RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 CYP2D7A0A087X1C5 515 aa8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 PATL2C9JE40 543 aaKnown RBP8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 CYP2D6P10635 497 aa8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 TDO2P48775 406 aa8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 TNNI2P48788 182 aa8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 ALX1Q15699 326 aa8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 SLC4A8Q2Y0W8 1093 aa8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 MAP1SQ66K74 1059 aaPredicted RBP8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 CTR9Q6PD62 1173 aa8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 DLK2Q6UY11 383 aa8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 DCPSQ96C86 337 aaKnown RBP8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 NBPF3Q9H094 633 aa8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 DEFB129Q9H1M3 183 aa8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 DNAJC18Q9H819 358 aa8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 ANO2Q9NQ90 1003 aa8.4□□□□□ -1.06
CTDSPL2-210ENST00000560834 ZMYND10O75800 440 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 FGAP02671 866 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 SLURP2P0DP57 97 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 SBK1Q52WX2 424 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 C12orf60Q5U649 245 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 KRT26Q7Z3Y9 468 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 METTL16Q86W50 562 aaKnown RBP8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 TBC1D10CQ8IV04 446 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 SULF1Q8IWU6 871 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 MAP4K1Q92918 833 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 CDCA5Q96FF9 252 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 NAPBQ9H115 298 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 EHD4Q9H223 541 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 MCM9Q9NXL9 1143 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 PALD1Q9ULE6 856 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 RBM8AQ9Y5S9 174 aaKnown RBP8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 TACC3Q9Y6A5 838 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 TAF6LQ9Y6J9 622 aa8.39□□□□□ -1.07
CTDSPL2-210ENST00000560834 PASKQ96RG2 1323 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 USP17L12C9JPN9 530 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 USP17L21D6R901 530 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 TRAF5O00463 557 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 REC8O95072 547 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 APPP05067 770 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 PLCD1P51178 756 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 GABPAQ06546 454 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 FMR1Q06787 632 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 PPARAQ07869 468 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 NBPF12Q5TAG4 269 aaPredicted RBP8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 PRAMEF18Q5VWM3 479 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 CDC37L1Q7L3B6 337 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 USP48Q86UV5 1035 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 CSRNP1Q96S65 589 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 NACAP1Q9BZK3 213 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 DHX36Q9H2U1 1008 aaKnown RBP8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 ANAPC4Q9UJX5 808 aa8.38□□□□□ -1.07
CTDSPL2-210ENST00000560834 PTPRFP10586 1907 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 NEDD4P46934 1319 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 FAM196BA6NMK8 535 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 EPB41L2O43491 1005 aaKnown RBP8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 TOMM70O94826 608 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 ITGBL1O95965 494 aaPredicted RBP8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 POLR3DP05423 398 aaPredicted RBP8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 HLA-DOAP06340 250 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 CYP21A2P08686 494 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 HAND2P61296 217 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 MAP3K10Q02779 954 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 NECTIN1Q15223 517 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 KIAA1211Q6ZU35 1233 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 C16orf86Q6ZW13 317 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 ZSCAN29Q8IWY8 852 aaPredicted RBP8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 SLC44A5Q8NCS7 719 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 SMC1BQ8NDV3 1235 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 RBM46Q8TBY0 533 aaKnown RBP8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 DYNLL2Q96FJ2 89 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 DDRGK1Q96HY6 314 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 BACH2Q9BYV9 841 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 SLC24A3Q9HC58 644 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 SERPINB13Q9UIV8 391 aa8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.37□□□□□ -1.07
CTDSPL2-210ENST00000560834 PLIN4Q96Q06 1357 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 THSD7BQ9C0I4 1608 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 LOC285556D6RIA3 1793 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 MINDY4BA8MYZ0 360 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 SLC27A2O14975 620 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 TBC1D12O60347 775 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 SHMT1P34896 483 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 HSPA4P34932 840 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 CTDSPL2Q05D32 466 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 CREB3L3Q68CJ9 461 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 STOX1Q6ZVD7 989 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 TTC6Q86TZ1 520 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 NKX2-3Q8TAU0 364 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 STAG1Q8WVM7 1258 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 KCNB2Q92953 911 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 USP26Q9BXU7 913 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 PI4KBQ9UBF8 816 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 CTNNA3Q9UI47 895 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 HERC5Q9UII4 1024 aaKnown RBP8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 FZD1Q9UP38 647 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 MYH4Q9Y623 1939 aa8.36□□□□□ -1.07
CTDSPL2-210ENST00000560834 PHF20L1A8MW92 1017 aa8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 ZNF213O14771 459 aa8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 FGRP09769 529 aa8.35□□□□□ -1.07
CTDSPL2-210ENST00000560834 RASA1P20936 1047 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms