GSDMAQ96QA5 445 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 STRBPQ96SI9 672 aaKnown RBP8.72□□□□□ -1.01
ATXN3-250ENST00000568290 UTP14AQ9BVJ6 771 aaKnown RBP8.72□□□□□ -1.01
ATXN3-250ENST00000568290 GBP3Q9H0R5 595 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 L2HGDHQ9H9P8 463 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 SLAIN2Q9P270 581 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 NRBP1Q9UHY1 535 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 HPS5Q9UPZ3 1129 aa8.72□□□□□ -1.01
ATXN3-250ENST00000568290 SRPRBQ9Y5M8 271 aaKnown RBP8.72□□□□□ -1.01
ATXN3-250ENST00000568290 FAM205CA6NFA0 338 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 TRIM75PA6NK02 468 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 ERLIN1O75477 346 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 DDAH1O94760 285 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 PTPREP23469 700 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 CASQ1P31415 396 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 KIF5BP33176 963 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 MCAMP43121 646 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 GNAQP50148 359 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 TSR1Q2NL82 804 aaKnown RBP8.71□□□□□ -1.02
ATXN3-250ENST00000568290 NT5DC1Q5TFE4 455 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 SPECC1LQ69YQ0 1117 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 TTLL5Q6EMB2 1281 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 MICU3Q86XE3 530 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 CNGA4Q8IV77 575 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 VSTM4Q8IW00 320 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 TXLNBQ8N3L3 684 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 MPNDQ8N594 471 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 CABLES1Q8TDN4 633 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 IGDCC4Q8TDY8 1250 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 ERCC4Q92889 916 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-250ENST00000568290 SLC26A6Q9BXS9 759 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 PUS3Q9BZE2 481 aaKnown RBP8.71□□□□□ -1.02
ATXN3-250ENST00000568290 LY9Q9HBG7 655 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 ZNF287Q9HBT7 754 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 NPDC1Q9NQX5 325 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-250ENST00000568290 TOMM22Q9NS69 142 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 LRP2BPQ9P2M1 347 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 MYO1AQ9UBC5 1043 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 DDX41Q9UJV9 622 aaKnown RBP8.71□□□□□ -1.02
ATXN3-250ENST00000568290 ANAPC4Q9UJX5 808 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 DENND2AQ9ULE3 1009 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 THRAP3Q9Y2W1 955 aaKnown RBP8.71□□□□□ -1.02
ATXN3-250ENST00000568290 NDUFB9Q9Y6M9 179 aa8.71□□□□□ -1.02
ATXN3-250ENST00000568290 V9GYY5 206 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-250ENST00000568290 PDS5AQ29RF7 1337 aaKnown RBP8.71□□□□□ -1.02
ATXN3-250ENST00000568290 CCDC175P0C221 793 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 ADORA1P30542 326 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 KRT2P35908 639 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 ANTXR2P58335 489 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 STIM1Q13586 685 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 UBE4AQ14139 1066 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 PTPAQ15257 358 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 DPCR1Q3MIW9 517 aa8.7□□□□□ -1.02
ATXN3-250ENST00000568290 CCDC144BQ3MJ40 725 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms