RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 MAP3K10Q02779 954 aa12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 TAF7LQ5H9L4 462 aa12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 EPHA10Q5JZY3 1008 aa12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 LMBR1LQ6UX01 489 aa12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 CCAR1Q8IX12 1150 aaKnown RBP12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 C8orf58Q8NAV2 365 aa12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 ZNF280CQ8ND82 737 aa12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 EDC3Q96F86 508 aaKnown RBP12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 ATAD5Q96QE3 1844 aa12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 PAGR1Q9BTK6 254 aa12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 YBX2Q9Y2T7 364 aaKnown RBP12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 CYBAP13498 195 aa12.23□□□□□ -0.45
IGKV2D-28-202ENST00000558026 ERVK-9P63128 1117 aa12.23□□□□□ -0.45
IGKV2D-28-202ENST00000558026 ERVK-24P63145 666 aa12.23□□□□□ -0.45
IGKV2D-28-202ENST00000558026 TMEM240Q5SV17 173 aa12.23□□□□□ -0.45
IGKV2D-28-202ENST00000558026 RASIP1Q5U651 963 aa12.23□□□□□ -0.45
IGKV2D-28-202ENST00000558026 C1orf53Q5VUE5 145 aa12.23□□□□□ -0.45
IGKV2D-28-202ENST00000558026 G2E3Q7L622 706 aa12.23□□□□□ -0.45
IGKV2D-28-202ENST00000558026 NPLOC4Q8TAT6 608 aa12.23□□□□□ -0.45
IGKV2D-28-202ENST00000558026 HERVK_113Q902F9 699 aa12.23□□□□□ -0.45
IGKV2D-28-202ENST00000558026 TMEM39AQ9NV64 488 aa12.23□□□□□ -0.45
IGKV2D-28-202ENST00000558026 MSRAQ9UJ68 235 aa12.23□□□□□ -0.45
IGKV2D-28-202ENST00000558026 ZNF318Q5VUA4 2279 aa12.22□□□□□ -0.45
IGKV2D-28-202ENST00000558026 USP34Q70CQ2 3546 aa12.22□□□□□ -0.45
IGKV2D-28-202ENST00000558026 MYBBP1AQ9BQG0 1328 aaKnown RBP12.22□□□□□ -0.45
IGKV2D-28-202ENST00000558026 SPTBN4Q9H254 2564 aa12.22□□□□□ -0.45
IGKV2D-28-202ENST00000558026 RFXAPO00287 272 aa12.22□□□□□ -0.45
IGKV2D-28-202ENST00000558026 ATP2B2Q01814 1243 aa12.22□□□□□ -0.45
IGKV2D-28-202ENST00000558026 LRRC41Q15345 812 aa12.22□□□□□ -0.45
IGKV2D-28-202ENST00000558026 CCDC57Q2TAC2 916 aa12.22□□□□□ -0.45
IGKV2D-28-202ENST00000558026 CCDC30Q5VVM6 783 aa12.22□□□□□ -0.45
IGKV2D-28-202ENST00000558026 KRT40Q6A162 431 aa12.22□□□□□ -0.45
IGKV2D-28-202ENST00000558026 SLC28A3Q9HAS3 691 aa12.22□□□□□ -0.45
IGKV2D-28-202ENST00000558026 SUGT1Q9Y2Z0 365 aa12.22□□□□□ -0.45
IGKV2D-28-202ENST00000558026 TRANK1O15050 2925 aa12.21□□□□□ -0.45
IGKV2D-28-202ENST00000558026 MYH13Q9UKX3 1938 aa12.21□□□□□ -0.45
IGKV2D-28-202ENST00000558026 ST18O60284 1047 aa12.21□□□□□ -0.45
IGKV2D-28-202ENST00000558026 ACRP10323 421 aa12.21□□□□□ -0.45
IGKV2D-28-202ENST00000558026 FOXK2Q01167 660 aa12.21□□□□□ -0.45
IGKV2D-28-202ENST00000558026 RAB30Q15771 203 aa12.21□□□□□ -0.45
IGKV2D-28-202ENST00000558026 CWC22Q9HCG8 908 aaKnown RBP12.21□□□□□ -0.45
IGKV2D-28-202ENST00000558026 BRWD1Q9NSI6 2320 aa12.21□□□□□ -0.46
IGKV2D-28-202ENST00000558026 PRDX5P30044 214 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 FAAP100Q0VG06 881 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 MTMR2Q13614 643 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 RRP1BQ14684 758 aaKnown RBP12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 CAVIN4Q5BKX8 364 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 SH3D19Q5HYK7 790 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 WDR78Q5VTH9 848 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 ZNF365Q70YC5 407 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 TSPYL6Q8N831 410 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 SLC44A5Q8NCS7 719 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 MYH16Q9H6N6 1097 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 DDX4Q9NQI0 724 aaKnown RBP12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 MTCH2Q9Y6C9 303 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 A0A0G2JMZ2 1700 aa12.2□□□□□ -0.46
IGKV2D-28-202ENST00000558026 RFX7Q2KHR2 1363 aa12.19□□□□□ -0.46
IGKV2D-28-202ENST00000558026 CACNA1GO43497 2377 aa12.19□□□□□ -0.46
IGKV2D-28-202ENST00000558026 ENTPD3O75355 529 aa12.19□□□□□ -0.46
IGKV2D-28-202ENST00000558026 ZNF853P0CG23 659 aa12.19□□□□□ -0.46
IGKV2D-28-202ENST00000558026 MYOGP15173 224 aa12.19□□□□□ -0.46
IGKV2D-28-202ENST00000558026 HOXA7P31268 230 aaPredicted RBP12.19□□□□□ -0.46
IGKV2D-28-202ENST00000558026 RABGGTBP53611 331 aa12.19□□□□□ -0.46
IGKV2D-28-202ENST00000558026 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
IGKV2D-28-202ENST00000558026 FAM47AQ5JRC9 791 aa12.19□□□□□ -0.46
IGKV2D-28-202ENST00000558026 COG5Q9UP83 839 aa12.19□□□□□ -0.46
IGKV2D-28-202ENST00000558026 SMCHD1A6NHR9 2005 aa12.19□□□□□ -0.46
IGKV2D-28-202ENST00000558026 MYH2Q9UKX2 1941 aa12.18□□□□□ -0.46
IGKV2D-28-202ENST00000558026 TIMP1P01033 207 aa12.18□□□□□ -0.46
IGKV2D-28-202ENST00000558026 IGHA2P01877 340 aa12.18□□□□□ -0.46
IGKV2D-28-202ENST00000558026 CSF2RAP15509 400 aa12.18□□□□□ -0.46
IGKV2D-28-202ENST00000558026 PICALMQ13492 652 aa12.18□□□□□ -0.46
IGKV2D-28-202ENST00000558026 PRAMEF19Q5SWL8 479 aa12.18□□□□□ -0.46
IGKV2D-28-202ENST00000558026 PPP2R2DQ66LE6 453 aa12.18□□□□□ -0.46
IGKV2D-28-202ENST00000558026 IDI2Q9BXS1 227 aa12.18□□□□□ -0.46
IGKV2D-28-202ENST00000558026 PHF24Q9UPV7 400 aa12.18□□□□□ -0.46
IGKV2D-28-202ENST00000558026 CACNA1BQ00975 2339 aa12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 SLC15A5A6NIM6 579 aa12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 USP17L5A8MUK1 530 aa12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 SEPT4O43236 478 aa12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 HOXC6P09630 235 aa12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 PTPREP23469 700 aa12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 ZEB1P37275 1124 aaPredicted RBP12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 PPIGQ13427 754 aaKnown RBP eCLIP12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 MFSD5Q6N075 450 aa12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 LINS1Q8NG48 757 aa12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 HLA-CQ95604 372 aa12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 KCNH6Q9H252 994 aa12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.17□□□□□ -0.46
IGKV2D-28-202ENST00000558026 A0A1W2PQ45 241 aaPredicted RBP12.16□□□□□ -0.46
IGKV2D-28-202ENST00000558026 A0A1W2PQY0 241 aa12.16□□□□□ -0.46
IGKV2D-28-202ENST00000558026 EPOPA6NHQ4 379 aa12.16□□□□□ -0.46
IGKV2D-28-202ENST00000558026 CNMDO75829 334 aa12.16□□□□□ -0.46
IGKV2D-28-202ENST00000558026 GJD3Q8N144 294 aa12.16□□□□□ -0.46
IGKV2D-28-202ENST00000558026 OSBPL5Q9H0X9 879 aaPredicted RBP12.16□□□□□ -0.46
IGKV2D-28-202ENST00000558026 CERS4Q9HA82 394 aa12.16□□□□□ -0.46
IGKV2D-28-202ENST00000558026 TMOD4Q9NZQ9 345 aa12.16□□□□□ -0.46
IGKV2D-28-202ENST00000558026 TBX21Q9UL17 535 aa12.16□□□□□ -0.46
IGKV2D-28-202ENST00000558026 C5orf42Q9H799 3197 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms