RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 TSPY8P0CW00 308 aa16.9■□□□□ 0.3
SHOX2-206ENST00000554685 RASA1P20936 1047 aa16.9■□□□□ 0.3
SHOX2-206ENST00000554685 HIRAP54198 1017 aaPredicted RBP16.9■□□□□ 0.3
SHOX2-206ENST00000554685 ANTXR2P58335 489 aa16.9■□□□□ 0.3
SHOX2-206ENST00000554685 CYB5R4Q7L1T6 521 aa16.9■□□□□ 0.3
SHOX2-206ENST00000554685 CHMP4CQ96CF2 233 aa16.9■□□□□ 0.3
SHOX2-206ENST00000554685 TMEM39BQ9GZU3 492 aa16.9■□□□□ 0.3
SHOX2-206ENST00000554685 DEFB129Q9H1M3 183 aa16.9■□□□□ 0.3
SHOX2-206ENST00000554685 TAF1DQ9H5J8 278 aaPredicted RBP16.9■□□□□ 0.3
SHOX2-206ENST00000554685 INCENPQ9NQS7 918 aa16.9■□□□□ 0.3
SHOX2-206ENST00000554685 SH2B1Q9NRF2 756 aaPredicted RBP16.9■□□□□ 0.3
SHOX2-206ENST00000554685 SCN4AP35499 1836 aa16.9■□□□□ 0.3
SHOX2-206ENST00000554685 SMIM22K7EJ46 135 aa16.89■□□□□ 0.29
SHOX2-206ENST00000554685 CAPN15O75808 1086 aa16.89■□□□□ 0.29
SHOX2-206ENST00000554685 LIFRP42702 1097 aa16.89■□□□□ 0.29
SHOX2-206ENST00000554685 TFAP4Q01664 338 aa16.89■□□□□ 0.29
SHOX2-206ENST00000554685 EVX2Q03828 476 aa16.89■□□□□ 0.29
SHOX2-206ENST00000554685 TMEM67Q5HYA8 995 aa16.89■□□□□ 0.29
SHOX2-206ENST00000554685 SULF1Q8IWU6 871 aa16.89■□□□□ 0.29
SHOX2-206ENST00000554685 SLC44A5Q8NCS7 719 aa16.89■□□□□ 0.29
SHOX2-206ENST00000554685 BRF1Q92994 677 aa16.89■□□□□ 0.29
SHOX2-206ENST00000554685 TCEANC2Q96MN5 208 aa16.89■□□□□ 0.29
SHOX2-206ENST00000554685 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.89■□□□□ 0.29
SHOX2-206ENST00000554685 TCP11L1Q9NUJ3 509 aa16.89■□□□□ 0.29
SHOX2-206ENST00000554685 SH2B2O14492 632 aaPredicted RBP16.88■□□□□ 0.29
SHOX2-206ENST00000554685 SHMT1P34896 483 aa16.88■□□□□ 0.29
SHOX2-206ENST00000554685 TOB2Q14106 344 aaPredicted RBP16.88■□□□□ 0.29
SHOX2-206ENST00000554685 WTAPQ15007 396 aa16.88■□□□□ 0.29
SHOX2-206ENST00000554685 DCAF15Q66K64 600 aa16.88■□□□□ 0.29
SHOX2-206ENST00000554685 TATDN1Q6P1N9 297 aa16.88■□□□□ 0.29
SHOX2-206ENST00000554685 CHST3Q7LGC8 479 aa16.88■□□□□ 0.29
SHOX2-206ENST00000554685 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
SHOX2-206ENST00000554685 ZSCAN10Q96SZ4 725 aaPredicted RBP16.88■□□□□ 0.29
SHOX2-206ENST00000554685 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
SHOX2-206ENST00000554685 ASTN2O75129 1339 aaPredicted RBP16.88■□□□□ 0.29
SHOX2-206ENST00000554685 PLIN4Q96Q06 1357 aa16.88■□□□□ 0.29
SHOX2-206ENST00000554685 CD2BP2O95400 341 aaKnown RBP16.87■□□□□ 0.29
SHOX2-206ENST00000554685 VEGFAP15692 232 aaPredicted RBP16.87■□□□□ 0.29
SHOX2-206ENST00000554685 CERKLQ49MI3 558 aaPredicted RBP16.87■□□□□ 0.29
SHOX2-206ENST00000554685 FAM47AQ5JRC9 791 aa16.87■□□□□ 0.29
SHOX2-206ENST00000554685 SYNE3Q6ZMZ3 975 aa16.87■□□□□ 0.29
SHOX2-206ENST00000554685 NFXL1Q6ZNB6 911 aa16.87■□□□□ 0.29
SHOX2-206ENST00000554685 SGMS1Q86VZ5 419 aa16.87■□□□□ 0.29
SHOX2-206ENST00000554685 IGDCC4Q8TDY8 1250 aa16.87■□□□□ 0.29
SHOX2-206ENST00000554685 PGAP2Q9UHJ9 254 aa16.87■□□□□ 0.29
SHOX2-206ENST00000554685 TNKSO95271 1327 aa16.87■□□□□ 0.29
SHOX2-206ENST00000554685 CCDC69A6NI79 296 aa16.86■□□□□ 0.29
SHOX2-206ENST00000554685 HSP90AA1P07900 732 aaKnown RBP16.86■□□□□ 0.29
SHOX2-206ENST00000554685 ATXN8OSP0DMR3 200 aa16.86■□□□□ 0.29
SHOX2-206ENST00000554685 EVCP57679 992 aa16.86■□□□□ 0.29
SHOX2-206ENST00000554685 MAP3K10Q02779 954 aa16.86■□□□□ 0.29
SHOX2-206ENST00000554685 SUPT20HL1Q3ZLR7 823 aa16.86■□□□□ 0.29
SHOX2-206ENST00000554685 IFIT1BQ5T764 474 aaKnown RBP16.86■□□□□ 0.29
SHOX2-206ENST00000554685 NOL8Q76FK4 1167 aaKnown RBP16.86■□□□□ 0.29
SHOX2-206ENST00000554685 DGKHQ86XP1 1220 aa16.86■□□□□ 0.29
SHOX2-206ENST00000554685 ZNF274Q96GC6 653 aaPredicted RBP16.86■□□□□ 0.29
SHOX2-206ENST00000554685 TMX3Q96JJ7 454 aa16.86■□□□□ 0.29
SHOX2-206ENST00000554685 TEPSINQ96N21 525 aa16.86■□□□□ 0.29
SHOX2-206ENST00000554685 DNAJC18Q9H819 358 aa16.86■□□□□ 0.29
SHOX2-206ENST00000554685 LY9Q9HBG7 655 aa16.86■□□□□ 0.29
SHOX2-206ENST00000554685 POTECB2RU33 542 aa16.85■□□□□ 0.29
SHOX2-206ENST00000554685 RCAN1P53805 252 aa16.85■□□□□ 0.29
SHOX2-206ENST00000554685 COL9A3Q14050 684 aaPredicted RBP16.85■□□□□ 0.29
SHOX2-206ENST00000554685 EAPPQ56P03 285 aaPredicted RBP16.85■□□□□ 0.29
SHOX2-206ENST00000554685 ZKSCAN3Q9BRR0 538 aa16.85■□□□□ 0.29
SHOX2-206ENST00000554685 CABP5Q9NP86 173 aa16.85■□□□□ 0.29
SHOX2-206ENST00000554685 GINM1Q9NU53 330 aa16.85■□□□□ 0.29
SHOX2-206ENST00000554685 KLF18A0A0U1RQI7 1052 aa16.84■□□□□ 0.29
SHOX2-206ENST00000554685 APOBRQ0VD83 1088 aa16.84■□□□□ 0.29
SHOX2-206ENST00000554685 SEC23AQ15436 765 aa16.84■□□□□ 0.29
SHOX2-206ENST00000554685 ABCB5Q2M3G0 1257 aa16.84■□□□□ 0.29
SHOX2-206ENST00000554685 TMEM179Q6ZVK1 233 aa16.84■□□□□ 0.29
SHOX2-206ENST00000554685 KRT26Q7Z3Y9 468 aa16.84■□□□□ 0.29
SHOX2-206ENST00000554685 ENAHQ8N8S7 591 aaPredicted RBP16.84■□□□□ 0.29
SHOX2-206ENST00000554685 ANKS1AQ92625 1134 aa16.84■□□□□ 0.29
SHOX2-206ENST00000554685 TPCN1Q9ULQ1 816 aa16.84■□□□□ 0.29
SHOX2-206ENST00000554685 SLC12A7Q9Y666 1083 aa16.84■□□□□ 0.29
SHOX2-206ENST00000554685 SIPA1L1O43166 1804 aa16.84■□□□□ 0.29
SHOX2-206ENST00000554685 FAM196BA6NMK8 535 aa16.83■□□□□ 0.28
SHOX2-206ENST00000554685 MPHOSPH10O00566 681 aaKnown RBP16.83■□□□□ 0.28
SHOX2-206ENST00000554685 CALM1P0DP23 149 aa16.83■□□□□ 0.28
SHOX2-206ENST00000554685 CALM2P0DP24 149 aa16.83■□□□□ 0.28
SHOX2-206ENST00000554685 CALM3P0DP25 149 aa16.83■□□□□ 0.28
SHOX2-206ENST00000554685 AKR1B1P15121 316 aa16.83■□□□□ 0.28
SHOX2-206ENST00000554685 NF2P35240 595 aa16.83■□□□□ 0.28
SHOX2-206ENST00000554685 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.28
SHOX2-206ENST00000554685 CATIPQ7Z7H3 387 aa16.83■□□□□ 0.28
SHOX2-206ENST00000554685 ZNF341Q9BYN7 854 aa16.83■□□□□ 0.28
SHOX2-206ENST00000554685 SLKQ9H2G2 1235 aaPredicted RBP16.83■□□□□ 0.28
SHOX2-206ENST00000554685 KAT14Q9H8E8 782 aa16.83■□□□□ 0.28
SHOX2-206ENST00000554685 NAP1L2Q9ULW6 460 aaPredicted RBP16.83■□□□□ 0.28
SHOX2-206ENST00000554685 IGKV6D-41A0A0C4DH26 115 aa16.82■□□□□ 0.28
SHOX2-206ENST00000554685 GOLGA8BA8MQT2 603 aa16.82■□□□□ 0.28
SHOX2-206ENST00000554685 DHX16O60231 1041 aaKnown RBP16.82■□□□□ 0.28
SHOX2-206ENST00000554685 DDAH1O94760 285 aa16.82■□□□□ 0.28
SHOX2-206ENST00000554685 CUL4AQ13619 759 aa16.82■□□□□ 0.28
SHOX2-206ENST00000554685 PPP2R5BQ15173 497 aa16.82■□□□□ 0.28
SHOX2-206ENST00000554685 ME3Q16798 604 aa16.82■□□□□ 0.28
SHOX2-206ENST00000554685 NBPF12Q5TAG4 269 aaPredicted RBP16.82■□□□□ 0.28
SHOX2-206ENST00000554685 APOA5Q6Q788 366 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms