RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 CYP46A1Q9Y6A2 500 aa9.55□□□□□ -0.88
CPNE6-218ENST00000560845 PTCH2Q9Y6C5 1203 aa9.55□□□□□ -0.88
CPNE6-218ENST00000560845 TAF6LQ9Y6J9 622 aa9.55□□□□□ -0.88
CPNE6-218ENST00000560845 SLC4A4Q9Y6R1 1079 aa9.55□□□□□ -0.88
CPNE6-218ENST00000560845 MROH7-TTC4A0A0A0MT08 1334 aa9.55□□□□□ -0.88
CPNE6-218ENST00000560845 OTOFQ9HC10 1997 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 CCL15-CCL14A0A0B4J2E2 113 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 FGAP02671 866 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 LDHCP07864 332 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 TDO2P48775 406 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 GTF2A2P52657 109 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 ARHGEF6Q15052 776 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 ALX1Q15699 326 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 GRIK5Q16478 980 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 CCL15Q16663 113 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 BLOC1S2Q6QNY1 142 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.54□□□□□ -0.88
CPNE6-218ENST00000560845 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.54□□□□□ -0.88
CPNE6-218ENST00000560845 NOL10Q9BSC4 688 aaKnown RBP9.54□□□□□ -0.88
CPNE6-218ENST00000560845 CRNKL1Q9BZJ0 848 aaKnown RBP9.54□□□□□ -0.88
CPNE6-218ENST00000560845 TDRD3Q9H7E2 651 aaKnown RBP9.54□□□□□ -0.88
CPNE6-218ENST00000560845 ZFYVE28Q9HCC9 887 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 ZSWIM6Q9HCJ5 1215 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 SUGT1Q9Y2Z0 365 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 CSADQ9Y600 493 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 LAMA4Q16363 1823 aa9.54□□□□□ -0.88
CPNE6-218ENST00000560845 GSG1L2A8MUP6 293 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 TCP10L2B9ZVM9 353 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 PATL2C9JE40 543 aaKnown RBP9.53□□□□□ -0.88
CPNE6-218ENST00000560845 PRKAB2O43741 272 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 HSP90AA1P07900 732 aaKnown RBP9.53□□□□□ -0.88
CPNE6-218ENST00000560845 CPA1P15085 419 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 RPS6KB1P23443 525 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 CRKP46108 304 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 HAND2P61296 217 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 DYNLL1P63167 89 aaKnown RBP9.53□□□□□ -0.88
CPNE6-218ENST00000560845 MAP3K9P80192 1104 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 GSE1Q14687 1217 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 DIXDC1Q155Q3 683 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 SLC4A8Q2Y0W8 1093 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 STOX1Q6ZVD7 989 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 NOL8Q76FK4 1167 aaKnown RBP9.53□□□□□ -0.88
CPNE6-218ENST00000560845 RUFY3Q7L099 469 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 NBPF11Q86T75 865 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 CERS3Q8IU89 383 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 SLF2Q8IX21 1173 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 IFNL3Q8IZI9 196 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 FAM43AQ8N2R8 423 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 OTUD5Q96G74 571 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 TTC14Q96N46 770 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 NEK1Q96PY6 1258 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 TMEM39BQ9GZU3 492 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 PDRG1Q9NUG6 133 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 AATFQ9NY61 560 aaKnown RBP eCLIP9.53□□□□□ -0.88
CPNE6-218ENST00000560845 CHMP5Q9NZZ3 219 aa9.53□□□□□ -0.88
CPNE6-218ENST00000560845 SPDYE5A6NIY4 337 aa9.52□□□□□ -0.89
CPNE6-218ENST00000560845 E7EWF7 191 aa9.52□□□□□ -0.89
CPNE6-218ENST00000560845 ZNF213O14771 459 aa9.52□□□□□ -0.89
CPNE6-218ENST00000560845 BAG3O95817 575 aa9.52□□□□□ -0.89
CPNE6-218ENST00000560845 MYCP01106 439 aaPredicted RBP9.52□□□□□ -0.89
CPNE6-218ENST00000560845 HMGB1P09429 215 aaKnown RBP9.52□□□□□ -0.89
CPNE6-218ENST00000560845 TNNI2P48788 182 aa9.52□□□□□ -0.89
CPNE6-218ENST00000560845 AK2P54819 239 aa9.52□□□□□ -0.89
CPNE6-218ENST00000560845 RALYLQ86SE5 291 aaKnown RBP9.52□□□□□ -0.89
CPNE6-218ENST00000560845 TBC1D10CQ8IV04 446 aa9.52□□□□□ -0.89
CPNE6-218ENST00000560845 SPRYD3Q8NCJ5 442 aa9.52□□□□□ -0.89
CPNE6-218ENST00000560845 SDR42E1Q8WUS8 393 aa9.52□□□□□ -0.89
CPNE6-218ENST00000560845 COLQQ9Y215 455 aaPredicted RBP9.52□□□□□ -0.89
CPNE6-218ENST00000560845 GAKO14976 1311 aa9.52□□□□□ -0.89
CPNE6-218ENST00000560845 TLR2O60603 784 aa9.51□□□□□ -0.89
CPNE6-218ENST00000560845 WDHD1O75717 1129 aaPredicted RBP9.51□□□□□ -0.89
CPNE6-218ENST00000560845 PLCG2P16885 1265 aa9.51□□□□□ -0.89
CPNE6-218ENST00000560845 BTDP43251 543 aa9.51□□□□□ -0.89
CPNE6-218ENST00000560845 ANKRD1Q15327 319 aa9.51□□□□□ -0.89
CPNE6-218ENST00000560845 GIMAP6Q6P9H5 292 aa9.51□□□□□ -0.89
CPNE6-218ENST00000560845 SH3TC2Q8TF17 1288 aa9.51□□□□□ -0.89
CPNE6-218ENST00000560845 TMX3Q96JJ7 454 aa9.51□□□□□ -0.89
CPNE6-218ENST00000560845 ARHGAP39Q9C0H5 1083 aa9.51□□□□□ -0.89
CPNE6-218ENST00000560845 ZCCHC17Q9NP64 241 aaKnown RBP9.51□□□□□ -0.89
CPNE6-218ENST00000560845 SNCAIPQ9Y6H5 919 aa9.51□□□□□ -0.89
CPNE6-218ENST00000560845 CEP290O15078 2479 aa9.51□□□□□ -0.89
CPNE6-218ENST00000560845 TRIOBPQ9H2D6 2365 aa9.51□□□□□ -0.89
CPNE6-218ENST00000560845 GPR75-ASB3A0A0A6YYF3 556 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 BTBD19C9JJ37 291 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 H0YGN5 161 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 CETPP11597 493 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 USP5P45974 858 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 CACNB3P54284 484 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 PPP4CP60510 307 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 LACTBP83111 547 aaPredicted RBP9.5□□□□□ -0.89
CPNE6-218ENST00000560845 PPARAQ07869 468 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 TRDNQ13061 729 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 COL9A3Q14050 684 aaPredicted RBP9.5□□□□□ -0.89
CPNE6-218ENST00000560845 KIF22Q14807 665 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 DHX32Q7L7V1 743 aaKnown RBP9.5□□□□□ -0.89
CPNE6-218ENST00000560845 NCOA7Q8NI08 942 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 SH3RF3Q8TEJ3 882 aaPredicted RBP9.5□□□□□ -0.89
CPNE6-218ENST00000560845 FAM163AQ96GL9 167 aaPredicted RBP9.5□□□□□ -0.89
CPNE6-218ENST00000560845 TCEANC2Q96MN5 208 aa9.5□□□□□ -0.89
CPNE6-218ENST00000560845 WRNIP1Q96S55 665 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms