RNA–Protein interactions for RNA: ENST00000560155.5

IPO4-211, Transcript of importin 4, humanhuman

TSL 1 (best)

Gene IPO4, Length 3,485 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-211ENST00000560155 ATP2B2Q01814 1243 aa13.62□□□□□ -0.23
IPO4-211ENST00000560155 NFIAQ12857 509 aa13.62□□□□□ -0.23
IPO4-211ENST00000560155 ZFPM1Q8IX07 1006 aa13.62□□□□□ -0.23
IPO4-211ENST00000560155 LEO1Q8WVC0 666 aaPredicted RBP13.62□□□□□ -0.23
IPO4-211ENST00000560155 TMEM87BQ96K49 555 aa13.62□□□□□ -0.23
IPO4-211ENST00000560155 DPEP1P16444 411 aa13.61□□□□□ -0.23
IPO4-211ENST00000560155 MARCKSP29966 332 aaPredicted RBP13.61□□□□□ -0.23
IPO4-211ENST00000560155 PLCB2Q00722 1185 aa13.61□□□□□ -0.23
IPO4-211ENST00000560155 DDX4Q9NQI0 724 aaKnown RBP13.61□□□□□ -0.23
IPO4-211ENST00000560155 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
IPO4-211ENST00000560155 SALL1Q9NSC2 1324 aa13.61□□□□□ -0.23
IPO4-211ENST00000560155 ECE2O60344 883 aa13.61□□□□□ -0.23
IPO4-211ENST00000560155 IQCA1Q86XH1 822 aa13.61□□□□□ -0.23
IPO4-211ENST00000560155 RBSNQ9H1K0 784 aa13.61□□□□□ -0.23
IPO4-211ENST00000560155 CLIC4Q9Y696 253 aa13.61□□□□□ -0.23
IPO4-211ENST00000560155 PPIP5K2O43314 1243 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 VPS54Q9P1Q0 977 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 LLPHQ9BRT6 129 aaKnown RBP13.6□□□□□ -0.23
IPO4-211ENST00000560155 USP40Q9NVE5 1235 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 SLX4Q8IY92 1834 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 DHX16O60231 1041 aaKnown RBP13.6□□□□□ -0.23
IPO4-211ENST00000560155 TSPY3P0CV98 308 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 TSPY8P0CW00 308 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 COL11A2P13942 1736 aaPredicted RBP13.6□□□□□ -0.23
IPO4-211ENST00000560155 ME1P48163 572 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 NR5A1Q13285 461 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 KRT40Q6A162 431 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 NBPF11Q86T75 865 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 ZSCAN29Q8IWY8 852 aaPredicted RBP13.6□□□□□ -0.23
IPO4-211ENST00000560155 FANCBQ8NB91 859 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 V9GY48 417 aaPredicted RBP13.6□□□□□ -0.23
IPO4-211ENST00000560155 FLT1P17948 1338 aa13.6□□□□□ -0.23
IPO4-211ENST00000560155 SSRP1Q08945 709 aaKnown RBP13.59□□□□□ -0.23
IPO4-211ENST00000560155 NTRK3Q16288 839 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 ATP8A2Q9NTI2 1148 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 PTMAP06454 111 aaKnown RBP13.59□□□□□ -0.23
IPO4-211ENST00000560155 PDE4BQ07343 736 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 NOM1Q5C9Z4 860 aaKnown RBP13.59□□□□□ -0.23
IPO4-211ENST00000560155 C12orf60Q5U649 245 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 TICAM2Q86XR7 235 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 DACT1Q9NYF0 836 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 BTBD18B2RXH4 712 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 RHBDL3P58872 404 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 UBE2HP62256 183 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 SEC23AQ15436 765 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 SPECC1Q5M775 1068 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 STAG2Q8N3U4 1231 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 FBXO18Q8NFZ0 1043 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 OXER1Q8TDS5 423 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 COA1Q9GZY4 146 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 VAT1LQ9HCJ6 419 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 IL17RBQ9NRM6 502 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 MRVI1Q9Y6F6 885 aa13.59□□□□□ -0.23
IPO4-211ENST00000560155 TNS1Q9HBL0 1735 aaKnown RBP13.58□□□□□ -0.23
IPO4-211ENST00000560155 NR1I2O75469 434 aa13.58□□□□□ -0.24
IPO4-211ENST00000560155 GSTO1P78417 241 aa13.58□□□□□ -0.24
IPO4-211ENST00000560155 CPLX2Q6PUV4 134 aaKnown RBP13.58□□□□□ -0.24
IPO4-211ENST00000560155 ZNF444Q8N0Y2 327 aaPredicted RBP13.58□□□□□ -0.24
IPO4-211ENST00000560155 MPHOSPH10O00566 681 aaKnown RBP13.58□□□□□ -0.24
IPO4-211ENST00000560155 ADAMTS3O15072 1205 aa13.58□□□□□ -0.24
IPO4-211ENST00000560155 LDHCP07864 332 aa13.58□□□□□ -0.24
IPO4-211ENST00000560155 EVCP57679 992 aa13.58□□□□□ -0.24
IPO4-211ENST00000560155 CATIPQ7Z7H3 387 aa13.58□□□□□ -0.24
IPO4-211ENST00000560155 ARPP21Q9UBL0 812 aaPredicted RBP13.58□□□□□ -0.24
IPO4-211ENST00000560155 CLRN2A0PK11 232 aa13.58□□□□□ -0.24
IPO4-211ENST00000560155 MBD3O95983 291 aa13.58□□□□□ -0.24
IPO4-211ENST00000560155 LIFRP42702 1097 aa13.58□□□□□ -0.24
IPO4-211ENST00000560155 SGMS1Q86VZ5 419 aa13.58□□□□□ -0.24
IPO4-211ENST00000560155 C17orf53Q8N3J3 647 aaPredicted RBP13.58□□□□□ -0.24
IPO4-211ENST00000560155 CGNQ9P2M7 1197 aaKnown RBP13.58□□□□□ -0.24
IPO4-211ENST00000560155 SF3A1Q15459 793 aaKnown RBP13.57□□□□□ -0.24
IPO4-211ENST00000560155 GPKOWQ92917 476 aaPredicted RBP eCLIP13.57□□□□□ -0.24
IPO4-211ENST00000560155 MTERF4Q7Z6M4 381 aaKnown RBP13.57□□□□□ -0.24
IPO4-211ENST00000560155 HOMER1Q86YM7 354 aa13.57□□□□□ -0.24
IPO4-211ENST00000560155 KIF3AQ9Y496 699 aa13.57□□□□□ -0.24
IPO4-211ENST00000560155 ADAMTSL1Q8N6G6 1762 aa13.57□□□□□ -0.24
IPO4-211ENST00000560155 A0A1B0GVL5 298 aa13.56□□□□□ -0.24
IPO4-211ENST00000560155 SLC3A2P08195 630 aaKnown RBP13.56□□□□□ -0.24
IPO4-211ENST00000560155 TRIM29Q14134 588 aa13.56□□□□□ -0.24
IPO4-211ENST00000560155 AMOTL1Q8IY63 956 aa13.56□□□□□ -0.24
IPO4-211ENST00000560155 LRRC47Q8N1G4 583 aaKnown RBP13.56□□□□□ -0.24
IPO4-211ENST00000560155 TDRD3Q9H7E2 651 aaKnown RBP13.56□□□□□ -0.24
IPO4-211ENST00000560155 MKRN1Q9UHC7 482 aaKnown RBP13.56□□□□□ -0.24
IPO4-211ENST00000560155 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.56□□□□□ -0.24
IPO4-211ENST00000560155 DUOX1Q9NRD9 1551 aa13.56□□□□□ -0.24
IPO4-211ENST00000560155 GPR75-ASB3A0A0A6YYF3 556 aa13.56□□□□□ -0.24
IPO4-211ENST00000560155 YDJCA8MPS7 323 aa13.56□□□□□ -0.24
IPO4-211ENST00000560155 PTMSP20962 102 aa13.56□□□□□ -0.24
IPO4-211ENST00000560155 CDK8P49336 464 aa13.56□□□□□ -0.24
IPO4-211ENST00000560155 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
IPO4-211ENST00000560155 SHISA4Q96DD7 197 aa13.56□□□□□ -0.24
IPO4-211ENST00000560155 CCDC94Q9BW85 323 aaPredicted RBP13.56□□□□□ -0.24
IPO4-211ENST00000560155 SHTN1A0MZ66 631 aa13.56□□□□□ -0.24
IPO4-211ENST00000560155 KIF23Q02241 960 aaPredicted RBP13.56□□□□□ -0.24
IPO4-211ENST00000560155 STK38Q15208 465 aa13.56□□□□□ -0.24
IPO4-211ENST00000560155 RBM26Q5T8P6 1007 aaKnown RBP13.56□□□□□ -0.24
IPO4-211ENST00000560155 CDC42EP5Q6NZY7 148 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms