RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 USP17L5A8MUK1 530 aa16.48■□□□□ 0.23
SNX6-203ENST00000555416 POLR3DP05423 398 aaPredicted RBP16.48■□□□□ 0.23
SNX6-203ENST00000555416 NUCB1Q02818 461 aa16.48■□□□□ 0.23
SNX6-203ENST00000555416 ZSCAN25Q6NSZ9 544 aa16.48■□□□□ 0.23
SNX6-203ENST00000555416 GADL1Q6ZQY3 521 aa16.48■□□□□ 0.23
SNX6-203ENST00000555416 TTC6Q86TZ1 520 aa16.48■□□□□ 0.23
SNX6-203ENST00000555416 CHD1LQ86WJ1 897 aa16.48■□□□□ 0.23
SNX6-203ENST00000555416 CD99L2Q8TCZ2 262 aa16.48■□□□□ 0.23
SNX6-203ENST00000555416 DYNLL2Q96FJ2 89 aa16.48■□□□□ 0.23
SNX6-203ENST00000555416 SEC62Q99442 399 aaKnown RBP16.48■□□□□ 0.23
SNX6-203ENST00000555416 TRIM34Q9BYJ4 488 aa16.48■□□□□ 0.23
SNX6-203ENST00000555416 ZFYVE28Q9HCC9 887 aa16.48■□□□□ 0.23
SNX6-203ENST00000555416 ZBTB21Q9ULJ3 1066 aa16.48■□□□□ 0.23
SNX6-203ENST00000555416 GH2P01242 217 aa16.47■□□□□ 0.23
SNX6-203ENST00000555416 CYP2C8P10632 490 aa16.47■□□□□ 0.23
SNX6-203ENST00000555416 TREML2Q5T2D2 321 aa16.47■□□□□ 0.23
SNX6-203ENST00000555416 ZNF280CQ8ND82 737 aa16.47■□□□□ 0.23
SNX6-203ENST00000555416 APPBP2Q92624 585 aa16.47■□□□□ 0.23
SNX6-203ENST00000555416 ZCCHC17Q9NP64 241 aaKnown RBP16.47■□□□□ 0.23
SNX6-203ENST00000555416 ATP8A2Q9NTI2 1148 aa16.47■□□□□ 0.23
SNX6-203ENST00000555416 ZBTB47Q9UFB7 747 aaPredicted RBP16.47■□□□□ 0.23
SNX6-203ENST00000555416 SLC4A4Q9Y6R1 1079 aa16.47■□□□□ 0.23
SNX6-203ENST00000555416 ZSWIM8A7E2V4 1837 aa16.47■□□□□ 0.23
SNX6-203ENST00000555416 HTTP42858 3142 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 GSG1L2A8MUP6 293 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 USP17L12C9JPN9 530 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 USP17L21D6R901 530 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 TLR2O60603 784 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 ASNSP08243 561 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 GUCY1A2P33402 732 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 HMGCS2P54868 508 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 SP3Q02447 781 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 PLEKHM2Q8IWE5 1019 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 FSD1Q9BTV5 496 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 ARHGAP39Q9C0H5 1083 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 CPA4Q9UI42 421 aa16.46■□□□□ 0.23
SNX6-203ENST00000555416 GPAA1O43292 621 aa16.45■□□□□ 0.22
SNX6-203ENST00000555416 CTGFP29279 349 aa16.45■□□□□ 0.22
SNX6-203ENST00000555416 ZMYM1Q5SVZ6 1142 aa16.45■□□□□ 0.22
SNX6-203ENST00000555416 C12orf60Q5U649 245 aa16.45■□□□□ 0.22
SNX6-203ENST00000555416 CTR9Q6PD62 1173 aa16.45■□□□□ 0.22
SNX6-203ENST00000555416 C17orf99Q6UX52 265 aa16.45■□□□□ 0.22
SNX6-203ENST00000555416 FASTKD5Q7L8L6 764 aaKnown RBP16.45■□□□□ 0.22
SNX6-203ENST00000555416 WDR18Q9BV38 432 aa16.45■□□□□ 0.22
SNX6-203ENST00000555416 EPB41L4AQ9HCS5 686 aaPredicted RBP16.45■□□□□ 0.22
SNX6-203ENST00000555416 LOC285556D6RIA3 1793 aa16.45■□□□□ 0.22
SNX6-203ENST00000555416 ECM2O94769 699 aaPredicted RBP16.44■□□□□ 0.22
SNX6-203ENST00000555416 ZFYP08048 801 aaPredicted RBP16.44■□□□□ 0.22
SNX6-203ENST00000555416 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
SNX6-203ENST00000555416 MTMR2Q13614 643 aa16.44■□□□□ 0.22
SNX6-203ENST00000555416 CERKLQ49MI3 558 aaPredicted RBP16.44■□□□□ 0.22
SNX6-203ENST00000555416 SH3D19Q5HYK7 790 aa16.44■□□□□ 0.22
SNX6-203ENST00000555416 OTOP1Q7RTM1 612 aa16.44■□□□□ 0.22
SNX6-203ENST00000555416 AGTPBP1Q9UPW5 1226 aa16.44■□□□□ 0.22
SNX6-203ENST00000555416 FOXP2O15409 715 aa16.43■□□□□ 0.22
SNX6-203ENST00000555416 PDE4AP27815 886 aa16.43■□□□□ 0.22
SNX6-203ENST00000555416 BACE1P56817 501 aa16.43■□□□□ 0.22
SNX6-203ENST00000555416 ABCB5Q2M3G0 1257 aa16.43■□□□□ 0.22
SNX6-203ENST00000555416 CCDC129Q6ZRS4 1044 aa16.43■□□□□ 0.22
SNX6-203ENST00000555416 ACER1Q8TDN7 264 aa16.43■□□□□ 0.22
SNX6-203ENST00000555416 TRIM17Q9Y577 477 aa16.43■□□□□ 0.22
SNX6-203ENST00000555416 SEPT2Q15019 361 aa16.42■□□□□ 0.22
SNX6-203ENST00000555416 RAB3GAP1Q15042 981 aa16.42■□□□□ 0.22
SNX6-203ENST00000555416 CLEC10AQ8IUN9 316 aa16.42■□□□□ 0.22
SNX6-203ENST00000555416 PROCA1Q8NCQ7 364 aaPredicted RBP16.42■□□□□ 0.22
SNX6-203ENST00000555416 EVI5LQ96CN4 794 aa16.42■□□□□ 0.22
SNX6-203ENST00000555416 ERO1AQ96HE7 468 aa16.42■□□□□ 0.22
SNX6-203ENST00000555416 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
SNX6-203ENST00000555416 AS3MTQ9HBK9 375 aa16.42■□□□□ 0.22
SNX6-203ENST00000555416 GINM1Q9NU53 330 aa16.42■□□□□ 0.22
SNX6-203ENST00000555416 RNF216Q9NWF9 866 aaPredicted RBP16.42■□□□□ 0.22
SNX6-203ENST00000555416 CCDC85CA6NKD9 419 aa16.41■□□□□ 0.22
SNX6-203ENST00000555416 BCRP11274 1271 aa16.41■□□□□ 0.22
SNX6-203ENST00000555416 AKR1B1P15121 316 aa16.41■□□□□ 0.22
SNX6-203ENST00000555416 CDK8P49336 464 aa16.41■□□□□ 0.22
SNX6-203ENST00000555416 LACTBP83111 547 aaPredicted RBP16.41■□□□□ 0.22
SNX6-203ENST00000555416 C16orf86Q6ZW13 317 aa16.41■□□□□ 0.22
SNX6-203ENST00000555416 STK11IPQ8N1F8 1099 aa16.41■□□□□ 0.22
SNX6-203ENST00000555416 FAM227BQ96M60 508 aa16.41■□□□□ 0.22
SNX6-203ENST00000555416 PARK7Q99497 189 aaKnown RBP16.41■□□□□ 0.22
SNX6-203ENST00000555416 EMILIN3Q9NT22 766 aa16.41■□□□□ 0.22
SNX6-203ENST00000555416 HPS5Q9UPZ3 1129 aa16.41■□□□□ 0.22
SNX6-203ENST00000555416 SLC45A1Q9Y2W3 748 aa16.41■□□□□ 0.22
SNX6-203ENST00000555416 USP17L10C9JJH3 530 aa16.4■□□□□ 0.22
SNX6-203ENST00000555416 ZYXQ15942 572 aaKnown RBP16.4■□□□□ 0.22
SNX6-203ENST00000555416 SBK1Q52WX2 424 aa16.4■□□□□ 0.22
SNX6-203ENST00000555416 FBXO46Q6PJ61 603 aaPredicted RBP16.4■□□□□ 0.22
SNX6-203ENST00000555416 SIAH1Q8IUQ4 282 aa16.4■□□□□ 0.22
SNX6-203ENST00000555416 OSBPL3Q9H4L5 887 aa16.4■□□□□ 0.22
SNX6-203ENST00000555416 EFCC1Q9HA90 598 aa16.4■□□□□ 0.22
SNX6-203ENST00000555416 A0A0D9SFI3 127 aa16.39■□□□□ 0.21
SNX6-203ENST00000555416 A0A1W2PRG0 241 aa16.39■□□□□ 0.21
SNX6-203ENST00000555416 MPHOSPH10O00566 681 aaKnown RBP16.39■□□□□ 0.21
SNX6-203ENST00000555416 PEX10O60683 326 aa16.39■□□□□ 0.21
SNX6-203ENST00000555416 PKN2Q16513 984 aaKnown RBP16.39■□□□□ 0.21
SNX6-203ENST00000555416 VPS53Q5VIR6 699 aa16.39■□□□□ 0.21
SNX6-203ENST00000555416 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
SNX6-203ENST00000555416 POTEEQ6S8J3 1075 aa16.39■□□□□ 0.21
SNX6-203ENST00000555416 TRIM47Q96LD4 638 aa16.39■□□□□ 0.21
SNX6-203ENST00000555416 ASCC2Q9H1I8 757 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms