RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 KRTAP9-9Q9BYP9 154 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 KRTAP9-4Q9BYQ2 154 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 CFAP74Q9C0B2 1584 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 RNF208Q9H0X6 261 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 BRMS1Q9HCU9 246 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 PICK1Q9NRD5 415 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 FANCAO15360 1455 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 DENND4BO75064 1496 aaPredicted RBP7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 ALX3O95076 343 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 APBA3O96018 575 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 SELPP16109 830 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 ATP2B1P20020 1258 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 COL8A1P27658 744 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 GK5Q6ZS86 529 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 FAM177A1Q8N128 213 aaPredicted RBP7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 C12orf50Q8NA57 414 aaPredicted RBP7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 SEC16BQ96JE7 1060 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 GMLQ99445 158 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 TMPRSS13Q9BYE2 586 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 CYP4F12Q9HCS2 524 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 AP4E1Q9UPM8 1137 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 ARHGAP35Q9NRY4 1499 aa7.3□□□□□ -1.24
MTHFD1-206ENST00000554353 RIMS1Q86UR5 1692 aaKnown RBP7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 CDK13Q14004 1512 aaKnown RBP7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 PRAMEF27A3QJZ7 478 aa7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 F8W735 103 aaPredicted RBP7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 SSBP05455 408 aaKnown RBP eCLIP7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 DRD2P14416 443 aa7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 GTF2F1P35269 517 aaKnown RBP eCLIP7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 ZNF165P49910 485 aa7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 ID3Q02535 119 aa7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 FBXW10Q5XX13 1052 aa7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 FDX2Q6P4F2 183 aa7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 MCF2L2Q86YR7 1114 aa7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 CPLX3Q8WVH0 158 aa7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 KRTAP4-12Q9BQ66 201 aa7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 PPP1R9AQ9ULJ8 1098 aa7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 PPT2Q9UMR5 302 aa7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 SNCAIPQ9Y6H5 919 aa7.29□□□□□ -1.24
MTHFD1-206ENST00000554353 ARHGEF40Q8TER5 1519 aa7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 LRRIQ1Q96JM4 1722 aa7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 SIGLEC1Q9BZZ2 1709 aa7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 MYO5CQ9NQX4 1742 aa7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 MEGF11A6BM72 1044 aa7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 GFRA2O00451 464 aa7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 SOX9P48436 509 aa7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 COL9A2Q14055 689 aaPredicted RBP7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 ZC3H12AQ5D1E8 599 aaKnown RBP7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 CCDC81Q6ZN84 652 aa7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 DHX38Q92620 1227 aaKnown RBP7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 FERD3LQ96RJ6 166 aa7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 AKTIPQ9H8T0 292 aa7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 POLR3KQ9Y2Y1 108 aaPredicted RBP7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 PCDHB14Q9Y5E9 798 aa7.28□□□□□ -1.24
MTHFD1-206ENST00000554353 C9orf172C9J069 976 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 TMPRSS2O15393 492 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 FGRP09769 529 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 ADH5P11766 374 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 GLB1P16278 677 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 CLCQ05315 142 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 PPM1JQ5JR12 505 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 DYMQ7RTS9 669 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 SMG8Q8ND04 991 aaKnown RBP7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 LENG1Q96BZ8 264 aaPredicted RBP7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 NACC1Q96RE7 527 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 HIF3AQ9Y2N7 669 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 PCDHGC5Q9Y5F6 944 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 CORINQ9Y5Q5 1042 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 MRVI1Q9Y6F6 885 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 HECW1Q76N89 1606 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 ZMYM4Q5VZL5 1548 aa7.27□□□□□ -1.25
MTHFD1-206ENST00000554353 FER1L4A9Z1Z3 1794 aa7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 ETF1P62495 437 aaKnown RBP7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 SOX4Q06945 474 aaPredicted RBP7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 CYFIP1Q7L576 1253 aa7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 TMEM130Q8N3G9 435 aa7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 Q8N3U1 123 aa7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 SRRTQ9BXP5 876 aaKnown RBP7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 SUGCTQ9HAC7 445 aa7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 CRIM1Q9NZV1 1036 aa7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 KIF14Q15058 1648 aa7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 ZFYVE16Q7Z3T8 1539 aa7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 PLCH2O75038 1416 aa7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 FMN1Q68DA7 1419 aa7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 YEATS2Q9ULM3 1422 aa7.26□□□□□ -1.25
MTHFD1-206ENST00000554353 PCF11O94913 1555 aaKnown RBP7.25□□□□□ -1.25
MTHFD1-206ENST00000554353 BTBD11A6QL63 1104 aa7.25□□□□□ -1.25
MTHFD1-206ENST00000554353 SART1O43290 800 aaKnown RBP7.25□□□□□ -1.25
MTHFD1-206ENST00000554353 STK10O94804 968 aaKnown RBP7.25□□□□□ -1.25
MTHFD1-206ENST00000554353 ITGB2P05107 769 aa7.25□□□□□ -1.25
MTHFD1-206ENST00000554353 GRK4P32298 578 aa7.25□□□□□ -1.25
MTHFD1-206ENST00000554353 IREB2P48200 963 aaKnown RBP7.25□□□□□ -1.25
MTHFD1-206ENST00000554353 ERVK-24P63145 666 aa7.25□□□□□ -1.25
MTHFD1-206ENST00000554353 NRG1Q02297 640 aaPredicted RBP7.25□□□□□ -1.25
MTHFD1-206ENST00000554353 MLECQ14165 292 aa7.25□□□□□ -1.25
MTHFD1-206ENST00000554353 ANKRD34AQ69YU3 496 aa7.25□□□□□ -1.25
MTHFD1-206ENST00000554353 REXO1Q8N1G1 1221 aaKnown RBP7.25□□□□□ -1.25
MTHFD1-206ENST00000554353 UBXN4Q92575 508 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms