RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 MRVI1Q9Y6F6 885 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 RTL9Q8NET4 1388 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 ABCC4O15439 1325 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 ANKRD33BA6NCL7 494 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 ERICH4A6NGS2 130 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 SMAPO00193 183 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 CD53P19397 219 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 SCNN1AP37088 669 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 ABL2P42684 1182 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 ZNF280AP59817 542 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-206ENST00000554429 MLLT1Q03111 559 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-206ENST00000554429 SF3B3Q15393 1217 aaKnown RBP3.27□□□□□ -1.89
PRPF39-206ENST00000554429 NFE2L2Q16236 605 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 PKN2Q16513 984 aaKnown RBP3.27□□□□□ -1.89
PRPF39-206ENST00000554429 SYCP2LQ5T4T6 812 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 SUSD4Q5VX71 490 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 BICDL1Q6ZP65 573 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 WDR75Q8IWA0 830 aaKnown RBP3.27□□□□□ -1.89
PRPF39-206ENST00000554429 NIM1KQ8IY84 436 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 ADAMTS19Q8TE59 1207 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 CDC5LQ99459 802 aaKnown RBP3.27□□□□□ -1.89
PRPF39-206ENST00000554429 REPIN1Q9BWE0 567 aaKnown RBP3.27□□□□□ -1.89
PRPF39-206ENST00000554429 CXorf56Q9H5V9 222 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 GOPCQ9HD26 462 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 CEP126Q9P2H0 1117 aa3.27□□□□□ -1.89
PRPF39-206ENST00000554429 TTF2Q9UNY4 1162 aaKnown RBP3.27□□□□□ -1.89
PRPF39-206ENST00000554429 TGFB3P10600 412 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 NAT1P18440 290 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 PRSS12P56730 875 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 NOGQ13253 232 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 GRAPQ13588 217 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 ARMC3Q5W041 872 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 KIF6Q6ZMV9 814 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 GRAPLQ8TC17 118 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-206ENST00000554429 RNF217Q8TC41 542 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 RTF1Q92541 710 aaKnown RBP3.26□□□□□ -1.89
PRPF39-206ENST00000554429 MKL1Q969V6 931 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 ARPC5LQ9BPX5 153 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 BACH2Q9BYV9 841 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 MUC3BQ9H195 1237 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 BSDC1Q9NW68 430 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-206ENST00000554429 DDX56Q9NY93 547 aaKnown RBP3.26□□□□□ -1.89
PRPF39-206ENST00000554429 SSC5DA1L4H1 1573 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 PRAMEF22A3QJZ6 481 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 PRC1O43663 620 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 SLC10A3P09131 477 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 FAM163BP0C2L3 166 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 IRS1P35568 1242 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 HDLBPQ00341 1268 aaKnown RBP3.26□□□□□ -1.89
PRPF39-206ENST00000554429 CXCL9Q07325 125 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 KMT5BQ4FZB7 885 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 C10orf62Q5T681 223 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-206ENST00000554429 MFSD4BQ5TF39 518 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 MAP1SQ66K74 1059 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-206ENST00000554429 EP400NLQ6ZTU2 488 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 CDC37L1Q7L3B6 337 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 ACRBPQ8NEB7 543 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 RPGRQ92834 1020 aaKnown RBP3.26□□□□□ -1.89
PRPF39-206ENST00000554429 BORCS6Q96GS4 357 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 GPR101Q96P66 508 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-206ENST00000554429 ISCA1Q9BUE6 129 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 UTP14AQ9BVJ6 771 aaKnown RBP3.26□□□□□ -1.89
PRPF39-206ENST00000554429 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 ZHX3Q9H4I2 956 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 POLR3EQ9NVU0 708 aa3.26□□□□□ -1.89
PRPF39-206ENST00000554429 SPEF2Q9C093 1822 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 VIL1P09327 827 aaKnown RBP3.25□□□□□ -1.89
PRPF39-206ENST00000554429 EPS15P42566 896 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 TNNI2P48788 182 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 HIRAP54198 1017 aaPredicted RBP3.25□□□□□ -1.89
PRPF39-206ENST00000554429 TCIRG1Q13488 830 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 CIAPIN1Q6FI81 312 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 MCOLN1Q9GZU1 580 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 CASP8AP2Q9UKL3 1982 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 PES1O00541 588 aaKnown RBP3.25□□□□□ -1.89
PRPF39-206ENST00000554429 U2AF1L5P0DN76 240 aaPredicted RBP3.25□□□□□ -1.89
PRPF39-206ENST00000554429 SERPINB4P48594 390 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 GMPSP49915 693 aaPredicted RBP3.25□□□□□ -1.89
PRPF39-206ENST00000554429 U2AF1Q01081 240 aaKnown RBP eCLIP3.25□□□□□ -1.896e-6■■■□□ 14.7
PRPF39-206ENST00000554429 FAM160A1Q05DH4 1040 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 KCTD2Q14681 263 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 E2F5Q15329 346 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 TOMM20Q15388 145 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 MCM10Q7L590 875 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 NLRP10Q86W26 655 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 PAF1Q8N7H5 531 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 AGBL3Q8NEM8 1001 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 CEP63Q96MT8 703 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 NLRP3Q96P20 1036 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 GMLQ99445 158 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 CENPOQ9BU64 300 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 SEZ6LQ9BYH1 1024 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 RYDENQ9NUL5 291 aaKnown RBP3.25□□□□□ -1.89
PRPF39-206ENST00000554429 OTOFQ9HC10 1997 aa3.25□□□□□ -1.89
PRPF39-206ENST00000554429 YDJCA8MPS7 323 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 PHF20L1A8MW92 1017 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 CHL1O00533 1208 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 PPIP5K2O43314 1243 aa3.24□□□□□ -1.89
PRPF39-206ENST00000554429 ACTN4O43707 911 aaKnown RBP3.24□□□□□ -1.89
PRPF39-206ENST00000554429 HIP1RO75146 1068 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms