RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 TTC6Q86TZ1 520 aa15.22■□□□□ 0.03
PKM-208ENST00000563275 LCORLQ8N3X6 602 aa15.22■□□□□ 0.03
PKM-208ENST00000563275 AS3MTQ9HBK9 375 aa15.22■□□□□ 0.03
PKM-208ENST00000563275 ECHDC1Q9NTX5 307 aa15.22■□□□□ 0.03
PKM-208ENST00000563275 KIAA0100Q14667 2235 aaKnown RBP15.22■□□□□ 0.03
PKM-208ENST00000563275 MYH1P12882 1939 aa15.21■□□□□ 0.03
PKM-208ENST00000563275 SHMT1P34896 483 aa15.21■□□□□ 0.03
PKM-208ENST00000563275 PLCD1P51178 756 aa15.21■□□□□ 0.03
PKM-208ENST00000563275 MTMR2Q13614 643 aa15.21■□□□□ 0.03
PKM-208ENST00000563275 UBE3CQ15386 1083 aa15.21■□□□□ 0.03
PKM-208ENST00000563275 SLFNL1Q499Z3 407 aa15.21■□□□□ 0.03
PKM-208ENST00000563275 CRNKL1Q9BZJ0 848 aaKnown RBP15.21■□□□□ 0.03
PKM-208ENST00000563275 DCP1AQ9NPI6 582 aaPredicted RBP15.21■□□□□ 0.03
PKM-208ENST00000563275 PNMA3Q9UL41 463 aa15.21■□□□□ 0.03
PKM-208ENST00000563275 TAOK2Q9UL54 1235 aa15.21■□□□□ 0.03
PKM-208ENST00000563275 PDE4DIPQ5VU43 2346 aa15.21■□□□□ 0.02
PKM-208ENST00000563275 C19orf81C9J6K1 198 aa15.2■□□□□ 0.02
PKM-208ENST00000563275 GH2P01242 217 aa15.2■□□□□ 0.02
PKM-208ENST00000563275 CHGBP05060 677 aa15.2■□□□□ 0.02
PKM-208ENST00000563275 HOXA7P31268 230 aaPredicted RBP15.2■□□□□ 0.02
PKM-208ENST00000563275 FCGRTP55899 365 aa15.2■□□□□ 0.02
PKM-208ENST00000563275 EVX2Q03828 476 aa15.2■□□□□ 0.02
PKM-208ENST00000563275 FAM110CQ1W6H9 321 aa15.2■□□□□ 0.02
PKM-208ENST00000563275 SLC4A8Q2Y0W8 1093 aa15.2■□□□□ 0.02
PKM-208ENST00000563275 SLC9C1Q4G0N8 1177 aa15.2■□□□□ 0.02
PKM-208ENST00000563275 ASCC2Q9H1I8 757 aaPredicted RBP15.2■□□□□ 0.02
PKM-208ENST00000563275 NAV1Q8NEY1 1877 aa15.19■□□□□ 0.02
PKM-208ENST00000563275 HOXD10P28358 340 aa15.19■□□□□ 0.02
PKM-208ENST00000563275 GUCY1A2P33402 732 aa15.19■□□□□ 0.02
PKM-208ENST00000563275 GCLCP48506 637 aaPredicted RBP15.19■□□□□ 0.02
PKM-208ENST00000563275 PABPC4Q13310 644 aaKnown RBP eCLIP15.19■□□□□ 0.028e-8■□□□□ 8.6
PKM-208ENST00000563275 SMCR8Q8TEV9 937 aaPredicted RBP15.19■□□□□ 0.02
PKM-208ENST00000563275 SDR42E1Q8WUS8 393 aa15.19■□□□□ 0.02
PKM-208ENST00000563275 C12orf42Q96LP6 360 aa15.19■□□□□ 0.02
PKM-208ENST00000563275 TRIM34Q9BYJ4 488 aa15.19■□□□□ 0.02
PKM-208ENST00000563275 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.19■□□□□ 0.025e-13■■□□□ 11.9
PKM-208ENST00000563275 ARMT1Q9H993 441 aa15.19■□□□□ 0.02
PKM-208ENST00000563275 EMILIN3Q9NT22 766 aa15.19■□□□□ 0.02
PKM-208ENST00000563275 MYPNQ86TC9 1320 aa15.18■□□□□ 0.02
PKM-208ENST00000563275 USP17L10C9JJH3 530 aa15.18■□□□□ 0.02
PKM-208ENST00000563275 MBD4O95243 580 aa15.18■□□□□ 0.02
PKM-208ENST00000563275 FMNL1O95466 1100 aaPredicted RBP15.18■□□□□ 0.02
PKM-208ENST00000563275 PRKCZQ05513 592 aa15.18■□□□□ 0.02
PKM-208ENST00000563275 POTEEQ6S8J3 1075 aa15.18■□□□□ 0.02
PKM-208ENST00000563275 NBPF11Q86T75 865 aa15.18■□□□□ 0.02
PKM-208ENST00000563275 ANKRD13CQ8N6S4 541 aa15.18■□□□□ 0.02
PKM-208ENST00000563275 SH3TC2Q8TF17 1288 aa15.18■□□□□ 0.02
PKM-208ENST00000563275 MORF4L1Q9UBU8 362 aa15.18■□□□□ 0.02
PKM-208ENST00000563275 MGAMO43451 1857 aa15.17■□□□□ 0.02
PKM-208ENST00000563275 PRKAB2O43741 272 aa15.17■□□□□ 0.02
PKM-208ENST00000563275 IRF5Q13568 498 aa15.17■□□□□ 0.02
PKM-208ENST00000563275 CERKLQ49MI3 558 aaPredicted RBP15.17■□□□□ 0.02
PKM-208ENST00000563275 KIAA1683Q9H0B3 1180 aa15.17■□□□□ 0.02
PKM-208ENST00000563275 ATP8A2Q9NTI2 1148 aa15.17■□□□□ 0.02
PKM-208ENST00000563275 MCM9Q9NXL9 1143 aa15.17■□□□□ 0.02
PKM-208ENST00000563275 GABRQQ9UN88 632 aa15.17■□□□□ 0.02
PKM-208ENST00000563275 SALL3Q9BXA9 1300 aa15.17■□□□□ 0.02
PKM-208ENST00000563275 POLR3DP05423 398 aaPredicted RBP15.16■□□□□ 0.02
PKM-208ENST00000563275 CYP2D6P10635 497 aa15.16■□□□□ 0.02
PKM-208ENST00000563275 EN2P19622 333 aaPredicted RBP15.16■□□□□ 0.02
PKM-208ENST00000563275 GRK4P32298 578 aa15.16■□□□□ 0.02
PKM-208ENST00000563275 ABCB5Q2M3G0 1257 aa15.16■□□□□ 0.02
PKM-208ENST00000563275 USP17L2Q6R6M4 530 aa15.16■□□□□ 0.02
PKM-208ENST00000563275 KBTBD3Q8NAB2 608 aa15.16■□□□□ 0.02
PKM-208ENST00000563275 CRBNQ96SW2 442 aa15.16■□□□□ 0.02
PKM-208ENST00000563275 PUS7LQ9H0K6 701 aaKnown RBP15.16■□□□□ 0.02
PKM-208ENST00000563275 BCL11AQ9H165 835 aa15.16■□□□□ 0.02
PKM-208ENST00000563275 TMOD4Q9NZQ9 345 aa15.16■□□□□ 0.02
PKM-208ENST00000563275 SMIM22K7EJ46 135 aa15.15■□□□□ 0.02
PKM-208ENST00000563275 ECM2O94769 699 aaPredicted RBP15.15■□□□□ 0.02
PKM-208ENST00000563275 FLT3LGP49771 235 aa15.15■□□□□ 0.02
PKM-208ENST00000563275 C12orf60Q5U649 245 aa15.15■□□□□ 0.02
PKM-208ENST00000563275 TSHZ3Q63HK5 1081 aa15.15■□□□□ 0.02
PKM-208ENST00000563275 ZSCAN25Q6NSZ9 544 aa15.15■□□□□ 0.02
PKM-208ENST00000563275 SLC44A5Q8NCS7 719 aa15.15■□□□□ 0.02
PKM-208ENST00000563275 PI4K2BQ8TCG2 481 aa15.15■□□□□ 0.02
PKM-208ENST00000563275 RAET1EQ8TD07 263 aa15.15■□□□□ 0.02
PKM-208ENST00000563275 ACER1Q8TDN7 264 aa15.15■□□□□ 0.02
PKM-208ENST00000563275 OTUD7AQ8TE49 926 aaPredicted RBP15.15■□□□□ 0.02
PKM-208ENST00000563275 P2RX7Q99572 595 aaKnown RBP15.15■□□□□ 0.02
PKM-208ENST00000563275 MYH7P12883 1935 aa15.15■□□□□ 0.02
PKM-208ENST00000563275 TTC41PQ6P2S7 1318 aa15.15■□□□□ 0.02
PKM-208ENST00000563275 TNPO2O14787 897 aaKnown RBP15.14■□□□□ 0.01
PKM-208ENST00000563275 HERVK_113P62684 666 aa15.14■□□□□ 0.01
PKM-208ENST00000563275 HDAC1Q13547 482 aaPredicted RBP15.14■□□□□ 0.01
PKM-208ENST00000563275 SLAIN1Q8ND83 568 aa15.14■□□□□ 0.01
PKM-208ENST00000563275 PXYLP1Q8TE99 480 aa15.14■□□□□ 0.01
PKM-208ENST00000563275 GPATCH3Q96I76 525 aa15.14■□□□□ 0.01
PKM-208ENST00000563275 STRBPQ96SI9 672 aaKnown RBP15.14■□□□□ 0.01
PKM-208ENST00000563275 TXNRD2Q9NNW7 524 aa15.14■□□□□ 0.01
PKM-208ENST00000563275 SWAP70Q9UH65 585 aa15.14■□□□□ 0.01
PKM-208ENST00000563275 GJD2Q9UKL4 321 aa15.14■□□□□ 0.01
PKM-208ENST00000563275 IRX3P78415 501 aaPredicted RBP15.13■□□□□ 0.01
PKM-208ENST00000563275 SEPT2Q15019 361 aa15.13■□□□□ 0.01
PKM-208ENST00000563275 MTFR1Q15390 333 aa15.13■□□□□ 0.01
PKM-208ENST00000563275 SIAH1Q8IUQ4 282 aa15.13■□□□□ 0.01
PKM-208ENST00000563275 OSBP2Q969R2 916 aa15.13■□□□□ 0.01
PKM-208ENST00000563275 SHISA4Q96DD7 197 aa15.13■□□□□ 0.01
PKM-208ENST00000563275 DYNLL2Q96FJ2 89 aa15.13■□□□□ 0.01
PKM-208ENST00000563275 TMEM106CQ9BVX2 250 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms