RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 CALML3P27482 149 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 MARCKSP29966 332 aaPredicted RBP10.27□□□□□ -0.77
TMEM116-209ENST00000550020 TRAPPC10P48553 1259 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 SLC27A3Q5K4L6 730 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 KRBA2Q6ZNG9 492 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 ADGRA1Q86SQ6 560 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 DHX40Q8IX18 779 aaKnown RBP10.27□□□□□ -0.77
TMEM116-209ENST00000550020 AOPEPQ8N6M6 819 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 ENAHQ8N8S7 591 aaPredicted RBP10.27□□□□□ -0.77
TMEM116-209ENST00000550020 CCDC150Q8NCX0 1101 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 CNNM3Q8NE01 707 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 RBM17Q96I25 401 aaKnown RBP10.27□□□□□ -0.77
TMEM116-209ENST00000550020 GJD4Q96KN9 370 aaPredicted RBP10.27□□□□□ -0.77
TMEM116-209ENST00000550020 AIFM3Q96NN9 605 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 ZKSCAN3Q9BRR0 538 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 SENP2Q9HC62 589 aa10.27□□□□□ -0.77
TMEM116-209ENST00000550020 SRP68Q9UHB9 627 aaKnown RBP10.27□□□□□ -0.77
TMEM116-209ENST00000550020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.27□□□□□ -0.77
TMEM116-209ENST00000550020 MAST2Q6P0Q8 1798 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 COL1A1P02452 1464 aaPredicted RBP10.26□□□□□ -0.77
TMEM116-209ENST00000550020 TSPY2A6NKD2 308 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 BTBD18B2RXH4 712 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 KIF2AO00139 706 aaPredicted RBP10.26□□□□□ -0.77
TMEM116-209ENST00000550020 CCP110O43303 1012 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 RRP9O43818 475 aaKnown RBP10.26□□□□□ -0.77
TMEM116-209ENST00000550020 ONECUT3O60422 494 aaPredicted RBP10.26□□□□□ -0.77
TMEM116-209ENST00000550020 WDHD1O75717 1129 aaPredicted RBP10.26□□□□□ -0.77
TMEM116-209ENST00000550020 TUBB4AP04350 444 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 USP5P45974 858 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 DYNLL1P63167 89 aaKnown RBP10.26□□□□□ -0.77
TMEM116-209ENST00000550020 MYL5Q02045 173 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 SHC4Q6S5L8 630 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 DGKHQ86XP1 1220 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 MLKLQ8NB16 471 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 CERKQ8TCT0 537 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 ZNF830Q96NB3 372 aaPredicted RBP10.26□□□□□ -0.77
TMEM116-209ENST00000550020 LZTS2Q9BRK4 669 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 KAT14Q9H8E8 782 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 DCP1AQ9NPI6 582 aaPredicted RBP10.26□□□□□ -0.77
TMEM116-209ENST00000550020 INCENPQ9NQS7 918 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 SH3GLB2Q9NR46 395 aa10.26□□□□□ -0.77
TMEM116-209ENST00000550020 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.26□□□□□ -0.77
TMEM116-209ENST00000550020 TRPC5Q9UL62 973 aaPredicted RBP10.26□□□□□ -0.77
TMEM116-209ENST00000550020 SRPRBQ9Y5M8 271 aaKnown RBP10.26□□□□□ -0.77
TMEM116-209ENST00000550020 UQCRHLA0A096LP55 91 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 BBOX1O75936 387 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 UQCRHP07919 91 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 TM4SF1P30408 202 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 PPP4CP60510 307 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 GALNT17Q6IS24 598 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 TMTC3Q6ZXV5 915 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 TBC1D22AQ8WUA7 517 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 ANKS1AQ92625 1134 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 PHF20Q9BVI0 1012 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 GJB4Q9NTQ9 266 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 TCP11L1Q9NUJ3 509 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 MCM9Q9NXL9 1143 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 AATFQ9NY61 560 aaKnown RBP eCLIP10.25□□□□□ -0.77
TMEM116-209ENST00000550020 TFCP2L1Q9NZI6 479 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 PAXBP1Q9Y5B6 917 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 TACC3Q9Y6A5 838 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 ROBO3Q96MS0 1386 aa10.25□□□□□ -0.77
TMEM116-209ENST00000550020 BTAF1O14981 1849 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 TROAPQ12815 778 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 NFIXQ14938 502 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 DPCR1Q3MIW9 517 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 FAM196AQ6ZSG2 479 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 LRRC8AQ8IWT6 810 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 ZNF444Q8N0Y2 327 aaPredicted RBP10.24□□□□□ -0.77
TMEM116-209ENST00000550020 CCDC148Q8NFR7 591 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 MYRIPQ8NFW9 859 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 SMARCE1Q969G3 411 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 OSBPL5Q9H0X9 879 aaPredicted RBP10.24□□□□□ -0.77
TMEM116-209ENST00000550020 KCNF1Q9H3M0 494 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 MKNK2Q9HBH9 465 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 FBXO2Q9UK22 296 aaPredicted RBP10.24□□□□□ -0.77
TMEM116-209ENST00000550020 KCNJ14Q9UNX9 436 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 V9GY48 417 aaPredicted RBP10.24□□□□□ -0.77
TMEM116-209ENST00000550020 A0A1B0GUL6 1792 aa10.24□□□□□ -0.77
TMEM116-209ENST00000550020 CACNA1SQ13698 1873 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 CHD4Q14839 1912 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 SCG2P13521 617 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 PRDX5P30044 214 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 TXLNAP40222 546 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 KCNJ6P48051 423 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 KCNQ4P56696 695 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 NLRP5P59047 1200 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 POSTNQ15063 836 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 C12orf60Q5U649 245 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 STK11IPQ8N1F8 1099 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 CCDC112Q8NEF3 446 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 CCDC12Q8WUD4 166 aaPredicted RBP10.23□□□□□ -0.77
TMEM116-209ENST00000550020 CRAMP1Q96RY5 1269 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 TMX4Q9H1E5 349 aaPredicted RBP10.23□□□□□ -0.77
TMEM116-209ENST00000550020 CABP5Q9NP86 173 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 KCND1Q9NSA2 647 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 GGA1Q9UJY5 639 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 MROH7-TTC4A0A0A0MT08 1334 aa10.23□□□□□ -0.77
TMEM116-209ENST00000550020 SERPINC1P01008 464 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 SKILP12757 684 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms