RNA–Protein interactions for RNA: ENST00000552599.5

CNOT2-240, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-240ENST00000552599 PPP4R4Q6NUP7 873 aa8.67□□□□□ -1.02
CNOT2-240ENST00000552599 LDHAL6AQ6ZMR3 332 aa8.67□□□□□ -1.02
CNOT2-240ENST00000552599 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
CNOT2-240ENST00000552599 MAFBQ9Y5Q3 323 aaPredicted RBP8.67□□□□□ -1.02
CNOT2-240ENST00000552599 GJA3Q9Y6H8 435 aa8.67□□□□□ -1.02
CNOT2-240ENST00000552599 CNTNAP4Q9C0A0 1308 aa8.67□□□□□ -1.02
CNOT2-240ENST00000552599 VGLL3A8MV65 326 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 HIP1O00291 1037 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 VIL1P09327 827 aaKnown RBP8.66□□□□□ -1.02
CNOT2-240ENST00000552599 FLT3P36888 993 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 PSMD2Q13200 908 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 METTL24Q5JXM2 366 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 PRPF40BQ6NWY9 871 aaKnown RBP8.66□□□□□ -1.02
CNOT2-240ENST00000552599 TMEM87AQ8NBN3 555 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 XAGE2Q96GT9 111 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 SEC62Q99442 399 aaKnown RBP8.66□□□□□ -1.02
CNOT2-240ENST00000552599 CCNL1Q9UK58 526 aaPredicted RBP8.66□□□□□ -1.02
CNOT2-240ENST00000552599 TRPC5Q9UL62 973 aaPredicted RBP8.66□□□□□ -1.02
CNOT2-240ENST00000552599 LRP5O75197 1615 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 CLK2P49760 499 aaKnown RBP8.66□□□□□ -1.02
CNOT2-240ENST00000552599 MAP2K1Q02750 393 aaPredicted RBP8.66□□□□□ -1.02
CNOT2-240ENST00000552599 LRRC41Q15345 812 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 PARP10Q53GL7 1025 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 CCDC129Q6ZRS4 1044 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 TTC13Q8NBP0 860 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 SNRNP27Q8WVK2 155 aaKnown RBP8.66□□□□□ -1.02
CNOT2-240ENST00000552599 AGBL1Q96MI9 1066 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 PTPRHQ9HD43 1115 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 SEC31BQ9NQW1 1179 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 CNNM1Q9NRU3 951 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 PAG1Q9NWQ8 432 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 SRP68Q9UHB9 627 aaKnown RBP8.66□□□□□ -1.02
CNOT2-240ENST00000552599 COL4A1P02462 1669 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 SCN7AQ01118 1682 aa8.66□□□□□ -1.02
CNOT2-240ENST00000552599 BPNT1O95861 308 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 IFIT1P09914 478 aaKnown RBP8.65□□□□□ -1.02
CNOT2-240ENST00000552599 NAT2P11245 290 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 CPA1P15085 419 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 SCARF1Q14162 830 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 ATP2B3Q16720 1220 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 BICDL1Q6ZP65 573 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 ZGPATQ8N5A5 531 aaKnown RBP8.65□□□□□ -1.02
CNOT2-240ENST00000552599 VGLL2Q8N8G2 317 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 KBTBD3Q8NAB2 608 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 BCL2L12Q9HB09 334 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 RBM8AQ9Y5S9 174 aaKnown RBP8.65□□□□□ -1.02
CNOT2-240ENST00000552599 TAF1LQ8IZX4 1826 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 SPEF2Q9C093 1822 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 LY75O60449 1722 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 LAMB2P55268 1798 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 COL9A3Q14050 684 aaPredicted RBP8.65□□□□□ -1.02
CNOT2-240ENST00000552599 ADCK5Q3MIX3 580 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 PI16Q6UXB8 463 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 CHPFQ8IZ52 775 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 TMX3Q96JJ7 454 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 AKAP2Q9Y2D5 859 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 ZNF652Q9Y2D9 606 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 TAF6LQ9Y6J9 622 aa8.65□□□□□ -1.02
CNOT2-240ENST00000552599 RFX7Q2KHR2 1363 aa8.65□□□□□ -1.03
CNOT2-240ENST00000552599 SNAP23O00161 211 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 TBX3O15119 743 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 NECTIN1Q15223 517 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 ARSIQ5FYB1 569 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 TTC39AQ5SRH9 613 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 USPL1Q5W0Q7 1092 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 LARP1BQ659C4 914 aaKnown RBP8.64□□□□□ -1.03
CNOT2-240ENST00000552599 TBC1D9BQ66K14 1250 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.64□□□□□ -1.03
CNOT2-240ENST00000552599 MAP4K1Q92918 833 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 CENPOQ9BU64 300 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 RNF19AQ9NV58 838 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 FAM198AQ9UFP1 575 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 TAF5LO75529 589 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 RPS6KA4O75676 772 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 NAT1P18440 290 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 CASTP20810 708 aaKnown RBP8.64□□□□□ -1.03
CNOT2-240ENST00000552599 KCNJ4P48050 445 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 FKBP4Q02790 459 aaKnown RBP eCLIP8.64□□□□□ -1.03
CNOT2-240ENST00000552599 RAB3GAP1Q15042 981 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 ERFEQ4G0M1 354 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 CREB3L3Q68CJ9 461 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 LIMD1Q9UGP4 676 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 MRVI1Q9Y6F6 885 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 TAF1P21675 1872 aa8.64□□□□□ -1.03
CNOT2-240ENST00000552599 AKAP11Q9UKA4 1901 aa8.63□□□□□ -1.03
CNOT2-240ENST00000552599 SLC27A2O14975 620 aa8.63□□□□□ -1.03
CNOT2-240ENST00000552599 PDE8BO95263 885 aa8.63□□□□□ -1.03
CNOT2-240ENST00000552599 RBP3P10745 1247 aa8.63□□□□□ -1.03
CNOT2-240ENST00000552599 ZBED6P86452 979 aa8.63□□□□□ -1.03
CNOT2-240ENST00000552599 PKP1Q13835 747 aa8.63□□□□□ -1.03
CNOT2-240ENST00000552599 SLC4A8Q2Y0W8 1093 aa8.63□□□□□ -1.03
CNOT2-240ENST00000552599 CCDC158Q5M9N0 1113 aa8.63□□□□□ -1.03
CNOT2-240ENST00000552599 RC3H1Q5TC82 1133 aaKnown RBP8.63□□□□□ -1.03
CNOT2-240ENST00000552599 CCDC70Q6NSX1 233 aa8.63□□□□□ -1.03
CNOT2-240ENST00000552599 CHCHD4Q8N4Q1 142 aa8.63□□□□□ -1.03
CNOT2-240ENST00000552599 VPS37AQ8NEZ2 397 aa8.63□□□□□ -1.03
CNOT2-240ENST00000552599 TNPO1Q92973 898 aaKnown RBP8.63□□□□□ -1.03
CNOT2-240ENST00000552599 CCDC47Q96A33 483 aaKnown RBP8.63□□□□□ -1.03
CNOT2-240ENST00000552599 JAKMIP1Q96N16 626 aaKnown RBP8.63□□□□□ -1.03
CNOT2-240ENST00000552599 TTC14Q96N46 770 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms