RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 NOLC1Q14978 699 aaKnown RBP eCLIP8.43□□□□□ -1.06
SCAPER-205ENST00000562948 RCSD1Q6JBY9 416 aa8.43□□□□□ -1.06
SCAPER-205ENST00000562948 NECAB1Q8N987 351 aa8.43□□□□□ -1.06
SCAPER-205ENST00000562948 FAM217BQ9NTX9 383 aaPredicted RBP8.43□□□□□ -1.06
SCAPER-205ENST00000562948 TNNT3P45378 269 aaPredicted RBP8.43□□□□□ -1.06
SCAPER-205ENST00000562948 FMR1Q06787 632 aaKnown RBP eCLIP8.43□□□□□ -1.06
SCAPER-205ENST00000562948 PRAMEF18Q5VWM3 479 aa8.43□□□□□ -1.06
SCAPER-205ENST00000562948 CALCOCO1Q9P1Z2 691 aa8.43□□□□□ -1.06
SCAPER-205ENST00000562948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.43□□□□□ -1.06
SCAPER-205ENST00000562948 VCANP13611 3396 aa8.43□□□□□ -1.06
SCAPER-205ENST00000562948 RPS6KB1P23443 525 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 EPS15P42566 896 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 GABPAQ06546 454 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 ALX1Q15699 326 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 DZIP1Q86YF9 867 aaKnown RBP8.42□□□□□ -1.06
SCAPER-205ENST00000562948 SIAH1Q8IUQ4 282 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 TMX3Q96JJ7 454 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 GJB4Q9NTQ9 266 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 GNL3LQ9NVN8 582 aaKnown RBP8.42□□□□□ -1.06
SCAPER-205ENST00000562948 PTPRFP10586 1907 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 RLFQ13129 1914 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 MYH15Q9Y2K3 1946 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 CLRN2A0PK11 232 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 SPDYE2BA6NHP3 402 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 SPDYE6P0CI01 402 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 RXRAP19793 462 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 TCP10Q12799 353 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 MYL10Q9BUA6 226 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.42□□□□□ -1.06
SCAPER-205ENST00000562948 NCOA5Q9HCD5 579 aaKnown RBP8.42□□□□□ -1.06
SCAPER-205ENST00000562948 ZMYM6O95789 1325 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 APPP05067 770 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 PPARAQ07869 468 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 FAM47AQ5JRC9 791 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 C12orf60Q5U649 245 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 ARHGAP27Q6ZUM4 889 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 PIBF1Q8WXW3 757 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 TEPSINQ96N21 525 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 TSPYL1Q9H0U9 437 aa8.42□□□□□ -1.06
SCAPER-205ENST00000562948 HIP1O00291 1037 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 PICALMQ13492 652 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 TMEM39BQ9GZU3 492 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 ANAPC4Q9UJX5 808 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 ERICH4A6NGS2 130 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 K7ELQ4 463 aaPredicted RBP8.41□□□□□ -1.06
SCAPER-205ENST00000562948 GMPSP49915 693 aaPredicted RBP8.41□□□□□ -1.06
SCAPER-205ENST00000562948 ANAPC15P60006 121 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 DGKZQ13574 1117 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 CFAP100Q494V2 611 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 CMTR1Q8N1G2 835 aaKnown RBP8.41□□□□□ -1.06
SCAPER-205ENST00000562948 ROBO3Q96MS0 1386 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 SYCE3A1L190 88 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 APOBRQ0VD83 1088 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 SEC23AQ15436 765 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 Q6ZUG5 572 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 NBPF11Q86T75 865 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 CHMP4CQ96CF2 233 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 LY9Q9HBG7 655 aa8.41□□□□□ -1.06
SCAPER-205ENST00000562948 PRUNE2Q8WUY3 3088 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 MINDY4BA8MYZ0 360 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 CDC27P30260 824 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 GUCY1A2P33402 732 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 SCRN1Q12765 414 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 LRSAM1Q6UWE0 723 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 HHIPL2Q6UWX4 724 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 TRERF1Q96PN7 1200 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 RBM27Q9P2N5 1060 aaKnown RBP8.4□□□□□ -1.06
SCAPER-205ENST00000562948 WDR90Q96KV7 1748 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 KDM4AO75164 1064 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 KIAA1755Q5JYT7 1200 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 TICAM2Q86XR7 235 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 STAG1Q8WVM7 1258 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 RUFY2Q8WXA3 655 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 NEK1Q96PY6 1258 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 SERPINA10Q9UK55 444 aa8.4□□□□□ -1.06
SCAPER-205ENST00000562948 JAK2O60674 1132 aa8.4□□□□□ -1.07
SCAPER-205ENST00000562948 PRPF40AO75400 957 aaKnown RBP8.4□□□□□ -1.07
SCAPER-205ENST00000562948 SHMT1P34896 483 aa8.4□□□□□ -1.07
SCAPER-205ENST00000562948 ZNF280AP59817 542 aaPredicted RBP8.4□□□□□ -1.07
SCAPER-205ENST00000562948 CC2D2BQ6DHV5 1058 aa8.4□□□□□ -1.07
SCAPER-205ENST00000562948 CASC1Q6TDU7 716 aa8.4□□□□□ -1.07
SCAPER-205ENST00000562948 ZBTB9Q96C00 473 aa8.4□□□□□ -1.07
SCAPER-205ENST00000562948 EYA3Q99504 573 aa8.4□□□□□ -1.07
SCAPER-205ENST00000562948 MCM9Q9NXL9 1143 aa8.4□□□□□ -1.07
SCAPER-205ENST00000562948 U3KPZ7 1027 aaPredicted RBP8.4□□□□□ -1.07
SCAPER-205ENST00000562948 EPB41L2O43491 1005 aaKnown RBP8.39□□□□□ -1.07
SCAPER-205ENST00000562948 FDPSP14324 419 aaKnown RBP8.39□□□□□ -1.07
SCAPER-205ENST00000562948 RASA1P20936 1047 aa8.39□□□□□ -1.07
SCAPER-205ENST00000562948 FKBP1AP62942 108 aaKnown RBP8.39□□□□□ -1.07
SCAPER-205ENST00000562948 TBC1D10BQ4KMP7 808 aaPredicted RBP8.39□□□□□ -1.07
SCAPER-205ENST00000562948 ENAHQ8N8S7 591 aaPredicted RBP8.39□□□□□ -1.07
SCAPER-205ENST00000562948 BRF1Q92994 677 aa8.39□□□□□ -1.07
SCAPER-205ENST00000562948 TM6SF1Q9BZW5 370 aa8.39□□□□□ -1.07
SCAPER-205ENST00000562948 MYOZ2Q9NPC6 264 aa8.39□□□□□ -1.07
SCAPER-205ENST00000562948 USP40Q9NVE5 1235 aa8.39□□□□□ -1.07
SCAPER-205ENST00000562948 SLFN14P0C7P3 912 aa8.39□□□□□ -1.07
SCAPER-205ENST00000562948 MICALL2Q8IY33 904 aa8.39□□□□□ -1.07
SCAPER-205ENST00000562948 ZNF213O14771 459 aa8.39□□□□□ -1.07
SCAPER-205ENST00000562948 EVCP57679 992 aa8.39□□□□□ -1.07
SCAPER-205ENST00000562948 NUCB2P80303 420 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms