RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 RBM5P52756 815 aaKnown RBP eCLIP21.77■■□□□ 1.08
LRP1-204ENST00000553277 SCRN1Q12765 414 aa21.77■■□□□ 1.08
LRP1-204ENST00000553277 TRDNQ13061 729 aa21.77■■□□□ 1.08
LRP1-204ENST00000553277 RESTQ13127 1097 aa21.77■■□□□ 1.08
LRP1-204ENST00000553277 DLGAP5Q15398 846 aa21.77■■□□□ 1.08
LRP1-204ENST00000553277 MTA3Q9BTC8 594 aa21.77■■□□□ 1.08
LRP1-204ENST00000553277 KRT23Q9C075 422 aa21.77■■□□□ 1.08
LRP1-204ENST00000553277 CYP2D7A0A087X1C5 515 aa21.76■■□□□ 1.07
LRP1-204ENST00000553277 GMPSP49915 693 aaPredicted RBP21.76■■□□□ 1.07
LRP1-204ENST00000553277 FGD1P98174 961 aa21.76■■□□□ 1.07
LRP1-204ENST00000553277 STK3Q13188 491 aa21.76■■□□□ 1.07
LRP1-204ENST00000553277 RNF214Q8ND24 703 aa21.76■■□□□ 1.07
LRP1-204ENST00000553277 NEDD4P46934 1319 aa21.76■■□□□ 1.07
LRP1-204ENST00000553277 COL2A1P02458 1487 aaPredicted RBP21.76■■□□□ 1.07
LRP1-204ENST00000553277 SMIM22K7EJ46 135 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 NFIAQ12857 509 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 RALYLQ86SE5 291 aaKnown RBP21.75■■□□□ 1.07
LRP1-204ENST00000553277 AMOTL1Q8IY63 956 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 OSBPL5Q9H0X9 879 aaPredicted RBP21.75■■□□□ 1.07
LRP1-204ENST00000553277 FAM198AQ9UFP1 575 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 CFAP45Q9UL16 551 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 ZKSCAN5Q9Y2L8 839 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 ZC3H4Q9UPT8 1303 aaKnown RBP21.75■■□□□ 1.07
LRP1-204ENST00000553277 ENTPD3O75355 529 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 SLC3A2P08195 630 aaKnown RBP21.75■■□□□ 1.07
LRP1-204ENST00000553277 CYP2D6P10635 497 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 ANTXR2P58335 489 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 GPR162Q16538 588 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 SPDYE2Q495Y8 402 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 NSUN7Q8NE18 718 aaKnown RBP21.75■■□□□ 1.07
LRP1-204ENST00000553277 LEO1Q8WVC0 666 aaPredicted RBP21.75■■□□□ 1.07
LRP1-204ENST00000553277 SPATA32Q96LK8 384 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 TDRD3Q9H7E2 651 aaKnown RBP21.75■■□□□ 1.07
LRP1-204ENST00000553277 MYOZ2Q9NPC6 264 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 DDX19AQ9NUU7 478 aaKnown RBP21.75■■□□□ 1.07
LRP1-204ENST00000553277 RNF181Q9P0P0 153 aa21.75■■□□□ 1.07
LRP1-204ENST00000553277 PLCD1P51178 756 aa21.74■■□□□ 1.07
LRP1-204ENST00000553277 ATRNL1Q5VV63 1379 aa21.74■■□□□ 1.07
LRP1-204ENST00000553277 C9orf131Q5VYM1 1079 aa21.74■■□□□ 1.07
LRP1-204ENST00000553277 NKX2-3Q8TAU0 364 aa21.74■■□□□ 1.07
LRP1-204ENST00000553277 INCENPQ9NQS7 918 aa21.74■■□□□ 1.07
LRP1-204ENST00000553277 CNOT7Q9UIV1 285 aaKnown RBP21.74■■□□□ 1.07
LRP1-204ENST00000553277 H3BQV1 296 aa21.73■■□□□ 1.07
LRP1-204ENST00000553277 WNT10BO00744 389 aa21.73■■□□□ 1.07
LRP1-204ENST00000553277 JAK2O60674 1132 aa21.73■■□□□ 1.07
LRP1-204ENST00000553277 CCDC192P0DO97 292 aa21.73■■□□□ 1.07
LRP1-204ENST00000553277 EVX2Q03828 476 aa21.73■■□□□ 1.07
LRP1-204ENST00000553277 GABPAQ06546 454 aa21.73■■□□□ 1.07
LRP1-204ENST00000553277 IFFO2Q5TF58 517 aa21.73■■□□□ 1.07
LRP1-204ENST00000553277 RBM43Q6ZSC3 357 aaKnown RBP21.73■■□□□ 1.07
LRP1-204ENST00000553277 DHX36Q9H2U1 1008 aaKnown RBP21.73■■□□□ 1.07
LRP1-204ENST00000553277 ZSWIM5Q9P217 1185 aa21.73■■□□□ 1.07
LRP1-204ENST00000553277 B4E1Z4 1266 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 POLR3DP05423 398 aaPredicted RBP21.72■■□□□ 1.07
LRP1-204ENST00000553277 PDE4BQ07343 736 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 C16orf86Q6ZW13 317 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 FERMT3Q86UX7 667 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 MICALL2Q8IY33 904 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 ZNF70Q9UC06 446 aaPredicted RBP21.72■■□□□ 1.07
LRP1-204ENST00000553277 GJA3Q9Y6H8 435 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 OFD1O75665 1012 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 CYB5R4Q7L1T6 521 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 METTL16Q86W50 562 aaKnown RBP21.72■■□□□ 1.07
LRP1-204ENST00000553277 ESR2Q92731 530 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 TMEM87BQ96K49 555 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 NUP62CLQ9H1M0 184 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 EHD4Q9H223 541 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 GPRC5DQ9NZD1 345 aa21.72■■□□□ 1.07
LRP1-204ENST00000553277 SAP30BPQ9UHR5 308 aaKnown RBP21.72■■□□□ 1.07
LRP1-204ENST00000553277 SHTN1A0MZ66 631 aa21.71■■□□□ 1.07
LRP1-204ENST00000553277 GOLGA6L4A6NEF3 574 aa21.71■■□□□ 1.07
LRP1-204ENST00000553277 PRC1O43663 620 aa21.71■■□□□ 1.07
LRP1-204ENST00000553277 PDIA3P30101 505 aaKnown RBP21.71■■□□□ 1.07
LRP1-204ENST00000553277 TERF1P54274 439 aa21.71■■□□□ 1.07
LRP1-204ENST00000553277 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.71■■□□□ 1.07
LRP1-204ENST00000553277 KDM4AO75164 1064 aa21.7■■□□□ 1.06
LRP1-204ENST00000553277 CTDNEP1O95476 244 aa21.7■■□□□ 1.06
LRP1-204ENST00000553277 PICALMQ13492 652 aa21.7■■□□□ 1.06
LRP1-204ENST00000553277 MAP3K11Q16584 847 aa21.7■■□□□ 1.06
LRP1-204ENST00000553277 FAM83AQ86UY5 434 aa21.7■■□□□ 1.06
LRP1-204ENST00000553277 ZFPM1Q8IX07 1006 aa21.7■■□□□ 1.06
LRP1-204ENST00000553277 IGDCC4Q8TDY8 1250 aa21.7■■□□□ 1.06
LRP1-204ENST00000553277 ZNF287Q9HBT7 754 aa21.7■■□□□ 1.06
LRP1-204ENST00000553277 PTPDC1A2A3K4 754 aa21.69■■□□□ 1.06
LRP1-204ENST00000553277 DHX16O60231 1041 aaKnown RBP21.69■■□□□ 1.06
LRP1-204ENST00000553277 APOBRQ0VD83 1088 aa21.69■■□□□ 1.06
LRP1-204ENST00000553277 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.69■■□□□ 1.06
LRP1-204ENST00000553277 TMOD2Q9NZR1 351 aa21.69■■□□□ 1.06
LRP1-204ENST00000553277 H7C1D1 291 aa21.69■■□□□ 1.06
LRP1-204ENST00000553277 MYO1BO43795 1136 aa21.69■■□□□ 1.06
LRP1-204ENST00000553277 LIFRP42702 1097 aa21.69■■□□□ 1.06
LRP1-204ENST00000553277 CACNB3P54284 484 aa21.69■■□□□ 1.06
LRP1-204ENST00000553277 NBPF9Q3BBW0 867 aa21.69■■□□□ 1.06
LRP1-204ENST00000553277 SH3BP5LQ7L8J4 393 aa21.69■■□□□ 1.06
LRP1-204ENST00000553277 RCOR1Q9UKL0 485 aa21.69■■□□□ 1.06
LRP1-204ENST00000553277 CAVIN2O95810 425 aa21.68■■□□□ 1.06
LRP1-204ENST00000553277 EGFRP00533 1210 aa21.68■■□□□ 1.06
LRP1-204ENST00000553277 FAM151AQ8WW52 585 aa21.68■■□□□ 1.06
LRP1-204ENST00000553277 DYNLL2Q96FJ2 89 aa21.68■■□□□ 1.06
LRP1-204ENST00000553277 L3MBTL3Q96JM7 780 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms