RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 DCPSQ96C86 337 aaKnown RBP12.72□□□□□ -0.37
TDP1-211ENST00000555178 IL17RBQ9NRM6 502 aa12.72□□□□□ -0.37
TDP1-211ENST00000555178 Q6ZUG5 572 aa12.72□□□□□ -0.37
TDP1-211ENST00000555178 RALYLQ86SE5 291 aaKnown RBP12.72□□□□□ -0.37
TDP1-211ENST00000555178 APOBEC3FQ8IUX4 373 aaKnown RBP12.72□□□□□ -0.37
TDP1-211ENST00000555178 NCOA7Q8NI08 942 aa12.72□□□□□ -0.37
TDP1-211ENST00000555178 CHMP4CQ96CF2 233 aa12.72□□□□□ -0.37
TDP1-211ENST00000555178 DHX36Q9H2U1 1008 aaKnown RBP12.72□□□□□ -0.37
TDP1-211ENST00000555178 PHIPQ8WWQ0 1821 aa12.71□□□□□ -0.37
TDP1-211ENST00000555178 PITPNM2Q9BZ72 1349 aa12.71□□□□□ -0.37
TDP1-211ENST00000555178 KIF3CO14782 793 aa12.71□□□□□ -0.37
TDP1-211ENST00000555178 ORC4O43929 436 aa12.71□□□□□ -0.37
TDP1-211ENST00000555178 TFAP4Q01664 338 aa12.71□□□□□ -0.37
TDP1-211ENST00000555178 DHX32Q7L7V1 743 aaKnown RBP12.71□□□□□ -0.37
TDP1-211ENST00000555178 CDCA5Q96FF9 252 aa12.71□□□□□ -0.37
TDP1-211ENST00000555178 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
TDP1-211ENST00000555178 PHF20L1A8MW92 1017 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 K7ELQ4 463 aaPredicted RBP12.7□□□□□ -0.38
TDP1-211ENST00000555178 PRC1O43663 620 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 HLA-DOAP06340 250 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 INPP5BP32019 993 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 TNNI2P48788 182 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 TATDN1Q6P1N9 297 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 RASGRP2Q7LDG7 609 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 PNMA8AQ86V59 439 aaPredicted RBP12.7□□□□□ -0.38
TDP1-211ENST00000555178 RAB11FIP4Q86YS3 637 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 CRACR2BQ8N4Y2 399 aaPredicted RBP12.7□□□□□ -0.38
TDP1-211ENST00000555178 EHD4Q9H223 541 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.7□□□□□ -0.38
TDP1-211ENST00000555178 MKNK2Q9HBH9 465 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 MAP3K10Q02779 954 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 TRDNQ13061 729 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 SULF1Q8IWU6 871 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 BRF1Q92994 677 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
TDP1-211ENST00000555178 TPCN1Q9ULQ1 816 aa12.7□□□□□ -0.38
TDP1-211ENST00000555178 TNFAIP1Q13829 316 aa12.69□□□□□ -0.38
TDP1-211ENST00000555178 BECN1Q14457 450 aa12.69□□□□□ -0.38
TDP1-211ENST00000555178 RCSD1Q6JBY9 416 aa12.69□□□□□ -0.38
TDP1-211ENST00000555178 FOXP4Q8IVH2 680 aaPredicted RBP12.69□□□□□ -0.38
TDP1-211ENST00000555178 IGDCC4Q8TDY8 1250 aa12.69□□□□□ -0.38
TDP1-211ENST00000555178 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
TDP1-211ENST00000555178 TMX3Q96JJ7 454 aa12.69□□□□□ -0.38
TDP1-211ENST00000555178 DOCK1Q14185 1865 aa12.69□□□□□ -0.38
TDP1-211ENST00000555178 TRPM7Q96QT4 1865 aa12.69□□□□□ -0.38
TDP1-211ENST00000555178 BAZ2BQ9UIF8 2168 aaKnown RBP12.69□□□□□ -0.38
TDP1-211ENST00000555178 USP2O75604 605 aaPredicted RBP12.69□□□□□ -0.38
TDP1-211ENST00000555178 MCM5P33992 734 aa12.69□□□□□ -0.38
TDP1-211ENST00000555178 PDE4BQ07343 736 aa12.69□□□□□ -0.38
TDP1-211ENST00000555178 SIAH1Q8IUQ4 282 aa12.69□□□□□ -0.38
TDP1-211ENST00000555178 AMOTL1Q8IY63 956 aa12.69□□□□□ -0.38
TDP1-211ENST00000555178 ZKSCAN4Q969J2 545 aaPredicted RBP12.69□□□□□ -0.38
TDP1-211ENST00000555178 GPBP1L1Q9HC44 474 aaPredicted RBP12.69□□□□□ -0.38
TDP1-211ENST00000555178 BRPF3Q9ULD4 1205 aa12.69□□□□□ -0.38
TDP1-211ENST00000555178 HMGB1P09429 215 aaKnown RBP12.68□□□□□ -0.38
TDP1-211ENST00000555178 APOBRQ0VD83 1088 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 ST3GAL1Q11201 340 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 SEC23AQ15436 765 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 RNF41Q9H4P4 317 aaPredicted RBP12.68□□□□□ -0.38
TDP1-211ENST00000555178 TSPY2A6NKD2 308 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 ITGBL1O95965 494 aaPredicted RBP12.68□□□□□ -0.38
TDP1-211ENST00000555178 GH2P01242 217 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 FGD1P98174 961 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 STK3Q13188 491 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 SEPT2Q15019 361 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 ME3Q16798 604 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 CERKLQ49MI3 558 aaPredicted RBP12.68□□□□□ -0.38
TDP1-211ENST00000555178 CDC37L1Q7L3B6 337 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 LDHDQ86WU2 507 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 ZNF444Q8N0Y2 327 aaPredicted RBP12.68□□□□□ -0.38
TDP1-211ENST00000555178 ENAHQ8N8S7 591 aaPredicted RBP12.68□□□□□ -0.38
TDP1-211ENST00000555178 NECAB1Q8N987 351 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 MYL10Q9BUA6 226 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 KRT23Q9C075 422 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 CNNM2Q9H8M5 875 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 ZNF408Q9H9D4 720 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 LY9Q9HBG7 655 aa12.68□□□□□ -0.38
TDP1-211ENST00000555178 TNKSO95271 1327 aa12.67□□□□□ -0.38
TDP1-211ENST00000555178 IGKV6D-41A0A0C4DH26 115 aa12.67□□□□□ -0.38
TDP1-211ENST00000555178 MPHOSPH10O00566 681 aaKnown RBP12.67□□□□□ -0.38
TDP1-211ENST00000555178 TBC1D12O60347 775 aa12.67□□□□□ -0.38
TDP1-211ENST00000555178 RXRAP19793 462 aa12.67□□□□□ -0.38
TDP1-211ENST00000555178 YY1P25490 414 aa12.67□□□□□ -0.38
TDP1-211ENST00000555178 DGKZQ13574 1117 aa12.67□□□□□ -0.38
TDP1-211ENST00000555178 ZNF784Q8NCA9 323 aaPredicted RBP12.67□□□□□ -0.38
TDP1-211ENST00000555178 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
TDP1-211ENST00000555178 ESR2Q92731 530 aa12.67□□□□□ -0.38
TDP1-211ENST00000555178 CEP95Q96GE4 821 aa12.67□□□□□ -0.38
TDP1-211ENST00000555178 SH2B2O14492 632 aaPredicted RBP12.66□□□□□ -0.38
TDP1-211ENST00000555178 SLC3A2P08195 630 aaKnown RBP12.66□□□□□ -0.38
TDP1-211ENST00000555178 TSPY3P0CV98 308 aa12.66□□□□□ -0.38
TDP1-211ENST00000555178 TSPY8P0CW00 308 aa12.66□□□□□ -0.38
TDP1-211ENST00000555178 NEDD1Q8NHV4 660 aa12.66□□□□□ -0.38
TDP1-211ENST00000555178 CLMNQ96JQ2 1002 aa12.66□□□□□ -0.38
TDP1-211ENST00000555178 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
TDP1-211ENST00000555178 SWAP70Q9UH65 585 aa12.66□□□□□ -0.38
TDP1-211ENST00000555178 HERC5Q9UII4 1024 aaKnown RBP12.66□□□□□ -0.38
TDP1-211ENST00000555178 LIMCH1Q9UPQ0 1083 aa12.66□□□□□ -0.38
TDP1-211ENST00000555178 IFIT3O14879 490 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms