RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 TTF1Q15361 905 aaPredicted RBP16.34■□□□□ 0.21
GCN1-206ENST00000549815 SLC4A8Q2Y0W8 1093 aa16.34■□□□□ 0.21
GCN1-206ENST00000549815 TATDN1Q6P1N9 297 aa16.34■□□□□ 0.21
GCN1-206ENST00000549815 CRACR2BQ8N4Y2 399 aaPredicted RBP16.34■□□□□ 0.21
GCN1-206ENST00000549815 ANKRD13CQ8N6S4 541 aa16.34■□□□□ 0.21
GCN1-206ENST00000549815 EHD4Q9H223 541 aa16.34■□□□□ 0.21
GCN1-206ENST00000549815 CHMP4BQ9H444 224 aaKnown RBP16.34■□□□□ 0.21
GCN1-206ENST00000549815 TCRBV5S4A2TA0A5A2 114 aa16.33■□□□□ 0.2
GCN1-206ENST00000549815 PDE6AP16499 860 aa16.33■□□□□ 0.2
GCN1-206ENST00000549815 HOXA7P31268 230 aaPredicted RBP16.33■□□□□ 0.2
GCN1-206ENST00000549815 USP5P45974 858 aa16.33■□□□□ 0.2
GCN1-206ENST00000549815 MTMR2Q13614 643 aa16.33■□□□□ 0.2
GCN1-206ENST00000549815 SHISA4Q96DD7 197 aa16.33■□□□□ 0.2
GCN1-206ENST00000549815 ASCC2Q9H1I8 757 aaPredicted RBP16.33■□□□□ 0.2
GCN1-206ENST00000549815 NAV1Q8NEY1 1877 aa16.33■□□□□ 0.2
GCN1-206ENST00000549815 IFIT2P09913 472 aaKnown RBP16.32■□□□□ 0.2
GCN1-206ENST00000549815 GCLCP48506 637 aaPredicted RBP16.32■□□□□ 0.2
GCN1-206ENST00000549815 FLT3LGP49771 235 aa16.32■□□□□ 0.2
GCN1-206ENST00000549815 PABPC4Q13310 644 aaKnown RBP eCLIP16.32■□□□□ 0.2
GCN1-206ENST00000549815 IRF5Q13568 498 aa16.32■□□□□ 0.2
GCN1-206ENST00000549815 SLC9C2Q5TAH2 1124 aa16.32■□□□□ 0.2
GCN1-206ENST00000549815 SLAIN1Q8ND83 568 aa16.32■□□□□ 0.2
GCN1-206ENST00000549815 EDC3Q96F86 508 aaKnown RBP16.32■□□□□ 0.2
GCN1-206ENST00000549815 TRIM34Q9BYJ4 488 aa16.32■□□□□ 0.2
GCN1-206ENST00000549815 SERPINB13Q9UIV8 391 aa16.32■□□□□ 0.2
GCN1-206ENST00000549815 ZNF532Q9HCE3 1301 aa16.31■□□□□ 0.2
GCN1-206ENST00000549815 MAGEB6P1A0A0J9YX57 407 aa16.31■□□□□ 0.2
GCN1-206ENST00000549815 C19orf81C9J6K1 198 aa16.31■□□□□ 0.2
GCN1-206ENST00000549815 USP17L10C9JJH3 530 aa16.31■□□□□ 0.2
GCN1-206ENST00000549815 GOLIM4O00461 696 aa16.31■□□□□ 0.2
GCN1-206ENST00000549815 TNPO2O14787 897 aaKnown RBP16.31■□□□□ 0.2
GCN1-206ENST00000549815 PLCD1P51178 756 aa16.31■□□□□ 0.2
GCN1-206ENST00000549815 DNAJC2Q99543 621 aaKnown RBP16.31■□□□□ 0.2
GCN1-206ENST00000549815 MORF4L1Q9UBU8 362 aa16.31■□□□□ 0.2
GCN1-206ENST00000549815 PLXNB2O15031 1838 aa16.31■□□□□ 0.2
GCN1-206ENST00000549815 GH2P01242 217 aa16.3■□□□□ 0.2
GCN1-206ENST00000549815 CCL5P13501 91 aa16.3■□□□□ 0.2
GCN1-206ENST00000549815 ATP5JP18859 108 aa16.3■□□□□ 0.2
GCN1-206ENST00000549815 GABPAQ06546 454 aa16.3■□□□□ 0.2
GCN1-206ENST00000549815 TTC6Q86TZ1 520 aa16.3■□□□□ 0.2
GCN1-206ENST00000549815 PXYLP1Q8TE99 480 aa16.3■□□□□ 0.2
GCN1-206ENST00000549815 P2RX7Q99572 595 aaKnown RBP16.3■□□□□ 0.2
GCN1-206ENST00000549815 TMOD4Q9NZQ9 345 aa16.3■□□□□ 0.2
GCN1-206ENST00000549815 ADCY3O60266 1144 aa16.29■□□□□ 0.2
GCN1-206ENST00000549815 GJB1P08034 283 aa16.29■□□□□ 0.2
GCN1-206ENST00000549815 SHMT1P34896 483 aa16.29■□□□□ 0.2
GCN1-206ENST00000549815 GJA8P48165 433 aa16.29■□□□□ 0.2
GCN1-206ENST00000549815 UBXN2AP68543 259 aa16.29■□□□□ 0.2
GCN1-206ENST00000549815 EVX2Q03828 476 aa16.29■□□□□ 0.2
GCN1-206ENST00000549815 LCORLQ8N3X6 602 aa16.29■□□□□ 0.2
GCN1-206ENST00000549815 C12orf42Q96LP6 360 aa16.29■□□□□ 0.2
GCN1-206ENST00000549815 BOLA2Q9H3K6 86 aa16.29■□□□□ 0.2
GCN1-206ENST00000549815 EMILIN3Q9NT22 766 aa16.29■□□□□ 0.2
GCN1-206ENST00000549815 PAG1Q9NWQ8 432 aa16.29■□□□□ 0.2
GCN1-206ENST00000549815 MYH7P12883 1935 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 ELNP15502 786 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 GUCY1A2P33402 732 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 ADD2P35612 726 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 HERVK_113P62684 666 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 SLFNL1Q499Z3 407 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 USP17L2Q6R6M4 530 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 POTEEQ6S8J3 1075 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 UBE2Q1Q7Z7E8 422 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 COA7Q96BR5 231 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 HAUS7Q99871 368 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 CRNKL1Q9BZJ0 848 aaKnown RBP16.28■□□□□ 0.2
GCN1-206ENST00000549815 RNF208Q9H0X6 261 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 UNC93B1Q9H1C4 597 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 TXNRD2Q9NNW7 524 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 GJD2Q9UKL4 321 aa16.28■□□□□ 0.2
GCN1-206ENST00000549815 PEX10O60683 326 aa16.27■□□□□ 0.2
GCN1-206ENST00000549815 CHGBP05060 677 aa16.27■□□□□ 0.2
GCN1-206ENST00000549815 IRX3P78415 501 aaPredicted RBP16.27■□□□□ 0.2
GCN1-206ENST00000549815 CERKLQ49MI3 558 aaPredicted RBP16.27■□□□□ 0.2
GCN1-206ENST00000549815 NKX2-3Q8TAU0 364 aa16.27■□□□□ 0.2
GCN1-206ENST00000549815 SDR42E1Q8WUS8 393 aa16.27■□□□□ 0.2
GCN1-206ENST00000549815 LRRCC1Q9C099 1032 aa16.27■□□□□ 0.2
GCN1-206ENST00000549815 DCP1AQ9NPI6 582 aaPredicted RBP16.27■□□□□ 0.2
GCN1-206ENST00000549815 RBPJLQ9UBG7 517 aa16.27■□□□□ 0.2
GCN1-206ENST00000549815 SMARCA5O60264 1052 aaPredicted RBP16.26■□□□□ 0.19
GCN1-206ENST00000549815 INHAP05111 366 aa16.26■□□□□ 0.19
GCN1-206ENST00000549815 ABCB5Q2M3G0 1257 aa16.26■□□□□ 0.19
GCN1-206ENST00000549815 BCL11AQ9H165 835 aa16.26■□□□□ 0.19
GCN1-206ENST00000549815 DCTPP1Q9H773 170 aa16.26■□□□□ 0.19
GCN1-206ENST00000549815 ARMT1Q9H993 441 aa16.26■□□□□ 0.19
GCN1-206ENST00000549815 MCM9Q9NXL9 1143 aa16.26■□□□□ 0.19
GCN1-206ENST00000549815 BIN2Q9UBW5 565 aaPredicted RBP16.26■□□□□ 0.19
GCN1-206ENST00000549815 PRKAB2O43741 272 aa16.25■□□□□ 0.19
GCN1-206ENST00000549815 POLR3DP05423 398 aaPredicted RBP16.25■□□□□ 0.19
GCN1-206ENST00000549815 Q3C1V9 767 aa16.25■□□□□ 0.19
GCN1-206ENST00000549815 ACER1Q8TDN7 264 aa16.25■□□□□ 0.19
GCN1-206ENST00000549815 U2AF1L4Q8WU68 220 aaKnown RBP16.25■□□□□ 0.19
GCN1-206ENST00000549815 KIAA1683Q9H0B3 1180 aa16.25■□□□□ 0.19
GCN1-206ENST00000549815 BAZ2AQ9UIF9 1905 aaKnown RBP16.25■□□□□ 0.19
GCN1-206ENST00000549815 SGPL1O95470 568 aa16.24■□□□□ 0.19
GCN1-206ENST00000549815 CYP2D6P10635 497 aa16.24■□□□□ 0.19
GCN1-206ENST00000549815 RAB3GAP1Q15042 981 aa16.24■□□□□ 0.19
GCN1-206ENST00000549815 UBE3CQ15386 1083 aa16.24■□□□□ 0.19
GCN1-206ENST00000549815 GPRC5AQ8NFJ5 357 aa16.24■□□□□ 0.19
GCN1-206ENST00000549815 PAK6Q9NQU5 681 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms