RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 GNPATO15228 680 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 MYO1BO43795 1136 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 NEMFO60524 1076 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 CUTAO60888 179 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 DDAH1O94760 285 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 GYG1P46976 350 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 GNL2Q13823 731 aaKnown RBP11.22□□□□□ -0.61
RTF1-206ENST00000560447 IQCB1Q15051 598 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 RILPL1Q5EBL4 403 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 AXDND1Q5T1B0 1012 aaPredicted RBP11.22□□□□□ -0.61
RTF1-206ENST00000560447 IQCA1Q86XH1 822 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 PLA2G4DQ86XP0 818 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 ZNF654Q8IZM8 581 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 WDR66Q8TBY9 1149 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 CELF1Q92879 486 aaKnown RBP11.22□□□□□ -0.61
RTF1-206ENST00000560447 NSUN4Q96CB9 384 aaKnown RBP11.22□□□□□ -0.61
RTF1-206ENST00000560447 MRFAP1L1Q96HT8 127 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.22□□□□□ -0.61
RTF1-206ENST00000560447 GOLPH3LQ9H4A5 285 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 ARPP21Q9UBL0 812 aaPredicted RBP11.22□□□□□ -0.61
RTF1-206ENST00000560447 ABCF2Q9UG63 623 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 CEP131Q9UPN4 1083 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 IRS2Q9Y4H2 1338 aa11.22□□□□□ -0.61
RTF1-206ENST00000560447 NAV1Q8NEY1 1877 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 SNAP23O00161 211 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 PRKAB2O43741 272 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 RANBP6O60518 1105 aaKnown RBP11.21□□□□□ -0.61
RTF1-206ENST00000560447 BMP15O95972 392 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 MMP1P03956 469 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 ZNF75DP51815 510 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 GSTO1P78417 241 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 CEBPZQ03701 1054 aaKnown RBP11.21□□□□□ -0.61
RTF1-206ENST00000560447 GRAPQ13588 217 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 PTPAQ15257 358 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 ZRSR1Q15695 479 aaKnown RBP11.21□□□□□ -0.61
RTF1-206ENST00000560447 CRACR2BQ8N4Y2 399 aaPredicted RBP11.21□□□□□ -0.61
RTF1-206ENST00000560447 FANCBQ8NB91 859 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 GRAPLQ8TC17 118 aaPredicted RBP11.21□□□□□ -0.61
RTF1-206ENST00000560447 CERKQ8TCT0 537 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 GJD4Q96KN9 370 aaPredicted RBP11.21□□□□□ -0.61
RTF1-206ENST00000560447 NAP1L5Q96NT1 182 aaPredicted RBP11.21□□□□□ -0.61
RTF1-206ENST00000560447 MAP3K14Q99558 947 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 SDF4Q9BRK5 362 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 SPTLC3Q9NUV7 552 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 KIAA1468Q9P260 1216 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 HPSEQ9Y251 543 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.21□□□□□ -0.61
RTF1-206ENST00000560447 CLIC4Q9Y696 253 aa11.21□□□□□ -0.61
RTF1-206ENST00000560447 ROBO3Q96MS0 1386 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 TNKSO95271 1327 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 XDHP47989 1333 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 KIF28PB7ZC32 967 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 PRPF3O43395 683 aaKnown RBP11.2□□□□□ -0.62
RTF1-206ENST00000560447 TM4SF1P30408 202 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 RFC4P35249 363 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 FOSBP53539 338 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 TPM4P67936 248 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 SLC27A3Q5K4L6 730 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 TRAPPC3LQ5T215 181 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 TMC4Q7Z404 712 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 CATIPQ7Z7H3 387 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 LUZP1Q86V48 1076 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 NOSTRINQ8IVI9 506 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 MIGA1Q8NAN2 632 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
RTF1-206ENST00000560447 ZSCAN10Q96SZ4 725 aaPredicted RBP11.2□□□□□ -0.62
RTF1-206ENST00000560447 SLC26A6Q9BXS9 759 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 FTOQ9C0B1 505 aaKnown RBP eCLIP11.2□□□□□ -0.62
RTF1-206ENST00000560447 DNAJC25Q9H1X3 360 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 HOOK1Q9UJC3 728 aaKnown RBP11.2□□□□□ -0.62
RTF1-206ENST00000560447 TACC3Q9Y6A5 838 aa11.2□□□□□ -0.62
RTF1-206ENST00000560447 POTEB3A0JP26 581 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 SMTNL1A8MU46 457 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 BECN2A8MW95 431 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 ZNF202O95125 648 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 POLR3DP05423 398 aaPredicted RBP11.19□□□□□ -0.62
RTF1-206ENST00000560447 LDHCP07864 332 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 NDUFA8P51970 172 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 AKAP17AQ02040 695 aaKnown RBP11.19□□□□□ -0.62
RTF1-206ENST00000560447 PDE4BQ07343 736 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 TPRNQ4KMQ1 711 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 RESP18Q5W5W9 173 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 OTUD7BQ6GQQ9 843 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 POTEBQ6S5H4 581 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 ADGRA1Q86SQ6 560 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 CCDC34Q96HJ3 373 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 TOMM22Q9NS69 142 aa11.19□□□□□ -0.62
RTF1-206ENST00000560447 TRPC5Q9UL62 973 aaPredicted RBP11.19□□□□□ -0.62
RTF1-206ENST00000560447 MINDY4BA8MYZ0 360 aa11.18□□□□□ -0.62
RTF1-206ENST00000560447 IKBKBO14920 756 aa11.18□□□□□ -0.62
RTF1-206ENST00000560447 AP5Z1O43299 807 aa11.18□□□□□ -0.62
RTF1-206ENST00000560447 HOXB1P14653 301 aaPredicted RBP11.18□□□□□ -0.62
RTF1-206ENST00000560447 PFKFB1P16118 471 aa11.18□□□□□ -0.62
RTF1-206ENST00000560447 SYKP43405 635 aa11.18□□□□□ -0.62
RTF1-206ENST00000560447 EMP3P54852 163 aa11.18□□□□□ -0.62
RTF1-206ENST00000560447 NLRP12P59046 1061 aa11.18□□□□□ -0.62
RTF1-206ENST00000560447 PPP4CP60510 307 aa11.18□□□□□ -0.62
RTF1-206ENST00000560447 MECOMQ03112 1051 aa11.18□□□□□ -0.62
RTF1-206ENST00000560447 DOK7Q18PE1 504 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms