RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 ZBTB22O15209 634 aa20.24■□□□□ 0.83
TRPM1-211ENST00000560658 PRPF3O43395 683 aaKnown RBP20.24■□□□□ 0.83
TRPM1-211ENST00000560658 BRIP1Q9BX63 1249 aa20.24■□□□□ 0.83
TRPM1-211ENST00000560658 ARGLU1Q9NWB6 273 aaPredicted RBP20.24■□□□□ 0.83
TRPM1-211ENST00000560658 FAM53CQ9NYF3 392 aa20.24■□□□□ 0.83
TRPM1-211ENST00000560658 WNK3Q9BYP7 1800 aa20.23■□□□□ 0.83
TRPM1-211ENST00000560658 TRIM75PA6NK02 468 aa20.23■□□□□ 0.83
TRPM1-211ENST00000560658 PLCD1P51178 756 aa20.23■□□□□ 0.83
TRPM1-211ENST00000560658 UBE4AQ14139 1066 aa20.23■□□□□ 0.83
TRPM1-211ENST00000560658 SPECC1LQ69YQ0 1117 aa20.23■□□□□ 0.83
TRPM1-211ENST00000560658 SYT10Q6XYQ8 523 aa20.23■□□□□ 0.83
TRPM1-211ENST00000560658 FOXP4Q8IVH2 680 aaPredicted RBP20.23■□□□□ 0.83
TRPM1-211ENST00000560658 HELBQ8NG08 1087 aaPredicted RBP20.23■□□□□ 0.83
TRPM1-211ENST00000560658 NKX2-3Q8TAU0 364 aa20.23■□□□□ 0.83
TRPM1-211ENST00000560658 MYL10Q9BUA6 226 aa20.23■□□□□ 0.83
TRPM1-211ENST00000560658 TOMM22Q9NS69 142 aa20.23■□□□□ 0.83
TRPM1-211ENST00000560658 RGS17Q9UGC6 210 aaPredicted RBP20.23■□□□□ 0.83
TRPM1-211ENST00000560658 DNAI1Q9UI46 699 aa20.23■□□□□ 0.83
TRPM1-211ENST00000560658 THRAP3Q9Y2W1 955 aaKnown RBP20.23■□□□□ 0.83
TRPM1-211ENST00000560658 MAGEB6P1A0A0J9YX57 407 aa20.22■□□□□ 0.83
TRPM1-211ENST00000560658 DDAH1O94760 285 aa20.22■□□□□ 0.83
TRPM1-211ENST00000560658 CDK11BP21127 795 aaKnown RBP20.22■□□□□ 0.83
TRPM1-211ENST00000560658 KRT2P35908 639 aa20.22■□□□□ 0.83
TRPM1-211ENST00000560658 SEC23AQ15436 765 aa20.22■□□□□ 0.83
TRPM1-211ENST00000560658 CTAGE1Q96RT6 745 aa20.22■□□□□ 0.83
TRPM1-211ENST00000560658 NAA15Q9BXJ9 866 aaKnown RBP20.22■□□□□ 0.83
TRPM1-211ENST00000560658 PDS5AQ29RF7 1337 aaKnown RBP20.22■□□□□ 0.83
TRPM1-211ENST00000560658 POLR2DO15514 142 aaKnown RBP20.21■□□□□ 0.83
TRPM1-211ENST00000560658 ACTN4O43707 911 aaKnown RBP20.21■□□□□ 0.83
TRPM1-211ENST00000560658 CAMTA2O94983 1202 aa20.21■□□□□ 0.83
TRPM1-211ENST00000560658 FGRP09769 529 aa20.21■□□□□ 0.83
TRPM1-211ENST00000560658 CYP7A1P22680 504 aa20.21■□□□□ 0.83
TRPM1-211ENST00000560658 BMS1Q14692 1282 aaKnown RBP20.21■□□□□ 0.83
TRPM1-211ENST00000560658 RRP12Q5JTH9 1297 aaKnown RBP20.21■□□□□ 0.83
TRPM1-211ENST00000560658 INTS5Q6P9B9 1019 aaKnown RBP20.21■□□□□ 0.83
TRPM1-211ENST00000560658 CATIPQ7Z7H3 387 aa20.21■□□□□ 0.83
TRPM1-211ENST00000560658 MYO5AQ9Y4I1 1855 aaKnown RBP20.21■□□□□ 0.83
TRPM1-211ENST00000560658 SLIT2O94813 1529 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 BCL9LQ86UU0 1499 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 ATP8B1O43520 1251 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 NTSR2O95665 410 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 H2AFXP16104 143 aaPredicted RBP20.2■□□□□ 0.82
TRPM1-211ENST00000560658 TRAPPC10P48553 1259 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 KMT5BQ4FZB7 885 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 ISM2Q6H9L7 571 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 IQCA1Q86XH1 822 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 DPF2Q92785 391 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 BAG1Q99933 345 aaPredicted RBP20.2■□□□□ 0.82
TRPM1-211ENST00000560658 SERTAD1Q9UHV2 236 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 NFE2L3Q9Y4A8 694 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 SPDYE4A6NLX3 237 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 CHRNDQ07001 517 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 ELF2Q15723 593 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 CLEC4GQ6UXB4 293 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 REXO1L1PQ8IX06 675 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 GSDMAQ96QA5 445 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 ZSCAN10Q96SZ4 725 aaPredicted RBP20.2■□□□□ 0.82
TRPM1-211ENST00000560658 KCNJ14Q9UNX9 436 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 TACC3Q9Y6A5 838 aa20.2■□□□□ 0.82
TRPM1-211ENST00000560658 PHLPP1O60346 1717 aa20.19■□□□□ 0.82
TRPM1-211ENST00000560658 TNKSO95271 1327 aa20.19■□□□□ 0.82
TRPM1-211ENST00000560658 EFCAB8A8MWE9 144 aa20.19■□□□□ 0.82
TRPM1-211ENST00000560658 PRKAB2O43741 272 aa20.19■□□□□ 0.82
TRPM1-211ENST00000560658 SLFN14P0C7P3 912 aa20.19■□□□□ 0.82
TRPM1-211ENST00000560658 GUCY1A2P33402 732 aa20.19■□□□□ 0.82
TRPM1-211ENST00000560658 BCAMP50895 628 aa20.19■□□□□ 0.82
TRPM1-211ENST00000560658 TUBB4BP68371 445 aa20.19■□□□□ 0.82
TRPM1-211ENST00000560658 TRIM65Q6PJ69 517 aa20.19■□□□□ 0.82
TRPM1-211ENST00000560658 PANX2Q96RD6 677 aa20.19■□□□□ 0.82
TRPM1-211ENST00000560658 PHF20Q9BVI0 1012 aa20.19■□□□□ 0.82
TRPM1-211ENST00000560658 IQSEC3Q9UPP2 1182 aaPredicted RBP20.19■□□□□ 0.82
TRPM1-211ENST00000560658 PPP2R2CQ9Y2T4 447 aa20.19■□□□□ 0.82
TRPM1-211ENST00000560658 BMP6P22004 513 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 TUBB2AQ13885 445 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 CAVIN4Q5BKX8 364 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 SPATA1Q5VX52 437 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 SH3RF1Q7Z6J0 888 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 TMEM139Q8IV31 216 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 MNS1Q8NEH6 495 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 NUP133Q8WUM0 1156 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 UBXN4Q92575 508 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 SMARCC1Q92922 1105 aaPredicted RBP20.18■□□□□ 0.82
TRPM1-211ENST00000560658 SYTL4Q96C24 671 aaPredicted RBP20.18■□□□□ 0.82
TRPM1-211ENST00000560658 TUBB2BQ9BVA1 445 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 RAI14Q9P0K7 980 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 PCDHB6Q9Y5E3 794 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 DOT1LQ8TEK3 1739 aa20.18■□□□□ 0.82
TRPM1-211ENST00000560658 A0A1B0GTH6 734 aa20.17■□□□□ 0.82
TRPM1-211ENST00000560658 CRKLP46109 303 aaKnown RBP20.17■□□□□ 0.82
TRPM1-211ENST00000560658 PDE4BQ07343 736 aa20.17■□□□□ 0.82
TRPM1-211ENST00000560658 SEMA3FQ13275 785 aa20.17■□□□□ 0.82
TRPM1-211ENST00000560658 NR1I3Q14994 352 aa20.17■□□□□ 0.82
TRPM1-211ENST00000560658 FBXO38Q6PIJ6 1188 aa20.17■□□□□ 0.82
TRPM1-211ENST00000560658 CCDC51Q96ER9 411 aa20.17■□□□□ 0.82
TRPM1-211ENST00000560658 CABP5Q9NP86 173 aa20.17■□□□□ 0.82
TRPM1-211ENST00000560658 INCENPQ9NQS7 918 aa20.17■□□□□ 0.82
TRPM1-211ENST00000560658 SEC31BQ9NQW1 1179 aa20.17■□□□□ 0.82
TRPM1-211ENST00000560658 DUOX1Q9NRD9 1551 aa20.17■□□□□ 0.82
TRPM1-211ENST00000560658 NAA30Q147X3 362 aaPredicted RBP20.16■□□□□ 0.82
TRPM1-211ENST00000560658 SF3B3Q15393 1217 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms