RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ZNF112Q9UJU3 913 aa20.64■□□□□ 0.89
TUBB3-211ENST00000556536 SNX14Q9Y5W7 946 aa20.64■□□□□ 0.89
TUBB3-211ENST00000556536 PPP1R12BO60237 982 aaPredicted RBP20.63■□□□□ 0.89
TUBB3-211ENST00000556536 RASA1P20936 1047 aa20.63■□□□□ 0.89
TUBB3-211ENST00000556536 MCCP23508 829 aa20.63■□□□□ 0.89
TUBB3-211ENST00000556536 JAG1P78504 1218 aa20.63■□□□□ 0.89
TUBB3-211ENST00000556536 TTLL12Q14166 644 aaPredicted RBP20.63■□□□□ 0.89
TUBB3-211ENST00000556536 MFSD6Q6ZSS7 791 aa20.63■□□□□ 0.89
TUBB3-211ENST00000556536 TAOK2Q9UL54 1235 aa20.63■□□□□ 0.89
TUBB3-211ENST00000556536 ANGEL1Q9UNK9 670 aaKnown RBP20.63■□□□□ 0.89
TUBB3-211ENST00000556536 LAMB1P07942 1786 aa20.63■□□□□ 0.89
TUBB3-211ENST00000556536 ORC4O43929 436 aa20.62■□□□□ 0.89
TUBB3-211ENST00000556536 GDF11O95390 407 aa20.62■□□□□ 0.89
TUBB3-211ENST00000556536 INPP5BP32019 993 aa20.62■□□□□ 0.89
TUBB3-211ENST00000556536 ECE1P42892 770 aa20.62■□□□□ 0.89
TUBB3-211ENST00000556536 COL9A3Q14050 684 aaPredicted RBP20.62■□□□□ 0.89
TUBB3-211ENST00000556536 CERKLQ49MI3 558 aaPredicted RBP20.62■□□□□ 0.89
TUBB3-211ENST00000556536 RRP12Q5JTH9 1297 aaKnown RBP20.62■□□□□ 0.89
TUBB3-211ENST00000556536 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.62■□□□□ 0.89
TUBB3-211ENST00000556536 WRNIP1Q96S55 665 aa20.62■□□□□ 0.89
TUBB3-211ENST00000556536 RNF41Q9H4P4 317 aaPredicted RBP20.62■□□□□ 0.89
TUBB3-211ENST00000556536 GBA2Q9HCG7 927 aaPredicted RBP20.62■□□□□ 0.89
TUBB3-211ENST00000556536 TOMM22Q9NS69 142 aa20.62■□□□□ 0.89
TUBB3-211ENST00000556536 UBE2Q2LH0YL09 131 aa20.61■□□□□ 0.89
TUBB3-211ENST00000556536 AKR1B1P15121 316 aa20.61■□□□□ 0.89
TUBB3-211ENST00000556536 ZKSCAN1P17029 563 aaPredicted RBP20.61■□□□□ 0.89
TUBB3-211ENST00000556536 MAP3K11Q16584 847 aa20.61■□□□□ 0.89
TUBB3-211ENST00000556536 ADCK5Q3MIX3 580 aa20.61■□□□□ 0.89
TUBB3-211ENST00000556536 TSGA10IPQ3SY00 556 aa20.61■□□□□ 0.89
TUBB3-211ENST00000556536 FAM47AQ5JRC9 791 aa20.61■□□□□ 0.89
TUBB3-211ENST00000556536 ZKSCAN4Q969J2 545 aaPredicted RBP20.61■□□□□ 0.89
TUBB3-211ENST00000556536 CAPNS2Q96L46 248 aa20.61■□□□□ 0.89
TUBB3-211ENST00000556536 C22orf23Q9BZE7 217 aa20.61■□□□□ 0.89
TUBB3-211ENST00000556536 ZNF287Q9HBT7 754 aa20.61■□□□□ 0.89
TUBB3-211ENST00000556536 PCP11498 1178 aaKnown RBP20.6■□□□□ 0.89
TUBB3-211ENST00000556536 IREB2P48200 963 aaKnown RBP20.6■□□□□ 0.89
TUBB3-211ENST00000556536 MLLT1Q03111 559 aaPredicted RBP20.6■□□□□ 0.89
TUBB3-211ENST00000556536 PAXIP1Q6ZW49 1069 aaPredicted RBP20.6■□□□□ 0.89
TUBB3-211ENST00000556536 ARMC9Q7Z3E5 817 aa20.6■□□□□ 0.89
TUBB3-211ENST00000556536 ZNF444Q8N0Y2 327 aaPredicted RBP20.6■□□□□ 0.89
TUBB3-211ENST00000556536 C2orf69Q8N8R5 385 aa20.6■□□□□ 0.89
TUBB3-211ENST00000556536 LAMA4Q16363 1823 aa20.6■□□□□ 0.89
TUBB3-211ENST00000556536 B4E1Z4 1266 aa20.59■□□□□ 0.89
TUBB3-211ENST00000556536 RANBP6O60518 1105 aaKnown RBP20.59■□□□□ 0.89
TUBB3-211ENST00000556536 CAP2P40123 477 aa20.59■□□□□ 0.89
TUBB3-211ENST00000556536 FKBP1BP68106 108 aa20.59■□□□□ 0.89
TUBB3-211ENST00000556536 MAP3K9P80192 1104 aa20.59■□□□□ 0.89
TUBB3-211ENST00000556536 LDLRAD1Q5T700 205 aa20.59■□□□□ 0.89
TUBB3-211ENST00000556536 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-211ENST00000556536 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.59■□□□□ 0.89
TUBB3-211ENST00000556536 UPF2Q9HAU5 1272 aaKnown RBP20.59■□□□□ 0.89
TUBB3-211ENST00000556536 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-211ENST00000556536 CCDC85CA6NKD9 419 aa20.58■□□□□ 0.89
TUBB3-211ENST00000556536 MPHOSPH10O00566 681 aaKnown RBP20.58■□□□□ 0.89
TUBB3-211ENST00000556536 CTNND1O60716 968 aaKnown RBP20.58■□□□□ 0.89
TUBB3-211ENST00000556536 KDM4AO75164 1064 aa20.58■□□□□ 0.89
TUBB3-211ENST00000556536 GH2P01242 217 aa20.58■□□□□ 0.89
TUBB3-211ENST00000556536 TFAP4Q01664 338 aa20.58■□□□□ 0.89
TUBB3-211ENST00000556536 VGLL4Q14135 290 aa20.58■□□□□ 0.89
TUBB3-211ENST00000556536 ABCB5Q2M3G0 1257 aa20.58■□□□□ 0.89
TUBB3-211ENST00000556536 CLMNQ96JQ2 1002 aa20.58■□□□□ 0.89
TUBB3-211ENST00000556536 CCDC17Q96LX7 622 aa20.58■□□□□ 0.89
TUBB3-211ENST00000556536 KRT23Q9C075 422 aa20.58■□□□□ 0.89
TUBB3-211ENST00000556536 CNNM2Q9H8M5 875 aa20.58■□□□□ 0.89
TUBB3-211ENST00000556536 GUCY1A2P33402 732 aa20.57■□□□□ 0.88
TUBB3-211ENST00000556536 RGS19P49795 217 aa20.57■□□□□ 0.88
TUBB3-211ENST00000556536 TRDNQ13061 729 aa20.57■□□□□ 0.88
TUBB3-211ENST00000556536 KRT32Q14532 448 aa20.57■□□□□ 0.88
TUBB3-211ENST00000556536 CYP4F22Q6NT55 531 aa20.57■□□□□ 0.88
TUBB3-211ENST00000556536 CYB5R4Q7L1T6 521 aa20.57■□□□□ 0.88
TUBB3-211ENST00000556536 MB21D2Q8IYB1 491 aaPredicted RBP20.57■□□□□ 0.88
TUBB3-211ENST00000556536 SCYL3Q8IZE3 742 aa20.57■□□□□ 0.88
TUBB3-211ENST00000556536 NCOA7Q8NI08 942 aa20.57■□□□□ 0.88
TUBB3-211ENST00000556536 ESR2Q92731 530 aa20.57■□□□□ 0.88
TUBB3-211ENST00000556536 JAKMIP1Q96N16 626 aaKnown RBP20.57■□□□□ 0.88
TUBB3-211ENST00000556536 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.57■□□□□ 0.88
TUBB3-211ENST00000556536 ZSWIM5Q9P217 1185 aa20.57■□□□□ 0.88
TUBB3-211ENST00000556536 ZBTB21Q9ULJ3 1066 aa20.57■□□□□ 0.88
TUBB3-211ENST00000556536 SNCAIPQ9Y6H5 919 aa20.57■□□□□ 0.88
TUBB3-211ENST00000556536 TSPY2A6NKD2 308 aa20.56■□□□□ 0.88
TUBB3-211ENST00000556536 TSPY3P0CV98 308 aa20.56■□□□□ 0.88
TUBB3-211ENST00000556536 TSPY8P0CW00 308 aa20.56■□□□□ 0.88
TUBB3-211ENST00000556536 RBM25P49756 843 aaKnown RBP20.56■□□□□ 0.88
TUBB3-211ENST00000556536 ANAPC15P60006 121 aa20.56■□□□□ 0.88
TUBB3-211ENST00000556536 GRM1Q13255 1194 aa20.56■□□□□ 0.88
TUBB3-211ENST00000556536 NOL9Q5SY16 702 aaKnown RBP20.56■□□□□ 0.88
TUBB3-211ENST00000556536 RALYLQ86SE5 291 aaKnown RBP20.56■□□□□ 0.88
TUBB3-211ENST00000556536 CCDC84Q86UT8 332 aaPredicted RBP20.56■□□□□ 0.88
TUBB3-211ENST00000556536 ANKRD13AQ8IZ07 590 aa20.56■□□□□ 0.88
TUBB3-211ENST00000556536 NEDD1Q8NHV4 660 aa20.56■□□□□ 0.88
TUBB3-211ENST00000556536 TBC1D32Q96NH3 1257 aa20.56■□□□□ 0.88
TUBB3-211ENST00000556536 NEK1Q96PY6 1258 aa20.56■□□□□ 0.88
TUBB3-211ENST00000556536 TLL2Q9Y6L7 1015 aa20.56■□□□□ 0.88
TUBB3-211ENST00000556536 PAPPA2Q9BXP8 1791 aa20.56■□□□□ 0.88
TUBB3-211ENST00000556536 NMT2O60551 498 aa20.55■□□□□ 0.88
TUBB3-211ENST00000556536 CPA1P15085 419 aa20.55■□□□□ 0.88
TUBB3-211ENST00000556536 ANTXR2P58335 489 aa20.55■□□□□ 0.88
TUBB3-211ENST00000556536 SEPT2Q15019 361 aa20.55■□□□□ 0.88
TUBB3-211ENST00000556536 CHST3Q7LGC8 479 aa20.55■□□□□ 0.88
TUBB3-211ENST00000556536 CLEC10AQ8IUN9 316 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms