RNA–Protein interactions for RNA: ENST00000554338.1

RIPK3-202, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 5

Gene RIPK3, Length 500 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-202ENST00000554338 MYH1P12882 1939 aa16.7■□□□□ 0.26
RIPK3-202ENST00000554338 INHAP05111 366 aa16.69■□□□□ 0.26
RIPK3-202ENST00000554338 MS4A1P11836 297 aa16.69■□□□□ 0.26
RIPK3-202ENST00000554338 GJA8P48165 433 aa16.69■□□□□ 0.26
RIPK3-202ENST00000554338 GCLCP48506 637 aaPredicted RBP16.69■□□□□ 0.26
RIPK3-202ENST00000554338 MAP3K12Q12852 859 aa16.69■□□□□ 0.26
RIPK3-202ENST00000554338 IRF5Q13568 498 aa16.69■□□□□ 0.26
RIPK3-202ENST00000554338 HSP90AB4PQ58FF6 505 aa16.69■□□□□ 0.26
RIPK3-202ENST00000554338 UBE2Q1Q7Z7E8 422 aa16.69■□□□□ 0.26
RIPK3-202ENST00000554338 ZBTB40Q9NUA8 1239 aa16.69■□□□□ 0.26
RIPK3-202ENST00000554338 APBB1O00213 710 aa16.68■□□□□ 0.26
RIPK3-202ENST00000554338 USP5P45974 858 aa16.68■□□□□ 0.26
RIPK3-202ENST00000554338 CERS3Q8IU89 383 aa16.68■□□□□ 0.26
RIPK3-202ENST00000554338 PXYLP1Q8TE99 480 aa16.68■□□□□ 0.26
RIPK3-202ENST00000554338 COA7Q96BR5 231 aa16.68■□□□□ 0.26
RIPK3-202ENST00000554338 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
RIPK3-202ENST00000554338 RIOK1Q9BRS2 568 aaKnown RBP16.68■□□□□ 0.26
RIPK3-202ENST00000554338 GINM1Q9NU53 330 aa16.68■□□□□ 0.26
RIPK3-202ENST00000554338 TAOK2Q9UL54 1235 aa16.68■□□□□ 0.26
RIPK3-202ENST00000554338 DDX19BQ9UMR2 479 aa16.68■□□□□ 0.26
RIPK3-202ENST00000554338 NAV1Q8NEY1 1877 aa16.67■□□□□ 0.26
RIPK3-202ENST00000554338 PEX10O60683 326 aa16.67■□□□□ 0.26
RIPK3-202ENST00000554338 GH2P01242 217 aa16.67■□□□□ 0.26
RIPK3-202ENST00000554338 IRX3P78415 501 aaPredicted RBP16.67■□□□□ 0.26
RIPK3-202ENST00000554338 HABP4Q5JVS0 413 aaKnown RBP16.67■□□□□ 0.26
RIPK3-202ENST00000554338 NKX2-3Q8TAU0 364 aa16.67■□□□□ 0.26
RIPK3-202ENST00000554338 U2AF1L4Q8WU68 220 aaKnown RBP16.67■□□□□ 0.26
RIPK3-202ENST00000554338 TMOD4Q9NZQ9 345 aa16.67■□□□□ 0.26
RIPK3-202ENST00000554338 MORF4L1Q9UBU8 362 aa16.67■□□□□ 0.26
RIPK3-202ENST00000554338 CEP290O15078 2479 aa16.67■□□□□ 0.26
RIPK3-202ENST00000554338 USP17L10C9JJH3 530 aa16.66■□□□□ 0.26
RIPK3-202ENST00000554338 PDE6AP16499 860 aa16.66■□□□□ 0.26
RIPK3-202ENST00000554338 HOXA7P31268 230 aaPredicted RBP16.66■□□□□ 0.26
RIPK3-202ENST00000554338 TATDN1Q6P1N9 297 aa16.66■□□□□ 0.26
RIPK3-202ENST00000554338 TMED8Q6PL24 325 aaPredicted RBP16.66■□□□□ 0.26
RIPK3-202ENST00000554338 RPAP2Q8IXW5 612 aaPredicted RBP16.66■□□□□ 0.26
RIPK3-202ENST00000554338 CLASRPQ8N2M8 674 aaKnown RBP16.66■□□□□ 0.26
RIPK3-202ENST00000554338 P2RX7Q99572 595 aaKnown RBP16.66■□□□□ 0.26
RIPK3-202ENST00000554338 EHD4Q9H223 541 aa16.66■□□□□ 0.26
RIPK3-202ENST00000554338 SERPINB13Q9UIV8 391 aa16.66■□□□□ 0.26
RIPK3-202ENST00000554338 PLXNB2O15031 1838 aa16.66■□□□□ 0.26
RIPK3-202ENST00000554338 C19orf81C9J6K1 198 aa16.65■□□□□ 0.26
RIPK3-202ENST00000554338 H0YGN5 161 aa16.65■□□□□ 0.26
RIPK3-202ENST00000554338 HMMRO75330 724 aa16.65■□□□□ 0.26
RIPK3-202ENST00000554338 HERVK_113P62684 666 aa16.65■□□□□ 0.26
RIPK3-202ENST00000554338 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.65■□□□□ 0.26
RIPK3-202ENST00000554338 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
RIPK3-202ENST00000554338 DNAJC2Q99543 621 aaKnown RBP16.65■□□□□ 0.26
RIPK3-202ENST00000554338 TXNRD2Q9NNW7 524 aa16.65■□□□□ 0.26
RIPK3-202ENST00000554338 EMILIN3Q9NT22 766 aa16.65■□□□□ 0.26
RIPK3-202ENST00000554338 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
RIPK3-202ENST00000554338 RANBP2P49792 3224 aaKnown RBP16.64■□□□□ 0.25
RIPK3-202ENST00000554338 MAGEB6P1A0A0J9YX57 407 aa16.64■□□□□ 0.25
RIPK3-202ENST00000554338 GOLIM4O00461 696 aa16.64■□□□□ 0.25
RIPK3-202ENST00000554338 FARP2O94887 1054 aaPredicted RBP16.64■□□□□ 0.25
RIPK3-202ENST00000554338 IFIT2P09913 472 aaKnown RBP16.64■□□□□ 0.25
RIPK3-202ENST00000554338 SHMT1P34896 483 aa16.64■□□□□ 0.25
RIPK3-202ENST00000554338 PLCD1P51178 756 aa16.64■□□□□ 0.25
RIPK3-202ENST00000554338 EVX2Q03828 476 aa16.64■□□□□ 0.25
RIPK3-202ENST00000554338 TTF1Q15361 905 aaPredicted RBP16.64■□□□□ 0.25
RIPK3-202ENST00000554338 BCL11AQ9H165 835 aa16.64■□□□□ 0.25
RIPK3-202ENST00000554338 PAK6Q9NQU5 681 aaPredicted RBP16.64■□□□□ 0.25
RIPK3-202ENST00000554338 GJD2Q9UKL4 321 aa16.64■□□□□ 0.25
RIPK3-202ENST00000554338 ZNF532Q9HCE3 1301 aa16.64■□□□□ 0.25
RIPK3-202ENST00000554338 TCRBV5S4A2TA0A5A2 114 aa16.63■□□□□ 0.25
RIPK3-202ENST00000554338 SGPL1O95470 568 aa16.63■□□□□ 0.25
RIPK3-202ENST00000554338 SLC9C2Q5TAH2 1124 aa16.63■□□□□ 0.25
RIPK3-202ENST00000554338 C20orf194Q5TEA3 1177 aa16.63■□□□□ 0.25
RIPK3-202ENST00000554338 USP17L2Q6R6M4 530 aa16.63■□□□□ 0.25
RIPK3-202ENST00000554338 POTEEQ6S8J3 1075 aa16.63■□□□□ 0.25
RIPK3-202ENST00000554338 TTC6Q86TZ1 520 aa16.63■□□□□ 0.25
RIPK3-202ENST00000554338 DEFB118Q96PH6 123 aa16.63■□□□□ 0.25
RIPK3-202ENST00000554338 RAB11FIP3O75154 756 aa16.62■□□□□ 0.25
RIPK3-202ENST00000554338 HMGCRP04035 888 aa16.62■□□□□ 0.25
RIPK3-202ENST00000554338 GABPAQ06546 454 aa16.62■□□□□ 0.25
RIPK3-202ENST00000554338 TRIM32Q13049 653 aa16.62■□□□□ 0.25
RIPK3-202ENST00000554338 RAB3GAP1Q15042 981 aa16.62■□□□□ 0.25
RIPK3-202ENST00000554338 ZYXQ15942 572 aaKnown RBP16.62■□□□□ 0.25
RIPK3-202ENST00000554338 CERKLQ49MI3 558 aaPredicted RBP16.62■□□□□ 0.25
RIPK3-202ENST00000554338 LCORLQ8N3X6 602 aa16.62■□□□□ 0.25
RIPK3-202ENST00000554338 ACER1Q8TDN7 264 aa16.62■□□□□ 0.25
RIPK3-202ENST00000554338 C12orf42Q96LP6 360 aa16.62■□□□□ 0.25
RIPK3-202ENST00000554338 FEZ1Q99689 392 aa16.62■□□□□ 0.25
RIPK3-202ENST00000554338 CRNKL1Q9BZJ0 848 aaKnown RBP16.62■□□□□ 0.25
RIPK3-202ENST00000554338 RBPJLQ9UBG7 517 aa16.62■□□□□ 0.25
RIPK3-202ENST00000554338 COLQQ9Y215 455 aaPredicted RBP16.62■□□□□ 0.25
RIPK3-202ENST00000554338 GUCY1A2P33402 732 aa16.61■□□□□ 0.25
RIPK3-202ENST00000554338 ERVK-9P63128 1117 aa16.61■□□□□ 0.25
RIPK3-202ENST00000554338 ERVK-24P63145 666 aa16.61■□□□□ 0.25
RIPK3-202ENST00000554338 ABCB5Q2M3G0 1257 aa16.61■□□□□ 0.25
RIPK3-202ENST00000554338 SLFNL1Q499Z3 407 aa16.61■□□□□ 0.25
RIPK3-202ENST00000554338 GPRC5AQ8NFJ5 357 aa16.61■□□□□ 0.25
RIPK3-202ENST00000554338 SDR42E1Q8WUS8 393 aa16.61■□□□□ 0.25
RIPK3-202ENST00000554338 DPF3Q92784 378 aa16.61■□□□□ 0.25
RIPK3-202ENST00000554338 PAGR1Q9BTK6 254 aa16.61■□□□□ 0.25
RIPK3-202ENST00000554338 CRISPLD2Q9H0B8 497 aa16.61■□□□□ 0.25
RIPK3-202ENST00000554338 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.61■□□□□ 0.25
RIPK3-202ENST00000554338 PORCNQ9H237 461 aa16.61■□□□□ 0.25
RIPK3-202ENST00000554338 POLR3DP05423 398 aaPredicted RBP16.6■□□□□ 0.25
RIPK3-202ENST00000554338 CYP2D6P10635 497 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms