RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 SRRDQ9UH36 339 aa19.65■□□□□ 0.74
SPG21-211ENST00000560564 MAGEB6P1A0A0J9YX57 407 aa19.64■□□□□ 0.73
SPG21-211ENST00000560564 OSBPP22059 807 aa19.64■□□□□ 0.73
SPG21-211ENST00000560564 SLC9C1Q4G0N8 1177 aa19.64■□□□□ 0.73
SPG21-211ENST00000560564 BCL11AQ9H165 835 aa19.64■□□□□ 0.73
SPG21-211ENST00000560564 AS3MTQ9HBK9 375 aa19.64■□□□□ 0.73
SPG21-211ENST00000560564 ECM2O94769 699 aaPredicted RBP19.63■□□□□ 0.73
SPG21-211ENST00000560564 ADD2P35612 726 aa19.63■□□□□ 0.73
SPG21-211ENST00000560564 RRP1P56182 461 aaKnown RBP19.63■□□□□ 0.73
SPG21-211ENST00000560564 BACE1P56817 501 aa19.63■□□□□ 0.73
SPG21-211ENST00000560564 SLFNL1Q499Z3 407 aa19.63■□□□□ 0.73
SPG21-211ENST00000560564 LCORLQ8N3X6 602 aa19.63■□□□□ 0.73
SPG21-211ENST00000560564 SERPINB13Q9UIV8 391 aa19.63■□□□□ 0.73
SPG21-211ENST00000560564 PCDHB15Q9Y5E8 787 aa19.63■□□□□ 0.73
SPG21-211ENST00000560564 CEP290O15078 2479 aa19.63■□□□□ 0.73
SPG21-211ENST00000560564 CHGBP05060 677 aa19.62■□□□□ 0.73
SPG21-211ENST00000560564 PLCD1P51178 756 aa19.62■□□□□ 0.73
SPG21-211ENST00000560564 EVX2Q03828 476 aa19.62■□□□□ 0.73
SPG21-211ENST00000560564 GABPAQ06546 454 aa19.62■□□□□ 0.73
SPG21-211ENST00000560564 MTMR2Q13614 643 aa19.62■□□□□ 0.73
SPG21-211ENST00000560564 SMCR8Q8TEV9 937 aaPredicted RBP19.62■□□□□ 0.73
SPG21-211ENST00000560564 TRIM34Q9BYJ4 488 aa19.62■□□□□ 0.73
SPG21-211ENST00000560564 MYH8P13535 1937 aa19.62■□□□□ 0.73
SPG21-211ENST00000560564 SHMT1P34896 483 aa19.61■□□□□ 0.73
SPG21-211ENST00000560564 TTC6Q86TZ1 520 aa19.61■□□□□ 0.73
SPG21-211ENST00000560564 SH3TC2Q8TF17 1288 aa19.61■□□□□ 0.73
SPG21-211ENST00000560564 CRNKL1Q9BZJ0 848 aaKnown RBP19.61■□□□□ 0.73
SPG21-211ENST00000560564 DCP1AQ9NPI6 582 aaPredicted RBP19.61■□□□□ 0.73
SPG21-211ENST00000560564 PNMA3Q9UL41 463 aa19.61■□□□□ 0.73
SPG21-211ENST00000560564 MYPNQ86TC9 1320 aa19.6■□□□□ 0.73
SPG21-211ENST00000560564 FMNL1O95466 1100 aaPredicted RBP19.6■□□□□ 0.73
SPG21-211ENST00000560564 GH2P01242 217 aa19.6■□□□□ 0.73
SPG21-211ENST00000560564 FCGRTP55899 365 aa19.6■□□□□ 0.73
SPG21-211ENST00000560564 FAM110CQ1W6H9 321 aa19.6■□□□□ 0.73
SPG21-211ENST00000560564 NBPF11Q86T75 865 aa19.6■□□□□ 0.73
SPG21-211ENST00000560564 SDR42E1Q8WUS8 393 aa19.6■□□□□ 0.73
SPG21-211ENST00000560564 ASCC2Q9H1I8 757 aaPredicted RBP19.6■□□□□ 0.73
SPG21-211ENST00000560564 USP17L10C9JJH3 530 aa19.59■□□□□ 0.73
SPG21-211ENST00000560564 HOXA7P31268 230 aaPredicted RBP19.59■□□□□ 0.73
SPG21-211ENST00000560564 PRKCZQ05513 592 aa19.59■□□□□ 0.73
SPG21-211ENST00000560564 UBE3CQ15386 1083 aa19.59■□□□□ 0.73
SPG21-211ENST00000560564 ARMT1Q9H993 441 aa19.59■□□□□ 0.73
SPG21-211ENST00000560564 ECHDC1Q9NTX5 307 aa19.59■□□□□ 0.73
SPG21-211ENST00000560564 C19orf81C9J6K1 198 aa19.58■□□□□ 0.72
SPG21-211ENST00000560564 MBD4O95243 580 aa19.58■□□□□ 0.72
SPG21-211ENST00000560564 HOXD10P28358 340 aa19.58■□□□□ 0.72
SPG21-211ENST00000560564 PABPC4Q13310 644 aaKnown RBP eCLIP19.58■□□□□ 0.72
SPG21-211ENST00000560564 ANKRD13CQ8N6S4 541 aa19.58■□□□□ 0.72
SPG21-211ENST00000560564 EMILIN3Q9NT22 766 aa19.58■□□□□ 0.72
SPG21-211ENST00000560564 MCM9Q9NXL9 1143 aa19.58■□□□□ 0.72
SPG21-211ENST00000560564 GABRQQ9UN88 632 aa19.58■□□□□ 0.72
SPG21-211ENST00000560564 PLXNB2O15031 1838 aa19.58■□□□□ 0.72
SPG21-211ENST00000560564 PRKAB2O43741 272 aa19.57■□□□□ 0.72
SPG21-211ENST00000560564 EN2P19622 333 aaPredicted RBP19.57■□□□□ 0.72
SPG21-211ENST00000560564 GCLCP48506 637 aaPredicted RBP19.57■□□□□ 0.72
SPG21-211ENST00000560564 C12orf42Q96LP6 360 aa19.57■□□□□ 0.72
SPG21-211ENST00000560564 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.57■□□□□ 0.72
SPG21-211ENST00000560564 POLR3DP05423 398 aaPredicted RBP19.56■□□□□ 0.72
SPG21-211ENST00000560564 CYP2D6P10635 497 aa19.56■□□□□ 0.72
SPG21-211ENST00000560564 GRK4P32298 578 aa19.56■□□□□ 0.72
SPG21-211ENST00000560564 GUCY1A2P33402 732 aa19.56■□□□□ 0.72
SPG21-211ENST00000560564 MTFR1Q15390 333 aa19.56■□□□□ 0.72
SPG21-211ENST00000560564 CERKLQ49MI3 558 aaPredicted RBP19.56■□□□□ 0.72
SPG21-211ENST00000560564 TSHZ3Q63HK5 1081 aa19.56■□□□□ 0.72
SPG21-211ENST00000560564 RAET1EQ8TD07 263 aa19.56■□□□□ 0.72
SPG21-211ENST00000560564 TMOD4Q9NZQ9 345 aa19.56■□□□□ 0.72
SPG21-211ENST00000560564 MORF4L1Q9UBU8 362 aa19.56■□□□□ 0.72
SPG21-211ENST00000560564 FLT3LGP49771 235 aa19.55■□□□□ 0.72
SPG21-211ENST00000560564 ABCB5Q2M3G0 1257 aa19.55■□□□□ 0.72
SPG21-211ENST00000560564 POTEEQ6S8J3 1075 aa19.55■□□□□ 0.72
SPG21-211ENST00000560564 P2RX7Q99572 595 aaKnown RBP19.55■□□□□ 0.72
SPG21-211ENST00000560564 TMEM106CQ9BVX2 250 aa19.55■□□□□ 0.72
SPG21-211ENST00000560564 PUS7LQ9H0K6 701 aaKnown RBP19.55■□□□□ 0.72
SPG21-211ENST00000560564 ATP8A2Q9NTI2 1148 aa19.55■□□□□ 0.72
SPG21-211ENST00000560564 SMIM22K7EJ46 135 aa19.54■□□□□ 0.72
SPG21-211ENST00000560564 TNPO2O14787 897 aaKnown RBP19.54■□□□□ 0.72
SPG21-211ENST00000560564 IRF5Q13568 498 aa19.54■□□□□ 0.72
SPG21-211ENST00000560564 KBTBD3Q8NAB2 608 aa19.54■□□□□ 0.72
SPG21-211ENST00000560564 SLC44A5Q8NCS7 719 aa19.54■□□□□ 0.72
SPG21-211ENST00000560564 ACER1Q8TDN7 264 aa19.54■□□□□ 0.72
SPG21-211ENST00000560564 CRBNQ96SW2 442 aa19.54■□□□□ 0.72
SPG21-211ENST00000560564 RLFQ13129 1914 aa19.53■□□□□ 0.72
SPG21-211ENST00000560564 MYCP01106 439 aaPredicted RBP19.53■□□□□ 0.72
SPG21-211ENST00000560564 HERVK_113P62684 666 aa19.53■□□□□ 0.72
SPG21-211ENST00000560564 IRX3P78415 501 aaPredicted RBP19.53■□□□□ 0.72
SPG21-211ENST00000560564 RAB3GAP1Q15042 981 aa19.53■□□□□ 0.72
SPG21-211ENST00000560564 ZSCAN25Q6NSZ9 544 aa19.53■□□□□ 0.72
SPG21-211ENST00000560564 USP17L2Q6R6M4 530 aa19.53■□□□□ 0.72
SPG21-211ENST00000560564 SLAIN1Q8ND83 568 aa19.53■□□□□ 0.72
SPG21-211ENST00000560564 OTUD7AQ8TE49 926 aaPredicted RBP19.53■□□□□ 0.72
SPG21-211ENST00000560564 KIAA1683Q9H0B3 1180 aa19.53■□□□□ 0.72
SPG21-211ENST00000560564 TXNRD2Q9NNW7 524 aa19.53■□□□□ 0.72
SPG21-211ENST00000560564 TAOK2Q9UL54 1235 aa19.53■□□□□ 0.72
SPG21-211ENST00000560564 PEX10O60683 326 aa19.52■□□□□ 0.72
SPG21-211ENST00000560564 SEPT2Q15019 361 aa19.52■□□□□ 0.72
SPG21-211ENST00000560564 C12orf60Q5U649 245 aa19.52■□□□□ 0.72
SPG21-211ENST00000560564 PI4K2BQ8TCG2 481 aa19.52■□□□□ 0.72
SPG21-211ENST00000560564 PXYLP1Q8TE99 480 aa19.52■□□□□ 0.72
SPG21-211ENST00000560564 SHISA4Q96DD7 197 aa19.52■□□□□ 0.72
SPG21-211ENST00000560564 DYNLL2Q96FJ2 89 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms