RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-213ENST00000564757 MPZL3Q6UWV2 235 aa5.58□□□□□ -1.52
SCAPER-213ENST00000564757 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCAPER-213ENST00000564757 SREK1Q8WXA9 508 aaKnown RBP5.58□□□□□ -1.52
SCAPER-213ENST00000564757 DRC1Q96MC2 740 aa5.58□□□□□ -1.52
SCAPER-213ENST00000564757 C12orf49Q9H741 205 aa5.58□□□□□ -1.52
SCAPER-213ENST00000564757 SHROOM4Q9ULL8 1493 aa5.58□□□□□ -1.52
SCAPER-213ENST00000564757 KRT1P04264 644 aa5.57□□□□□ -1.52
SCAPER-213ENST00000564757 BUD31P41223 144 aaPredicted RBP5.57□□□□□ -1.52
SCAPER-213ENST00000564757 FANCCQ00597 558 aa5.57□□□□□ -1.52
SCAPER-213ENST00000564757 TTLL10Q6ZVT0 673 aa5.57□□□□□ -1.52
SCAPER-213ENST00000564757 FAM214BQ7L5A3 538 aa5.57□□□□□ -1.52
SCAPER-213ENST00000564757 KCNB2Q92953 911 aa5.57□□□□□ -1.52
SCAPER-213ENST00000564757 KIRREL1Q96J84 757 aa5.57□□□□□ -1.52
SCAPER-213ENST00000564757 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
SCAPER-213ENST00000564757 CAPN10Q9HC96 672 aa5.57□□□□□ -1.52
SCAPER-213ENST00000564757 FAM8A1Q9UBU6 413 aa5.57□□□□□ -1.52
SCAPER-213ENST00000564757 GTF2IRD1Q9UHL9 959 aa5.57□□□□□ -1.52
SCAPER-213ENST00000564757 TMEM238LA0A1B0GVL6 79 aa5.56□□□□□ -1.52
SCAPER-213ENST00000564757 GNL2Q13823 731 aaKnown RBP5.56□□□□□ -1.52
SCAPER-213ENST00000564757 SF3A1Q15459 793 aaKnown RBP5.56□□□□□ -1.52
SCAPER-213ENST00000564757 NKPD1Q17RQ9 610 aa5.56□□□□□ -1.52
SCAPER-213ENST00000564757 NXPE4Q6UWF7 544 aa5.56□□□□□ -1.52
SCAPER-213ENST00000564757 HS2ST1Q7LGA3 356 aa5.56□□□□□ -1.52
SCAPER-213ENST00000564757 PDZD3Q86UT5 571 aa5.56□□□□□ -1.52
SCAPER-213ENST00000564757 BCO2Q9BYV7 579 aa5.56□□□□□ -1.52
SCAPER-213ENST00000564757 GPN3Q9UHW5 284 aaPredicted RBP5.56□□□□□ -1.52
SCAPER-213ENST00000564757 PITPNM2Q9BZ72 1349 aa5.55□□□□□ -1.52
SCAPER-213ENST00000564757 IGF2BP3O00425 579 aaKnown RBP eCLIP5.55□□□□□ -1.52
SCAPER-213ENST00000564757 NFIBO00712 420 aa5.55□□□□□ -1.52
SCAPER-213ENST00000564757 USP17L7P0C7H9 530 aa5.55□□□□□ -1.52
SCAPER-213ENST00000564757 TAF1CQ15572 869 aaPredicted RBP5.55□□□□□ -1.52
SCAPER-213ENST00000564757 LDLRAD1Q5T700 205 aa5.55□□□□□ -1.52
SCAPER-213ENST00000564757 RNF214Q8ND24 703 aa5.55□□□□□ -1.52
SCAPER-213ENST00000564757 OSBPL7Q9BZF2 842 aa5.55□□□□□ -1.52
SCAPER-213ENST00000564757 SRCIN1Q9C0H9 1055 aa5.55□□□□□ -1.52
SCAPER-213ENST00000564757 TGIF2Q9GZN2 237 aa5.55□□□□□ -1.52
SCAPER-213ENST00000564757 RAPGEFL1Q9UHV5 662 aa5.55□□□□□ -1.52
SCAPER-213ENST00000564757 GGT7Q9UJ14 662 aa5.55□□□□□ -1.52
SCAPER-213ENST00000564757 TTF2Q9UNY4 1162 aaKnown RBP5.55□□□□□ -1.52
SCAPER-213ENST00000564757 CTSHP09668 335 aa5.54□□□□□ -1.52
SCAPER-213ENST00000564757 GSTT1P30711 240 aa5.54□□□□□ -1.52
SCAPER-213ENST00000564757 CLCN7P51798 805 aa5.54□□□□□ -1.52
SCAPER-213ENST00000564757 ZC3H12AQ5D1E8 599 aaKnown RBP5.54□□□□□ -1.52
SCAPER-213ENST00000564757 TMEM67Q5HYA8 995 aa5.54□□□□□ -1.52
SCAPER-213ENST00000564757 CYFIP1Q7L576 1253 aa5.54□□□□□ -1.52
SCAPER-213ENST00000564757 USP48Q86UV5 1035 aa5.54□□□□□ -1.52
SCAPER-213ENST00000564757 METTL16Q86W50 562 aaKnown RBP5.54□□□□□ -1.52
SCAPER-213ENST00000564757 FBXO15Q8NCQ5 510 aaPredicted RBP5.54□□□□□ -1.52
SCAPER-213ENST00000564757 DIRC2Q96SL1 478 aa5.54□□□□□ -1.52
SCAPER-213ENST00000564757 CARS2Q9HA77 564 aaKnown RBP5.54□□□□□ -1.52
SCAPER-213ENST00000564757 PRDM10Q9NQV6 1147 aa5.54□□□□□ -1.52
SCAPER-213ENST00000564757 TRAK1Q9UPV9 953 aa5.54□□□□□ -1.52
SCAPER-213ENST00000564757 GNAT3A8MTJ3 354 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 NPIPB6E9PJ23 425 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 FCGRTP55899 365 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 ERVK-24P63145 666 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 PPP2R3AQ06190 1150 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 GRM2Q14416 872 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 MEI1Q5TIA1 1274 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 STK35Q8TDR2 534 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 TANGO6Q9C0B7 1094 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 ACBD3Q9H3P7 528 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 NSUN3Q9H649 340 aaKnown RBP5.53□□□□□ -1.52
SCAPER-213ENST00000564757 C19orf73Q9NVV2 129 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 INPP5FQ9Y2H2 1132 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.53□□□□□ -1.52
SCAPER-213ENST00000564757 PCDHGB7Q9Y5F8 929 aa5.53□□□□□ -1.52
SCAPER-213ENST00000564757 LOC105371045A0A1W2PR82 267 aa5.52□□□□□ -1.53
SCAPER-213ENST00000564757 INHBBP09529 407 aa5.52□□□□□ -1.53
SCAPER-213ENST00000564757 ZNF394Q53GI3 561 aa5.52□□□□□ -1.53
SCAPER-213ENST00000564757 MAP1SQ66K74 1059 aaPredicted RBP5.52□□□□□ -1.53
SCAPER-213ENST00000564757 DTHD1Q6ZMT9 781 aa5.52□□□□□ -1.53
SCAPER-213ENST00000564757 UBE3DQ7Z6J8 389 aa5.52□□□□□ -1.53
SCAPER-213ENST00000564757 SULF2Q8IWU5 870 aa5.52□□□□□ -1.53
SCAPER-213ENST00000564757 ZNF654Q8IZM8 581 aa5.52□□□□□ -1.53
SCAPER-213ENST00000564757 TMEM39AQ9NV64 488 aa5.52□□□□□ -1.53
SCAPER-213ENST00000564757 DNAJA1P31689 397 aaKnown RBP5.51□□□□□ -1.53
SCAPER-213ENST00000564757 NTF4P34130 210 aa5.51□□□□□ -1.53
SCAPER-213ENST00000564757 RAD51AP2Q09MP3 1159 aa5.51□□□□□ -1.53
SCAPER-213ENST00000564757 PPM1JQ5JR12 505 aa5.51□□□□□ -1.53
SCAPER-213ENST00000564757 VPS37DQ86XT2 251 aa5.51□□□□□ -1.53
SCAPER-213ENST00000564757 GPBAR1Q8TDU6 330 aa5.51□□□□□ -1.53
SCAPER-213ENST00000564757 UBXN4Q92575 508 aa5.51□□□□□ -1.53
SCAPER-213ENST00000564757 AKAP2Q9Y2D5 859 aa5.51□□□□□ -1.53
SCAPER-213ENST00000564757 USP31Q70CQ4 1352 aa5.51□□□□□ -1.53
SCAPER-213ENST00000564757 EOMESO95936 686 aa5.5□□□□□ -1.53
SCAPER-213ENST00000564757 GDNFP39905 211 aa5.5□□□□□ -1.53
SCAPER-213ENST00000564757 TNNI2P48788 182 aa5.5□□□□□ -1.53
SCAPER-213ENST00000564757 CCDC85BQ15834 202 aaPredicted RBP5.5□□□□□ -1.53
SCAPER-213ENST00000564757 KCNA10Q16322 511 aa5.5□□□□□ -1.53
SCAPER-213ENST00000564757 AMIGO3Q86WK7 504 aa5.5□□□□□ -1.53
SCAPER-213ENST00000564757 ACSBG1Q96GR2 724 aa5.5□□□□□ -1.53
SCAPER-213ENST00000564757 FOXQ1Q9C009 403 aa5.5□□□□□ -1.53
SCAPER-213ENST00000564757 KCNK12Q9HB15 430 aa5.5□□□□□ -1.53
SCAPER-213ENST00000564757 ATP13A1Q9HD20 1204 aa5.5□□□□□ -1.53
SCAPER-213ENST00000564757 CD320Q9NPF0 282 aa5.5□□□□□ -1.53
SCAPER-213ENST00000564757 PRDM5Q9NQX1 630 aaPredicted RBP5.5□□□□□ -1.53
SCAPER-213ENST00000564757 DDX41Q9UJV9 622 aaKnown RBP5.5□□□□□ -1.53
SCAPER-213ENST00000564757 CSADQ9Y600 493 aa5.5□□□□□ -1.53
SCAPER-213ENST00000564757 TMEM253P0C7T8 217 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms