RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 PALD1Q9ULE6 856 aa11.98□□□□□ -0.49
CRX-203ENST00000556527 ZMYND8Q9ULU4 1186 aaPredicted RBP11.98□□□□□ -0.49
CRX-203ENST00000556527 FPGT-TNNI3KV9GXZ4 949 aa11.98□□□□□ -0.49
CRX-203ENST00000556527 SURF6O75683 361 aaKnown RBP11.97□□□□□ -0.49
CRX-203ENST00000556527 GLRX3O76003 335 aaKnown RBP11.97□□□□□ -0.49
CRX-203ENST00000556527 HOXA7P31268 230 aaPredicted RBP11.97□□□□□ -0.49
CRX-203ENST00000556527 RGS2P41220 211 aa11.97□□□□□ -0.49
CRX-203ENST00000556527 USP5P45974 858 aa11.97□□□□□ -0.49
CRX-203ENST00000556527 WDR78Q5VTH9 848 aa11.97□□□□□ -0.49
CRX-203ENST00000556527 FTSJ3Q8IY81 847 aaKnown RBP11.97□□□□□ -0.49
CRX-203ENST00000556527 P2RX7Q99572 595 aaKnown RBP11.97□□□□□ -0.49
CRX-203ENST00000556527 GPR108Q9NPR9 543 aa11.97□□□□□ -0.49
CRX-203ENST00000556527 GJD2Q9UKL4 321 aa11.97□□□□□ -0.49
CRX-203ENST00000556527 ZBTB21Q9ULJ3 1066 aa11.97□□□□□ -0.49
CRX-203ENST00000556527 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.97□□□□□ -0.49
CRX-203ENST00000556527 PTPRFP10586 1907 aa11.97□□□□□ -0.49
CRX-203ENST00000556527 PHIPQ8WWQ0 1821 aa11.97□□□□□ -0.49
CRX-203ENST00000556527 LOC285556D6RIA3 1793 aa11.97□□□□□ -0.49
CRX-203ENST00000556527 IGSF3O75054 1194 aa11.96□□□□□ -0.49
CRX-203ENST00000556527 IDH1O75874 414 aaKnown RBP11.96□□□□□ -0.49
CRX-203ENST00000556527 XRCC5P13010 732 aaKnown RBP11.96□□□□□ -0.49
CRX-203ENST00000556527 CYP7A1P22680 504 aa11.96□□□□□ -0.49
CRX-203ENST00000556527 PPP4CP60510 307 aa11.96□□□□□ -0.49
CRX-203ENST00000556527 CCNA1P78396 465 aa11.96□□□□□ -0.49
CRX-203ENST00000556527 TRIM32Q13049 653 aa11.96□□□□□ -0.49
CRX-203ENST00000556527 RRP1BQ14684 758 aaKnown RBP11.96□□□□□ -0.49
CRX-203ENST00000556527 ZKSCAN2Q63HK3 967 aa11.96□□□□□ -0.49
CRX-203ENST00000556527 USP17L2Q6R6M4 530 aa11.96□□□□□ -0.49
CRX-203ENST00000556527 TRIB2Q92519 343 aa11.96□□□□□ -0.49
CRX-203ENST00000556527 DBNDD2Q9BQY9 259 aa11.96□□□□□ -0.49
CRX-203ENST00000556527 RANBP2P49792 3224 aaKnown RBP11.96□□□□□ -0.49
CRX-203ENST00000556527 BCAR3O75815 825 aa11.95□□□□□ -0.5
CRX-203ENST00000556527 CYP2E1P05181 493 aaPredicted RBP11.95□□□□□ -0.5
CRX-203ENST00000556527 SYN1P17600 705 aa11.95□□□□□ -0.5
CRX-203ENST00000556527 BMP8BP34820 402 aa11.95□□□□□ -0.5
CRX-203ENST00000556527 ZAP70P43403 619 aa11.95□□□□□ -0.5
CRX-203ENST00000556527 ERVK-9P63128 1117 aa11.95□□□□□ -0.5
CRX-203ENST00000556527 ERVK-24P63145 666 aa11.95□□□□□ -0.5
CRX-203ENST00000556527 RAB3GAP1Q15042 981 aa11.95□□□□□ -0.5
CRX-203ENST00000556527 ZYXQ15942 572 aaKnown RBP11.95□□□□□ -0.5
CRX-203ENST00000556527 PLEKHH3Q7Z736 793 aa11.95□□□□□ -0.5
CRX-203ENST00000556527 LRCH3Q96II8 777 aa11.95□□□□□ -0.5
CRX-203ENST00000556527 OGDHLQ9ULD0 1010 aa11.95□□□□□ -0.5
CRX-203ENST00000556527 CCER2I3L3R5 266 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 GH2P01242 217 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 USP14P54578 494 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 GPR142Q7Z601 462 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 ADGRA1Q86SQ6 560 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 TTC6Q86TZ1 520 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 TMEM57Q8N5G2 664 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 ZNF512BQ96KM6 892 aaPredicted RBP11.94□□□□□ -0.5
CRX-203ENST00000556527 APBA2Q99767 749 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 GDF15Q99988 308 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 UBE2OQ9C0C9 1292 aaKnown RBP11.94□□□□□ -0.5
CRX-203ENST00000556527 TXNRD2Q9NNW7 524 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 CABP5Q9NP86 173 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 IVNS1ABPQ9Y6Y0 642 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 ATAD5Q96QE3 1844 aa11.94□□□□□ -0.5
CRX-203ENST00000556527 MAST2Q6P0Q8 1798 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 USP17L15C9J2P7 530 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 USP17L13C9JLJ4 530 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 USP17L11C9JVI0 530 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 USP17L18D6R9N7 530 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 USP17L22D6RA61 530 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 USP17L17D6RBQ6 530 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 USP17L19D6RCP7 530 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 USP17L20D6RJB6 530 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 SOX1O00570 391 aaPredicted RBP11.93□□□□□ -0.5
CRX-203ENST00000556527 MAGEA10P43363 369 aaPredicted RBP11.93□□□□□ -0.5
CRX-203ENST00000556527 DYNLL1P63167 89 aaKnown RBP11.93□□□□□ -0.5
CRX-203ENST00000556527 CACNB2Q08289 660 aaPredicted RBP11.93□□□□□ -0.5
CRX-203ENST00000556527 USP17L24Q0WX57 530 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 MAP3K12Q12852 859 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 POLA2Q14181 598 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 MAP3K21Q5TCX8 1036 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 MFSD14CQ5VZR4 134 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 METTL16Q86W50 562 aaKnown RBP11.93□□□□□ -0.5
CRX-203ENST00000556527 ITPRIPQ8IWB1 547 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 TDHQ8IZJ6 230 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 DEFB123Q8N688 67 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 MIGA1Q8NAN2 632 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 DNAJC18Q9H819 358 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 PIH1D3Q9NQM4 214 aaKnown RBP11.93□□□□□ -0.5
CRX-203ENST00000556527 RBPJLQ9UBG7 517 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 SERPINB13Q9UIV8 391 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 RABGAP1Q9Y3P9 1069 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 SZT2Q5T011 3432 aa11.93□□□□□ -0.5
CRX-203ENST00000556527 DLL1O00548 723 aa11.92□□□□□ -0.5
CRX-203ENST00000556527 PEX10O60683 326 aa11.92□□□□□ -0.5
CRX-203ENST00000556527 CNGA1P29973 690 aa11.92□□□□□ -0.5
CRX-203ENST00000556527 JAG1P78504 1218 aa11.92□□□□□ -0.5
CRX-203ENST00000556527 ATP8B2P98198 1209 aa11.92□□□□□ -0.5
CRX-203ENST00000556527 ABCB5Q2M3G0 1257 aa11.92□□□□□ -0.5
CRX-203ENST00000556527 SHROOM1Q2M3G4 852 aaPredicted RBP11.92□□□□□ -0.5
CRX-203ENST00000556527 CERKLQ49MI3 558 aaPredicted RBP11.92□□□□□ -0.5
CRX-203ENST00000556527 GPR153Q6NV75 609 aa11.92□□□□□ -0.5
CRX-203ENST00000556527 TMED8Q6PL24 325 aaPredicted RBP11.92□□□□□ -0.5
CRX-203ENST00000556527 MAGEB6Q8N7X4 407 aa11.92□□□□□ -0.5
CRX-203ENST00000556527 SSH3Q8TE77 659 aa11.92□□□□□ -0.5
CRX-203ENST00000556527 EDC3Q96F86 508 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms