RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 DDAH1O94760 285 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 PTPREP23469 700 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 CASQ1P31415 396 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 KIF5BP33176 963 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 MCAMP43121 646 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 GNAQP50148 359 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 FOSBP53539 338 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 TSR1Q2NL82 804 aaKnown RBP8.71□□□□□ -1.02
ATXN3-249ENST00000564606 NT5DC1Q5TFE4 455 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 SPECC1LQ69YQ0 1117 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 TTLL5Q6EMB2 1281 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 MICU3Q86XE3 530 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 CNGA4Q8IV77 575 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 VSTM4Q8IW00 320 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 TXLNBQ8N3L3 684 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 MPNDQ8N594 471 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 SP7Q8TDD2 431 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-249ENST00000564606 CABLES1Q8TDN4 633 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 IGDCC4Q8TDY8 1250 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 ERCC4Q92889 916 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-249ENST00000564606 SLC26A6Q9BXS9 759 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 PUS3Q9BZE2 481 aaKnown RBP8.71□□□□□ -1.02
ATXN3-249ENST00000564606 LY9Q9HBG7 655 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 ZNF287Q9HBT7 754 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 TOMM22Q9NS69 142 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 LRP2BPQ9P2M1 347 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 MYO1AQ9UBC5 1043 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 METRNQ9UJH8 293 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 DDX41Q9UJV9 622 aaKnown RBP8.71□□□□□ -1.02
ATXN3-249ENST00000564606 ANAPC4Q9UJX5 808 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 DENND2AQ9ULE3 1009 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 THRAP3Q9Y2W1 955 aaKnown RBP8.71□□□□□ -1.02
ATXN3-249ENST00000564606 NDUFB9Q9Y6M9 179 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 V9GYY5 206 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-249ENST00000564606 PDS5AQ29RF7 1337 aaKnown RBP8.71□□□□□ -1.02
ATXN3-249ENST00000564606 CCDC175P0C221 793 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 ADORA1P30542 326 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 KRT2P35908 639 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 ANTXR2P58335 489 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 STIM1Q13586 685 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 UBE4AQ14139 1066 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 PTPAQ15257 358 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 DPCR1Q3MIW9 517 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 CCDC144BQ3MJ40 725 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 SPTY2D1Q68D10 685 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-249ENST00000564606 GALNT17Q6IS24 598 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 CLEC4GQ6UXB4 293 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 CHST3Q7LGC8 479 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 DNAJC10Q8IXB1 793 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 CCDC144CPQ8IYA2 1237 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 DIS3L2Q8IYB7 885 aaKnown RBP8.7□□□□□ -1.02
ATXN3-249ENST00000564606 ZNF710Q8N1W2 664 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 C17orf53Q8N3J3 647 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-249ENST00000564606 GPR161Q8N6U8 529 aaKnown RBP8.7□□□□□ -1.02
ATXN3-249ENST00000564606 CEP112Q8N8E3 955 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 SLC39A7Q92504 469 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 PPP1R13BQ96KQ4 1090 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 PANX2Q96RD6 677 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 BAG1Q99933 345 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-249ENST00000564606 AATFQ9NY61 560 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATXN3-249ENST00000564606 SLC4A4Q9Y6R1 1079 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 TJP1Q07157 1748 aa8.7□□□□□ -1.02
ATXN3-249ENST00000564606 B4E1Z4 1266 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 AKR1B15C9JRZ8 316 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-249ENST00000564606 PRPF3O43395 683 aaKnown RBP8.69□□□□□ -1.02
ATXN3-249ENST00000564606 KIF5CO60282 957 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 MBD4O95243 580 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 CYP19A1P11511 503 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-249ENST00000564606 FGFR2P21802 821 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 MARCKSP29966 332 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-249ENST00000564606 PLCD1P51178 756 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 CBX1P83916 185 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 SPATA1Q5VX52 437 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 ZNF34Q8IZ26 560 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 CRACR2BQ8N4Y2 399 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-249ENST00000564606 MAGEB6Q8N7X4 407 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 VGLL2Q8N8G2 317 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 IQUBQ8NA54 791 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 FANCBQ8NB91 859 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 EHBP1Q8NDI1 1231 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 CTCFLQ8NI51 663 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-249ENST00000564606 NOC3LQ8WTT2 800 aaKnown RBP8.69□□□□□ -1.02
ATXN3-249ENST00000564606 MAP3K14Q99558 947 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 BRIP1Q9BX63 1249 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 GREM2Q9H772 168 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 MAGEF1Q9HAY2 307 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 STRN4Q9NRL3 753 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 ZNHIT6Q9NWK9 470 aaKnown RBP8.69□□□□□ -1.02
ATXN3-249ENST00000564606 TTF2Q9UNY4 1162 aaKnown RBP8.69□□□□□ -1.02
ATXN3-249ENST00000564606 RIC1Q4ADV7 1423 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 GLI3P10071 1580 aa8.69□□□□□ -1.02
ATXN3-249ENST00000564606 MAGEB6P1A0A0J9YX57 407 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 LAD1O00515 517 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 EIF3JO75822 258 aaKnown RBP8.68□□□□□ -1.02
ATXN3-249ENST00000564606 SLFN14P0C7P3 912 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 POTEJP0CG39 1038 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 C7P10643 843 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-249ENST00000564606 PDE4BQ07343 736 aa8.68□□□□□ -1.02
ATXN3-249ENST00000564606 NTRK3Q16288 839 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms