RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 STRIP1Q5VSL9 837 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 KDF1Q8NAX2 398 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-236ENST00000556220 BANK1Q8NDB2 785 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 PLBD2Q8NHP8 589 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 CLMNQ96JQ2 1002 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 PLEKHF1Q96S99 279 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 PTPN18Q99952 460 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 DEFB129Q9H1M3 183 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 BABAM1Q9NWV8 329 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 PTCH2Q9Y6C5 1203 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 LAMB4A4D0S4 1761 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 SASH1O94885 1247 aa8.93□□□□□ -0.98
ATXN3-236ENST00000556220 KRT76Q01546 638 aa8.93□□□□□ -0.98
ATXN3-236ENST00000556220 ZNF592Q92610 1267 aa8.93□□□□□ -0.98
ATXN3-236ENST00000556220 ZBED3Q96IU2 234 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-236ENST00000556220 PCDHB9Q9Y5E1 797 aa8.93□□□□□ -0.98
ATXN3-236ENST00000556220 XDHP47989 1333 aa8.93□□□□□ -0.98
ATXN3-236ENST00000556220 MYO3BQ8WXR4 1341 aa8.93□□□□□ -0.98
ATXN3-236ENST00000556220 LRRC37AA6NMS7 1700 aa8.93□□□□□ -0.98
ATXN3-236ENST00000556220 MYCP01106 439 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-236ENST00000556220 HSP90B1P14625 803 aaKnown RBP8.92□□□□□ -0.98
ATXN3-236ENST00000556220 CCDC152Q4G0S7 254 aa8.92□□□□□ -0.98
ATXN3-236ENST00000556220 RNF20Q5VTR2 975 aa8.92□□□□□ -0.98
ATXN3-236ENST00000556220 SV2AQ7L0J3 742 aa8.92□□□□□ -0.98
ATXN3-236ENST00000556220 ZBTB38Q8NAP3 1195 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-236ENST00000556220 CNTNAP3BQ96NU0 1288 aa8.92□□□□□ -0.98
ATXN3-236ENST00000556220 COL25A1Q9BXS0 654 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-236ENST00000556220 CNTNAP3Q9BZ76 1288 aa8.92□□□□□ -0.98
ATXN3-236ENST00000556220 CYLDQ9NQC7 956 aa8.92□□□□□ -0.98
ATXN3-236ENST00000556220 LAMB2P55268 1798 aa8.91□□□□□ -0.98
ATXN3-236ENST00000556220 A0A1W2PPC1 479 aa8.91□□□□□ -0.98
ATXN3-236ENST00000556220 RNF144AP50876 292 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-236ENST00000556220 SUPT20HL1Q3ZLR7 823 aa8.91□□□□□ -0.98
ATXN3-236ENST00000556220 FOXD4L5Q5VV16 416 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-236ENST00000556220 TTLL5Q6EMB2 1281 aa8.91□□□□□ -0.98
ATXN3-236ENST00000556220 ANKRD18AQ8IVF6 992 aa8.91□□□□□ -0.98
ATXN3-236ENST00000556220 VWA5B2Q8N398 1253 aa8.91□□□□□ -0.98
ATXN3-236ENST00000556220 SH3TC2Q8TF17 1288 aa8.91□□□□□ -0.98
ATXN3-236ENST00000556220 COA1Q9GZY4 146 aa8.91□□□□□ -0.98
ATXN3-236ENST00000556220 ZFYVE28Q9HCC9 887 aa8.91□□□□□ -0.98
ATXN3-236ENST00000556220 CHPF2Q9P2E5 772 aa8.91□□□□□ -0.98
ATXN3-236ENST00000556220 PPP2R3BQ9Y5P8 575 aa8.91□□□□□ -0.98
ATXN3-236ENST00000556220 COL4A1P02462 1669 aa8.91□□□□□ -0.98
ATXN3-236ENST00000556220 USP2O75604 605 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-236ENST00000556220 IREB2P48200 963 aaKnown RBP8.9□□□□□ -0.98
ATXN3-236ENST00000556220 LYSMD3Q7Z3D4 306 aa8.9□□□□□ -0.98
ATXN3-236ENST00000556220 KIAA0825Q8IV33 1275 aa8.9□□□□□ -0.98
ATXN3-236ENST00000556220 HTATIP2Q9BUP3 242 aa8.9□□□□□ -0.98
ATXN3-236ENST00000556220 NR2E3Q9Y5X4 410 aa8.9□□□□□ -0.98
ATXN3-236ENST00000556220 KDM3BQ7LBC6 1761 aa8.9□□□□□ -0.98
ATXN3-236ENST00000556220 RBBP6Q7Z6E9 1792 aaKnown RBP8.9□□□□□ -0.98
ATXN3-236ENST00000556220 VCANP13611 3396 aa8.9□□□□□ -0.99
ATXN3-236ENST00000556220 MED23Q9ULK4 1368 aa8.89□□□□□ -0.99
ATXN3-236ENST00000556220 SOX1O00570 391 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-236ENST00000556220 ZBTB7BO15156 539 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-236ENST00000556220 PDE8AO60658 829 aa8.89□□□□□ -0.99
ATXN3-236ENST00000556220 NR1H3Q13133 447 aa8.89□□□□□ -0.99
ATXN3-236ENST00000556220 DLGAP5Q15398 846 aa8.89□□□□□ -0.99
ATXN3-236ENST00000556220 TAF1CQ15572 869 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-236ENST00000556220 NBPF12Q5TAG4 269 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-236ENST00000556220 UBE2Q1Q7Z7E8 422 aa8.89□□□□□ -0.99
ATXN3-236ENST00000556220 ANKRD13AQ8IZ07 590 aa8.89□□□□□ -0.99
ATXN3-236ENST00000556220 MTMR14Q8NCE2 650 aa8.89□□□□□ -0.99
ATXN3-236ENST00000556220 SHISA4Q96DD7 197 aa8.89□□□□□ -0.99
ATXN3-236ENST00000556220 CCDC85AQ96PX6 553 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-236ENST00000556220 PNNQ9H307 717 aaKnown RBP8.89□□□□□ -0.99
ATXN3-236ENST00000556220 MINPP1Q9UNW1 487 aa8.89□□□□□ -0.99
ATXN3-236ENST00000556220 UNC80Q8N2C7 3258 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 CDC14CA4D256 554 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 APBB1O00213 710 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 GNRH1P01148 92 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 CCT4P50991 539 aaKnown RBP8.88□□□□□ -0.99
ATXN3-236ENST00000556220 PRMT2P55345 433 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 RIPK4P57078 832 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 ERVK-9P63128 1117 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 MTFR1Q15390 333 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 KRT24Q2M2I5 525 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 TXNRD3Q86VQ6 643 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 BRI3BPQ8WY22 251 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 OPTNQ96CV9 577 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 BSDC1Q9NW68 430 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-236ENST00000556220 HYPKQ9NX55 129 aa8.88□□□□□ -0.99
ATXN3-236ENST00000556220 DBF4Q9UBU7 674 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-236ENST00000556220 COL1A1P02452 1464 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-236ENST00000556220 DDX60Q8IY21 1712 aaKnown RBP8.88□□□□□ -0.99
ATXN3-236ENST00000556220 ZNF804BA4D1E1 1349 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 MAPK8IP3Q9UPT6 1336 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 TLR2O60603 784 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 PCCAP05165 728 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-236ENST00000556220 GJB1P08034 283 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 GPC1P35052 558 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 GJA8P48165 433 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 GTF2A2P52657 109 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 GTF2IP78347 998 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 LACTBP83111 547 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-236ENST00000556220 KIF22Q14807 665 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 RNFT1Q5M7Z0 435 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 HDGFL1Q5TGJ6 251 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 CCDC191Q8NCU4 936 aa8.87□□□□□ -0.99
ATXN3-236ENST00000556220 CDC5LQ99459 802 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms