RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 SLC9C2Q5TAH2 1124 aa19.02■□□□□ 0.64
CDH3-204ENST00000565453 TATDN1Q6P1N9 297 aa19.02■□□□□ 0.64
CDH3-204ENST00000565453 TRIM34Q9BYJ4 488 aa19.02■□□□□ 0.64
CDH3-204ENST00000565453 GABRQQ9UN88 632 aa19.02■□□□□ 0.64
CDH3-204ENST00000565453 KIAA0100Q14667 2235 aaKnown RBP19.02■□□□□ 0.64
CDH3-204ENST00000565453 ZNF532Q9HCE3 1301 aa19.01■□□□□ 0.63
CDH3-204ENST00000565453 MAGEB6P1A0A0J9YX57 407 aa19.01■□□□□ 0.63
CDH3-204ENST00000565453 MTMR2Q13614 643 aa19.01■□□□□ 0.63
CDH3-204ENST00000565453 PRPF38BQ5VTL8 546 aaKnown RBP19.01■□□□□ 0.63
CDH3-204ENST00000565453 ANKRD13CQ8N6S4 541 aa19.01■□□□□ 0.63
CDH3-204ENST00000565453 RAET1EQ8TD07 263 aa19.01■□□□□ 0.63
CDH3-204ENST00000565453 ASCC2Q9H1I8 757 aaPredicted RBP19.01■□□□□ 0.63
CDH3-204ENST00000565453 GRK4P32298 578 aa19■□□□□ 0.63
CDH3-204ENST00000565453 PABPC4Q13310 644 aaKnown RBP eCLIP19■□□□□ 0.63
CDH3-204ENST00000565453 MTFR1Q15390 333 aa19■□□□□ 0.63
CDH3-204ENST00000565453 FAM110CQ1W6H9 321 aa19■□□□□ 0.63
CDH3-204ENST00000565453 BCL11AQ9H165 835 aa19■□□□□ 0.63
CDH3-204ENST00000565453 BOLA2Q9H3K6 86 aa19■□□□□ 0.63
CDH3-204ENST00000565453 PAG1Q9NWQ8 432 aa19■□□□□ 0.63
CDH3-204ENST00000565453 SERPINB13Q9UIV8 391 aa19■□□□□ 0.63
CDH3-204ENST00000565453 NAV1Q8NEY1 1877 aa18.99■□□□□ 0.63
CDH3-204ENST00000565453 C19orf81C9J6K1 198 aa18.99■□□□□ 0.63
CDH3-204ENST00000565453 MYCP01106 439 aaPredicted RBP18.99■□□□□ 0.63
CDH3-204ENST00000565453 HOXA7P31268 230 aaPredicted RBP18.99■□□□□ 0.63
CDH3-204ENST00000565453 GCLCP48506 637 aaPredicted RBP18.99■□□□□ 0.63
CDH3-204ENST00000565453 PLCD1P51178 756 aa18.99■□□□□ 0.63
CDH3-204ENST00000565453 TTC6Q86TZ1 520 aa18.99■□□□□ 0.63
CDH3-204ENST00000565453 LCORLQ8N3X6 602 aa18.99■□□□□ 0.63
CDH3-204ENST00000565453 HAUS7Q99871 368 aa18.99■□□□□ 0.63
CDH3-204ENST00000565453 LRRCC1Q9C099 1032 aa18.99■□□□□ 0.63
CDH3-204ENST00000565453 USP17L10C9JJH3 530 aa18.98■□□□□ 0.63
CDH3-204ENST00000565453 SMARCA5O60264 1052 aaPredicted RBP18.98■□□□□ 0.63
CDH3-204ENST00000565453 GH2P01242 217 aa18.98■□□□□ 0.63
CDH3-204ENST00000565453 ADD2P35612 726 aa18.98■□□□□ 0.63
CDH3-204ENST00000565453 FLT3LGP49771 235 aa18.98■□□□□ 0.63
CDH3-204ENST00000565453 GABPAQ06546 454 aa18.98■□□□□ 0.63
CDH3-204ENST00000565453 CRNKL1Q9BZJ0 848 aaKnown RBP18.98■□□□□ 0.63
CDH3-204ENST00000565453 TMOD4Q9NZQ9 345 aa18.98■□□□□ 0.63
CDH3-204ENST00000565453 TNPO2O14787 897 aaKnown RBP18.97■□□□□ 0.63
CDH3-204ENST00000565453 SHMT1P34896 483 aa18.97■□□□□ 0.63
CDH3-204ENST00000565453 EVX2Q03828 476 aa18.97■□□□□ 0.63
CDH3-204ENST00000565453 IRF5Q13568 498 aa18.97■□□□□ 0.63
CDH3-204ENST00000565453 SLFNL1Q499Z3 407 aa18.97■□□□□ 0.63
CDH3-204ENST00000565453 SLAIN1Q8ND83 568 aa18.97■□□□□ 0.63
CDH3-204ENST00000565453 EMILIN3Q9NT22 766 aa18.97■□□□□ 0.63
CDH3-204ENST00000565453 MORF4L1Q9UBU8 362 aa18.97■□□□□ 0.63
CDH3-204ENST00000565453 CENPFP49454 3210 aa18.96■□□□□ 0.63
CDH3-204ENST00000565453 SDR42E1Q8WUS8 393 aa18.96■□□□□ 0.63
CDH3-204ENST00000565453 SHISA4Q96DD7 197 aa18.96■□□□□ 0.63
CDH3-204ENST00000565453 P2RX7Q99572 595 aaKnown RBP18.96■□□□□ 0.63
CDH3-204ENST00000565453 DCTPP1Q9H773 170 aa18.96■□□□□ 0.63
CDH3-204ENST00000565453 DCP1AQ9NPI6 582 aaPredicted RBP18.96■□□□□ 0.63
CDH3-204ENST00000565453 ADCY3O60266 1144 aa18.95■□□□□ 0.62
CDH3-204ENST00000565453 CHGBP05060 677 aa18.95■□□□□ 0.62
CDH3-204ENST00000565453 POLR3DP05423 398 aaPredicted RBP18.95■□□□□ 0.62
CDH3-204ENST00000565453 CCL5P13501 91 aa18.95■□□□□ 0.62
CDH3-204ENST00000565453 CERKLQ49MI3 558 aaPredicted RBP18.95■□□□□ 0.62
CDH3-204ENST00000565453 PXYLP1Q8TE99 480 aa18.95■□□□□ 0.62
CDH3-204ENST00000565453 C12orf42Q96LP6 360 aa18.95■□□□□ 0.62
CDH3-204ENST00000565453 ARMT1Q9H993 441 aa18.95■□□□□ 0.62
CDH3-204ENST00000565453 MCM9Q9NXL9 1143 aa18.95■□□□□ 0.62
CDH3-204ENST00000565453 GUCY1A2P33402 732 aa18.94■□□□□ 0.62
CDH3-204ENST00000565453 UBXN2AP68543 259 aa18.94■□□□□ 0.62
CDH3-204ENST00000565453 IRX3P78415 501 aaPredicted RBP18.94■□□□□ 0.62
CDH3-204ENST00000565453 ABCB5Q2M3G0 1257 aa18.94■□□□□ 0.62
CDH3-204ENST00000565453 USP17L2Q6R6M4 530 aa18.94■□□□□ 0.62
CDH3-204ENST00000565453 COA7Q96BR5 231 aa18.94■□□□□ 0.62
CDH3-204ENST00000565453 TXNRD2Q9NNW7 524 aa18.94■□□□□ 0.62
CDH3-204ENST00000565453 DOCK3Q8IZD9 2030 aa18.93■□□□□ 0.62
CDH3-204ENST00000565453 PRKAB2O43741 272 aa18.93■□□□□ 0.62
CDH3-204ENST00000565453 MBD4O95243 580 aa18.93■□□□□ 0.62
CDH3-204ENST00000565453 CYP2D6P10635 497 aa18.93■□□□□ 0.62
CDH3-204ENST00000565453 ELNP15502 786 aa18.93■□□□□ 0.62
CDH3-204ENST00000565453 HERVK_113P62684 666 aa18.93■□□□□ 0.62
CDH3-204ENST00000565453 UBE3CQ15386 1083 aa18.93■□□□□ 0.62
CDH3-204ENST00000565453 POTEEQ6S8J3 1075 aa18.93■□□□□ 0.62
CDH3-204ENST00000565453 ACER1Q8TDN7 264 aa18.93■□□□□ 0.62
CDH3-204ENST00000565453 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.93■□□□□ 0.62
CDH3-204ENST00000565453 GJD2Q9UKL4 321 aa18.93■□□□□ 0.62
CDH3-204ENST00000565453 BRCA2P51587 3418 aa18.93■□□□□ 0.62
CDH3-204ENST00000565453 MYH7P12883 1935 aa18.92■□□□□ 0.62
CDH3-204ENST00000565453 PEX10O60683 326 aa18.92■□□□□ 0.62
CDH3-204ENST00000565453 GJB1P08034 283 aa18.92■□□□□ 0.62
CDH3-204ENST00000565453 GJA8P48165 433 aa18.92■□□□□ 0.62
CDH3-204ENST00000565453 RAB3GAP1Q15042 981 aa18.92■□□□□ 0.62
CDH3-204ENST00000565453 KIAA1683Q9H0B3 1180 aa18.92■□□□□ 0.62
CDH3-204ENST00000565453 UNC93B1Q9H1C4 597 aa18.92■□□□□ 0.62
CDH3-204ENST00000565453 ECHDC1Q9NTX5 307 aa18.92■□□□□ 0.62
CDH3-204ENST00000565453 RBPJLQ9UBG7 517 aa18.92■□□□□ 0.62
CDH3-204ENST00000565453 BIN2Q9UBW5 565 aaPredicted RBP18.92■□□□□ 0.62
CDH3-204ENST00000565453 PCDHB15Q9Y5E8 787 aa18.92■□□□□ 0.62
CDH3-204ENST00000565453 PLXNB2O15031 1838 aa18.92■□□□□ 0.62
CDH3-204ENST00000565453 INHAP05111 366 aa18.91■□□□□ 0.62
CDH3-204ENST00000565453 SLC44A5Q8NCS7 719 aa18.91■□□□□ 0.62
CDH3-204ENST00000565453 RNF208Q9H0X6 261 aa18.91■□□□□ 0.62
CDH3-204ENST00000565453 CABP5Q9NP86 173 aa18.91■□□□□ 0.62
CDH3-204ENST00000565453 ATP8A2Q9NTI2 1148 aa18.91■□□□□ 0.62
CDH3-204ENST00000565453 SLC34A2O95436 690 aa18.9■□□□□ 0.62
CDH3-204ENST00000565453 USP14P54578 494 aa18.9■□□□□ 0.62
CDH3-204ENST00000565453 RRP1P56182 461 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms