RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ZBTB21Q9ULJ3 1066 aa23.27■■□□□ 1.32
PTCH1-227ENST00000553256 LOC285556D6RIA3 1793 aa23.27■■□□□ 1.32
PTCH1-227ENST00000553256 ERC2O15083 957 aa23.26■■□□□ 1.31
PTCH1-227ENST00000553256 GDF11O95390 407 aa23.26■■□□□ 1.31
PTCH1-227ENST00000553256 ASNSP08243 561 aa23.26■■□□□ 1.31
PTCH1-227ENST00000553256 GUCY1A2P33402 732 aa23.26■■□□□ 1.31
PTCH1-227ENST00000553256 FASTKD5Q7L8L6 764 aaKnown RBP23.26■■□□□ 1.31
PTCH1-227ENST00000553256 APPBP2Q92624 585 aa23.26■■□□□ 1.31
PTCH1-227ENST00000553256 MCM9Q9NXL9 1143 aa23.26■■□□□ 1.31
PTCH1-227ENST00000553256 BCRP11274 1271 aa23.25■■□□□ 1.31
PTCH1-227ENST00000553256 NUCB1Q02818 461 aa23.25■■□□□ 1.31
PTCH1-227ENST00000553256 PKN2Q16513 984 aaKnown RBP23.25■■□□□ 1.31
PTCH1-227ENST00000553256 OTOP1Q7RTM1 612 aa23.25■■□□□ 1.31
PTCH1-227ENST00000553256 CRACR2BQ8N4Y2 399 aaPredicted RBP23.25■■□□□ 1.31
PTCH1-227ENST00000553256 PROCA1Q8NCQ7 364 aaPredicted RBP23.25■■□□□ 1.31
PTCH1-227ENST00000553256 CD99L2Q8TCZ2 262 aa23.25■■□□□ 1.31
PTCH1-227ENST00000553256 CENPFP49454 3210 aa23.25■■□□□ 1.31
PTCH1-227ENST00000553256 ZFYP08048 801 aaPredicted RBP23.24■■□□□ 1.31
PTCH1-227ENST00000553256 CTGFP29279 349 aa23.24■■□□□ 1.31
PTCH1-227ENST00000553256 TREML2Q5T2D2 321 aa23.24■■□□□ 1.31
PTCH1-227ENST00000553256 C12orf60Q5U649 245 aa23.24■■□□□ 1.31
PTCH1-227ENST00000553256 TAOK2Q9UL54 1235 aa23.24■■□□□ 1.31
PTCH1-227ENST00000553256 AGTPBP1Q9UPW5 1226 aa23.24■■□□□ 1.31
PTCH1-227ENST00000553256 GSG1L2A8MUP6 293 aa23.23■■□□□ 1.31
PTCH1-227ENST00000553256 M0R2C6 588 aa23.23■■□□□ 1.31
PTCH1-227ENST00000553256 CYP2C8P10632 490 aa23.23■■□□□ 1.31
PTCH1-227ENST00000553256 BACE1P56817 501 aa23.23■■□□□ 1.31
PTCH1-227ENST00000553256 ERO1AQ96HE7 468 aa23.23■■□□□ 1.31
PTCH1-227ENST00000553256 LNPKQ9C0E8 428 aa23.23■■□□□ 1.31
PTCH1-227ENST00000553256 CYP2D7A0A087X1C5 515 aa23.22■■□□□ 1.31
PTCH1-227ENST00000553256 GH2P01242 217 aa23.22■■□□□ 1.31
PTCH1-227ENST00000553256 POLR3DP05423 398 aaPredicted RBP23.22■■□□□ 1.31
PTCH1-227ENST00000553256 ZMYM1Q5SVZ6 1142 aa23.22■■□□□ 1.31
PTCH1-227ENST00000553256 CHD1LQ86WJ1 897 aa23.22■■□□□ 1.31
PTCH1-227ENST00000553256 SLC44A5Q8NCS7 719 aa23.22■■□□□ 1.31
PTCH1-227ENST00000553256 OSBPL3Q9H4L5 887 aa23.22■■□□□ 1.31
PTCH1-227ENST00000553256 EPB41L4AQ9HCS5 686 aaPredicted RBP23.22■■□□□ 1.31
PTCH1-227ENST00000553256 FOXP2O15409 715 aa23.21■■□□□ 1.31
PTCH1-227ENST00000553256 HMGCS2P54868 508 aa23.21■■□□□ 1.31
PTCH1-227ENST00000553256 LACTBP83111 547 aaPredicted RBP23.21■■□□□ 1.31
PTCH1-227ENST00000553256 CTR9Q6PD62 1173 aa23.21■■□□□ 1.31
PTCH1-227ENST00000553256 FBXO46Q6PJ61 603 aaPredicted RBP23.21■■□□□ 1.31
PTCH1-227ENST00000553256 DYNLL2Q96FJ2 89 aa23.21■■□□□ 1.31
PTCH1-227ENST00000553256 SEC62Q99442 399 aaKnown RBP23.21■■□□□ 1.31
PTCH1-227ENST00000553256 ARHGAP39Q9C0H5 1083 aa23.21■■□□□ 1.31
PTCH1-227ENST00000553256 CPA4Q9UI42 421 aa23.21■■□□□ 1.31
PTCH1-227ENST00000553256 HPS5Q9UPZ3 1129 aa23.21■■□□□ 1.31
PTCH1-227ENST00000553256 SLC4A4Q9Y6R1 1079 aa23.21■■□□□ 1.31
PTCH1-227ENST00000553256 BAZ2AQ9UIF9 1905 aaKnown RBP23.21■■□□□ 1.31
PTCH1-227ENST00000553256 ZSWIM8A7E2V4 1837 aa23.2■■□□□ 1.3
PTCH1-227ENST00000553256 USP17L12C9JPN9 530 aa23.2■■□□□ 1.3
PTCH1-227ENST00000553256 USP17L21D6R901 530 aa23.2■■□□□ 1.3
PTCH1-227ENST00000553256 GPAA1O43292 621 aa23.2■■□□□ 1.3
PTCH1-227ENST00000553256 CERKLQ49MI3 558 aaPredicted RBP23.2■■□□□ 1.3
PTCH1-227ENST00000553256 GIMAP6Q6P9H5 292 aa23.2■■□□□ 1.3
PTCH1-227ENST00000553256 GADL1Q6ZQY3 521 aa23.2■■□□□ 1.3
PTCH1-227ENST00000553256 PLEKHM2Q8IWE5 1019 aa23.2■■□□□ 1.3
PTCH1-227ENST00000553256 PARK7Q99497 189 aaKnown RBP23.2■■□□□ 1.3
PTCH1-227ENST00000553256 AS3MTQ9HBK9 375 aa23.2■■□□□ 1.3
PTCH1-227ENST00000553256 CAPN15O75808 1086 aa23.19■■□□□ 1.3
PTCH1-227ENST00000553256 IRX6P78412 446 aaPredicted RBP23.19■■□□□ 1.3
PTCH1-227ENST00000553256 MTMR2Q13614 643 aa23.19■■□□□ 1.3
PTCH1-227ENST00000553256 SBK1Q52WX2 424 aa23.19■■□□□ 1.3
PTCH1-227ENST00000553256 SIAH1Q8IUQ4 282 aa23.19■■□□□ 1.3
PTCH1-227ENST00000553256 TRIM34Q9BYJ4 488 aa23.19■■□□□ 1.3
PTCH1-227ENST00000553256 EMILIN3Q9NT22 766 aa23.19■■□□□ 1.3
PTCH1-227ENST00000553256 PTPN22Q9Y2R2 807 aa23.19■■□□□ 1.3
PTCH1-227ENST00000553256 TRIM17Q9Y577 477 aa23.19■■□□□ 1.3
PTCH1-227ENST00000553256 BRCA2P51587 3418 aa23.19■■□□□ 1.3
PTCH1-227ENST00000553256 HOXA7P31268 230 aaPredicted RBP23.18■■□□□ 1.3
PTCH1-227ENST00000553256 ABCB5Q2M3G0 1257 aa23.18■■□□□ 1.3
PTCH1-227ENST00000553256 B4GALNT3Q6L9W6 998 aa23.18■■□□□ 1.3
PTCH1-227ENST00000553256 POTEEQ6S8J3 1075 aa23.18■■□□□ 1.3
PTCH1-227ENST00000553256 C16orf86Q6ZW13 317 aa23.18■■□□□ 1.3
PTCH1-227ENST00000553256 C12orf42Q96LP6 360 aa23.18■■□□□ 1.3
PTCH1-227ENST00000553256 SWAP70Q9UH65 585 aa23.18■■□□□ 1.3
PTCH1-227ENST00000553256 ROBO3Q96MS0 1386 aa23.17■■□□□ 1.3
PTCH1-227ENST00000553256 C19orf81C9J6K1 198 aa23.17■■□□□ 1.3
PTCH1-227ENST00000553256 TICAM2Q86XR7 235 aa23.17■■□□□ 1.3
PTCH1-227ENST00000553256 ACER1Q8TDN7 264 aa23.17■■□□□ 1.3
PTCH1-227ENST00000553256 EVI5LQ96CN4 794 aa23.17■■□□□ 1.3
PTCH1-227ENST00000553256 EFCC1Q9HA90 598 aa23.17■■□□□ 1.3
PTCH1-227ENST00000553256 USP17L10C9JJH3 530 aa23.16■■□□□ 1.3
PTCH1-227ENST00000553256 CDK8P49336 464 aa23.16■■□□□ 1.3
PTCH1-227ENST00000553256 FSD1Q9BTV5 496 aa23.16■■□□□ 1.3
PTCH1-227ENST00000553256 A0A1W2PRG0 241 aa23.15■■□□□ 1.3
PTCH1-227ENST00000553256 RGS19P49795 217 aa23.15■■□□□ 1.3
PTCH1-227ENST00000553256 SEPT2Q15019 361 aa23.15■■□□□ 1.3
PTCH1-227ENST00000553256 TRIM47Q96LD4 638 aa23.15■■□□□ 1.3
PTCH1-227ENST00000553256 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.15■■□□□ 1.3
PTCH1-227ENST00000553256 KIAA1683Q9H0B3 1180 aa23.15■■□□□ 1.3
PTCH1-227ENST00000553256 ASCC2Q9H1I8 757 aaPredicted RBP23.15■■□□□ 1.3
PTCH1-227ENST00000553256 ARPP21Q9UBL0 812 aaPredicted RBP23.15■■□□□ 1.3
PTCH1-227ENST00000553256 PATL2C9JE40 543 aaKnown RBP23.14■■□□□ 1.29
PTCH1-227ENST00000553256 AKR1B1P15121 316 aa23.14■■□□□ 1.29
PTCH1-227ENST00000553256 PDE4AP27815 886 aa23.14■■□□□ 1.29
PTCH1-227ENST00000553256 LRRFIP1Q32MZ4 808 aaKnown RBP23.14■■□□□ 1.29
PTCH1-227ENST00000553256 CCDC85CA6NKD9 419 aa23.13■■□□□ 1.29
PTCH1-227ENST00000553256 GNAT2P19087 354 aa23.13■■□□□ 1.29
PTCH1-227ENST00000553256 ZBTB47Q9UFB7 747 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms