RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 DLL1O00548 723 aa21.18■□□□□ 0.98
MAP1LC3B-204ENST00000563720 TFRCP02786 760 aaKnown RBP21.18■□□□□ 0.98
MAP1LC3B-204ENST00000563720 TMED8Q6PL24 325 aaPredicted RBP21.18■□□□□ 0.98
MAP1LC3B-204ENST00000563720 FASTKD5Q7L8L6 764 aaKnown RBP21.18■□□□□ 0.98
MAP1LC3B-204ENST00000563720 MIGA1Q8NAN2 632 aa21.18■□□□□ 0.98
MAP1LC3B-204ENST00000563720 CAP2P40123 477 aa21.17■□□□□ 0.98
MAP1LC3B-204ENST00000563720 FLT3LGP49771 235 aa21.17■□□□□ 0.98
MAP1LC3B-204ENST00000563720 TTF1Q15361 905 aaPredicted RBP21.17■□□□□ 0.98
MAP1LC3B-204ENST00000563720 GADL1Q6ZQY3 521 aa21.17■□□□□ 0.98
MAP1LC3B-204ENST00000563720 METTL16Q86W50 562 aaKnown RBP21.17■□□□□ 0.98
MAP1LC3B-204ENST00000563720 BCL11AQ9H165 835 aa21.17■□□□□ 0.98
MAP1LC3B-204ENST00000563720 DNAJC18Q9H819 358 aa21.17■□□□□ 0.98
MAP1LC3B-204ENST00000563720 PALD1Q9ULE6 856 aa21.17■□□□□ 0.98
MAP1LC3B-204ENST00000563720 A0A1W2PPC1 479 aa21.16■□□□□ 0.98
MAP1LC3B-204ENST00000563720 TRIM75PA6NK02 468 aa21.16■□□□□ 0.98
MAP1LC3B-204ENST00000563720 INHAP05111 366 aa21.16■□□□□ 0.98
MAP1LC3B-204ENST00000563720 ELNP15502 786 aa21.16■□□□□ 0.98
MAP1LC3B-204ENST00000563720 CERS3Q8IU89 383 aa21.16■□□□□ 0.98
MAP1LC3B-204ENST00000563720 TNPO2O14787 897 aaKnown RBP21.15■□□□□ 0.98
MAP1LC3B-204ENST00000563720 FOXP4Q8IVH2 680 aaPredicted RBP21.15■□□□□ 0.98
MAP1LC3B-204ENST00000563720 PXYLP1Q8TE99 480 aa21.15■□□□□ 0.98
MAP1LC3B-204ENST00000563720 DEFB118Q96PH6 123 aa21.15■□□□□ 0.98
MAP1LC3B-204ENST00000563720 SAP30BPQ9UHR5 308 aaKnown RBP21.15■□□□□ 0.98
MAP1LC3B-204ENST00000563720 TAOK2Q9UL54 1235 aa21.15■□□□□ 0.98
MAP1LC3B-204ENST00000563720 GOLIM4O00461 696 aa21.14■□□□□ 0.97
MAP1LC3B-204ENST00000563720 PDE6AP16499 860 aa21.14■□□□□ 0.97
MAP1LC3B-204ENST00000563720 CAPN2P17655 700 aa21.14■□□□□ 0.97
MAP1LC3B-204ENST00000563720 SMCR8Q8TEV9 937 aaPredicted RBP21.14■□□□□ 0.97
MAP1LC3B-204ENST00000563720 DNAJC2Q99543 621 aaKnown RBP21.14■□□□□ 0.97
MAP1LC3B-204ENST00000563720 RIOK1Q9BRS2 568 aaKnown RBP21.14■□□□□ 0.97
MAP1LC3B-204ENST00000563720 SLC45A1Q9Y2W3 748 aa21.14■□□□□ 0.97
MAP1LC3B-204ENST00000563720 DOCK3Q8IZD9 2030 aa21.14■□□□□ 0.97
MAP1LC3B-204ENST00000563720 MYH8P13535 1937 aa21.14■□□□□ 0.97
MAP1LC3B-204ENST00000563720 BAZ2AQ9UIF9 1905 aaKnown RBP21.14■□□□□ 0.97
MAP1LC3B-204ENST00000563720 USP5P45974 858 aa21.13■□□□□ 0.97
MAP1LC3B-204ENST00000563720 JAG1P78504 1218 aa21.13■□□□□ 0.97
MAP1LC3B-204ENST00000563720 SPP2Q13103 211 aa21.13■□□□□ 0.97
MAP1LC3B-204ENST00000563720 IRF5Q13568 498 aa21.13■□□□□ 0.97
MAP1LC3B-204ENST00000563720 SLC9C2Q5TAH2 1124 aa21.13■□□□□ 0.97
MAP1LC3B-204ENST00000563720 ZNF280CQ8ND82 737 aa21.13■□□□□ 0.97
MAP1LC3B-204ENST00000563720 EDC3Q96F86 508 aaKnown RBP21.13■□□□□ 0.97
MAP1LC3B-204ENST00000563720 LRRCC1Q9C099 1032 aa21.13■□□□□ 0.97
MAP1LC3B-204ENST00000563720 STAP2Q9UGK3 403 aa21.13■□□□□ 0.97
MAP1LC3B-204ENST00000563720 USP17L5A8MUK1 530 aa21.12■□□□□ 0.97
MAP1LC3B-204ENST00000563720 SOX1O00570 391 aaPredicted RBP21.12■□□□□ 0.97
MAP1LC3B-204ENST00000563720 SMARCA5O60264 1052 aaPredicted RBP21.12■□□□□ 0.97
MAP1LC3B-204ENST00000563720 HLA-DOAP06340 250 aa21.12■□□□□ 0.97
MAP1LC3B-204ENST00000563720 ATP5JP18859 108 aa21.12■□□□□ 0.97
MAP1LC3B-204ENST00000563720 CRACR2BQ8N4Y2 399 aaPredicted RBP21.12■□□□□ 0.97
MAP1LC3B-204ENST00000563720 LRCH3Q96II8 777 aa21.12■□□□□ 0.97
MAP1LC3B-204ENST00000563720 TBC1D2Q9BYX2 928 aa21.12■□□□□ 0.97
MAP1LC3B-204ENST00000563720 BOLA2Q9H3K6 86 aa21.12■□□□□ 0.97
MAP1LC3B-204ENST00000563720 RANBP2P49792 3224 aaKnown RBP21.12■□□□□ 0.97
MAP1LC3B-204ENST00000563720 ZNF532Q9HCE3 1301 aa21.11■□□□□ 0.97
MAP1LC3B-204ENST00000563720 MAGEB6P1A0A0J9YX57 407 aa21.11■□□□□ 0.97
MAP1LC3B-204ENST00000563720 TCRBV5S4A2TA0A5A2 114 aa21.11■□□□□ 0.97
MAP1LC3B-204ENST00000563720 SHROOM1Q2M3G4 852 aaPredicted RBP21.11■□□□□ 0.97
MAP1LC3B-204ENST00000563720 TREML2Q5T2D2 321 aa21.11■□□□□ 0.97
MAP1LC3B-204ENST00000563720 COA7Q96BR5 231 aa21.11■□□□□ 0.97
MAP1LC3B-204ENST00000563720 DCTPP1Q9H773 170 aa21.11■□□□□ 0.97
MAP1LC3B-204ENST00000563720 PAG1Q9NWQ8 432 aa21.11■□□□□ 0.97
MAP1LC3B-204ENST00000563720 AGTPBP1Q9UPW5 1226 aa21.11■□□□□ 0.97
MAP1LC3B-204ENST00000563720 PROCA1Q8NCQ7 364 aaPredicted RBP21.1■□□□□ 0.97
MAP1LC3B-204ENST00000563720 PAWRQ96IZ0 340 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3B-204ENST00000563720 HAUS7Q99871 368 aa21.1■□□□□ 0.97
MAP1LC3B-204ENST00000563720 TRIM34Q9BYJ4 488 aa21.1■□□□□ 0.97
MAP1LC3B-204ENST00000563720 PAK6Q9NQU5 681 aaPredicted RBP21.1■□□□□ 0.97
MAP1LC3B-204ENST00000563720 GDF11O95390 407 aa21.09■□□□□ 0.97
MAP1LC3B-204ENST00000563720 ASNSP08243 561 aa21.09■□□□□ 0.97
MAP1LC3B-204ENST00000563720 HMGCS2P54868 508 aa21.09■□□□□ 0.97
MAP1LC3B-204ENST00000563720 RRP1P56182 461 aaKnown RBP21.09■□□□□ 0.97
MAP1LC3B-204ENST00000563720 NECAB2Q7Z6G3 386 aa21.09■□□□□ 0.97
MAP1LC3B-204ENST00000563720 ANKRD13CQ8N6S4 541 aa21.09■□□□□ 0.97
MAP1LC3B-204ENST00000563720 WDR18Q9BV38 432 aa21.09■□□□□ 0.97
MAP1LC3B-204ENST00000563720 EHD4Q9H223 541 aa21.09■□□□□ 0.97
MAP1LC3B-204ENST00000563720 AS3MTQ9HBK9 375 aa21.09■□□□□ 0.97
MAP1LC3B-204ENST00000563720 SH3D19Q5HYK7 790 aa21.08■□□□□ 0.97
MAP1LC3B-204ENST00000563720 CRISPLD2Q9H0B8 497 aa21.08■□□□□ 0.97
MAP1LC3B-204ENST00000563720 GINM1Q9NU53 330 aa21.08■□□□□ 0.97
MAP1LC3B-204ENST00000563720 ZBTB21Q9ULJ3 1066 aa21.08■□□□□ 0.97
MAP1LC3B-204ENST00000563720 ADD2P35612 726 aa21.07■□□□□ 0.96
MAP1LC3B-204ENST00000563720 SLFNL1Q499Z3 407 aa21.07■□□□□ 0.96
MAP1LC3B-204ENST00000563720 TATDN1Q6P1N9 297 aa21.07■□□□□ 0.96
MAP1LC3B-204ENST00000563720 TTC6Q86TZ1 520 aa21.07■□□□□ 0.96
MAP1LC3B-204ENST00000563720 LCORLQ8N3X6 602 aa21.07■□□□□ 0.96
MAP1LC3B-204ENST00000563720 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.07■□□□□ 0.96
MAP1LC3B-204ENST00000563720 SERPINB13Q9UIV8 391 aa21.07■□□□□ 0.96
MAP1LC3B-204ENST00000563720 PNMA3Q9UL41 463 aa21.07■□□□□ 0.96
MAP1LC3B-204ENST00000563720 PCDHB15Q9Y5E8 787 aa21.07■□□□□ 0.96
MAP1LC3B-204ENST00000563720 MTMR2Q13614 643 aa21.06■□□□□ 0.96
MAP1LC3B-204ENST00000563720 C7orf61Q8IZ16 206 aa21.06■□□□□ 0.96
MAP1LC3B-204ENST00000563720 DIS3LQ8TF46 1054 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3B-204ENST00000563720 CRNKL1Q9BZJ0 848 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3B-204ENST00000563720 PLCD1P51178 756 aa21.05■□□□□ 0.96
MAP1LC3B-204ENST00000563720 BACE1P56817 501 aa21.05■□□□□ 0.96
MAP1LC3B-204ENST00000563720 FAM110CQ1W6H9 321 aa21.05■□□□□ 0.96
MAP1LC3B-204ENST00000563720 YTHDC1Q96MU7 727 aaKnown RBP21.05■□□□□ 0.96
MAP1LC3B-204ENST00000563720 ECHDC1Q9NTX5 307 aa21.05■□□□□ 0.96
MAP1LC3B-204ENST00000563720 GH2P01242 217 aa21.04■□□□□ 0.96
MAP1LC3B-204ENST00000563720 CHGBP05060 677 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms