RNA–Protein interactions for RNA: ENST00000548390.5

LETMD1-215, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-215ENST00000548390 LIFRP42702 1097 aa20.46■□□□□ 0.87
LETMD1-215ENST00000548390 TOB2Q14106 344 aaPredicted RBP20.46■□□□□ 0.87
LETMD1-215ENST00000548390 CHMP4CQ96CF2 233 aa20.46■□□□□ 0.87
LETMD1-215ENST00000548390 TCEANC2Q96MN5 208 aa20.46■□□□□ 0.87
LETMD1-215ENST00000548390 DEFB129Q9H1M3 183 aa20.46■□□□□ 0.87
LETMD1-215ENST00000548390 EVCP57679 992 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 TFAP4Q01664 338 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 TMEM67Q5HYA8 995 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 TATDN1Q6P1N9 297 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 CHST3Q7LGC8 479 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 SGMS1Q86VZ5 419 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 SLC44A5Q8NCS7 719 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 NEDD1Q8NHV4 660 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 IGDCC4Q8TDY8 1250 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 BRF1Q92994 677 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 DCPSQ96C86 337 aaKnown RBP20.45■□□□□ 0.86
LETMD1-215ENST00000548390 ZSCAN10Q96SZ4 725 aaPredicted RBP20.45■□□□□ 0.86
LETMD1-215ENST00000548390 TMEM39BQ9GZU3 492 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 TAF1DQ9H5J8 278 aaPredicted RBP20.45■□□□□ 0.86
LETMD1-215ENST00000548390 PGAP2Q9UHJ9 254 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 PLIN4Q96Q06 1357 aa20.45■□□□□ 0.86
LETMD1-215ENST00000548390 UTRNP46939 3433 aa20.44■□□□□ 0.86
LETMD1-215ENST00000548390 WDR90Q96KV7 1748 aa20.44■□□□□ 0.86
LETMD1-215ENST00000548390 SHMT1P34896 483 aa20.44■□□□□ 0.86
LETMD1-215ENST00000548390 MAP3K10Q02779 954 aa20.44■□□□□ 0.86
LETMD1-215ENST00000548390 COL9A3Q14050 684 aaPredicted RBP20.44■□□□□ 0.86
LETMD1-215ENST00000548390 ASTN2O75129 1339 aaPredicted RBP20.44■□□□□ 0.86
LETMD1-215ENST00000548390 SCN4AP35499 1836 aa20.43■□□□□ 0.86
LETMD1-215ENST00000548390 WTAPQ15007 396 aa20.43■□□□□ 0.86
LETMD1-215ENST00000548390 DGKHQ86XP1 1220 aa20.43■□□□□ 0.86
LETMD1-215ENST00000548390 SULF1Q8IWU6 871 aa20.43■□□□□ 0.86
LETMD1-215ENST00000548390 ZNF274Q96GC6 653 aaPredicted RBP20.43■□□□□ 0.86
LETMD1-215ENST00000548390 TMX3Q96JJ7 454 aa20.43■□□□□ 0.86
LETMD1-215ENST00000548390 TEPSINQ96N21 525 aa20.43■□□□□ 0.86
LETMD1-215ENST00000548390 LRRC2Q9BYS8 371 aa20.43■□□□□ 0.86
LETMD1-215ENST00000548390 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.43■□□□□ 0.86
LETMD1-215ENST00000548390 RCAN1P53805 252 aa20.42■□□□□ 0.86
LETMD1-215ENST00000548390 CERKLQ49MI3 558 aaPredicted RBP20.42■□□□□ 0.86
LETMD1-215ENST00000548390 FAM47AQ5JRC9 791 aa20.42■□□□□ 0.86
LETMD1-215ENST00000548390 DCAF15Q66K64 600 aa20.42■□□□□ 0.86
LETMD1-215ENST00000548390 ANKS1AQ92625 1134 aa20.42■□□□□ 0.86
LETMD1-215ENST00000548390 DNAJC18Q9H819 358 aa20.42■□□□□ 0.86
LETMD1-215ENST00000548390 LY9Q9HBG7 655 aa20.42■□□□□ 0.86
LETMD1-215ENST00000548390 TPCN1Q9ULQ1 816 aa20.42■□□□□ 0.86
LETMD1-215ENST00000548390 TNKSO95271 1327 aa20.42■□□□□ 0.86
LETMD1-215ENST00000548390 CCDC69A6NI79 296 aa20.41■□□□□ 0.86
LETMD1-215ENST00000548390 VEGFAP15692 232 aaPredicted RBP20.41■□□□□ 0.86
LETMD1-215ENST00000548390 SEC23AQ15436 765 aa20.41■□□□□ 0.86
LETMD1-215ENST00000548390 SUPT20HL1Q3ZLR7 823 aa20.41■□□□□ 0.86
LETMD1-215ENST00000548390 IFIT1BQ5T764 474 aaKnown RBP20.41■□□□□ 0.86
LETMD1-215ENST00000548390 SYNE3Q6ZMZ3 975 aa20.41■□□□□ 0.86
LETMD1-215ENST00000548390 NFXL1Q6ZNB6 911 aa20.41■□□□□ 0.86
LETMD1-215ENST00000548390 NKX2-3Q8TAU0 364 aa20.41■□□□□ 0.86
LETMD1-215ENST00000548390 POTECB2RU33 542 aa20.4■□□□□ 0.86
LETMD1-215ENST00000548390 CUL4AQ13619 759 aa20.4■□□□□ 0.86
LETMD1-215ENST00000548390 NOL8Q76FK4 1167 aaKnown RBP20.4■□□□□ 0.86
LETMD1-215ENST00000548390 ENAHQ8N8S7 591 aaPredicted RBP20.4■□□□□ 0.86
LETMD1-215ENST00000548390 GINM1Q9NU53 330 aa20.4■□□□□ 0.86
LETMD1-215ENST00000548390 HSP90AA1P07900 732 aaKnown RBP20.39■□□□□ 0.85
LETMD1-215ENST00000548390 NOVP48745 357 aa20.39■□□□□ 0.85
LETMD1-215ENST00000548390 APOBRQ0VD83 1088 aa20.39■□□□□ 0.85
LETMD1-215ENST00000548390 TMEM179Q6ZVK1 233 aa20.39■□□□□ 0.85
LETMD1-215ENST00000548390 INTS4Q96HW7 963 aaKnown RBP20.39■□□□□ 0.85
LETMD1-215ENST00000548390 ZKSCAN3Q9BRR0 538 aa20.39■□□□□ 0.85
LETMD1-215ENST00000548390 CABP5Q9NP86 173 aa20.39■□□□□ 0.85
LETMD1-215ENST00000548390 SLC12A7Q9Y666 1083 aa20.39■□□□□ 0.85
LETMD1-215ENST00000548390 KLF18A0A0U1RQI7 1052 aa20.38■□□□□ 0.85
LETMD1-215ENST00000548390 PFKFB2O60825 505 aa20.38■□□□□ 0.85
LETMD1-215ENST00000548390 AKR1B1P15121 316 aa20.38■□□□□ 0.85
LETMD1-215ENST00000548390 PPP2R5BQ15173 497 aa20.38■□□□□ 0.85
LETMD1-215ENST00000548390 ME3Q16798 604 aa20.38■□□□□ 0.85
LETMD1-215ENST00000548390 ABCB5Q2M3G0 1257 aa20.38■□□□□ 0.85
LETMD1-215ENST00000548390 SLKQ9H2G2 1235 aaPredicted RBP20.38■□□□□ 0.85
LETMD1-215ENST00000548390 IL17RBQ9NRM6 502 aa20.38■□□□□ 0.85
LETMD1-215ENST00000548390 IGKV6D-41A0A0C4DH26 115 aa20.37■□□□□ 0.85
LETMD1-215ENST00000548390 MPHOSPH10O00566 681 aaKnown RBP20.37■□□□□ 0.85
LETMD1-215ENST00000548390 DHX16O60231 1041 aaKnown RBP20.37■□□□□ 0.85
LETMD1-215ENST00000548390 DDAH1O94760 285 aa20.37■□□□□ 0.85
LETMD1-215ENST00000548390 CALM1P0DP23 149 aa20.37■□□□□ 0.85
LETMD1-215ENST00000548390 CALM2P0DP24 149 aa20.37■□□□□ 0.85
LETMD1-215ENST00000548390 CALM3P0DP25 149 aa20.37■□□□□ 0.85
LETMD1-215ENST00000548390 PDIA3P30101 505 aaKnown RBP20.37■□□□□ 0.85
LETMD1-215ENST00000548390 EAPPQ56P03 285 aaPredicted RBP20.37■□□□□ 0.85
LETMD1-215ENST00000548390 APOA5Q6Q788 366 aa20.37■□□□□ 0.85
LETMD1-215ENST00000548390 KRT26Q7Z3Y9 468 aa20.37■□□□□ 0.85
LETMD1-215ENST00000548390 CATIPQ7Z7H3 387 aa20.37■□□□□ 0.85
LETMD1-215ENST00000548390 ZNF341Q9BYN7 854 aa20.37■□□□□ 0.85
LETMD1-215ENST00000548390 KANSL2Q9H9L4 492 aa20.37■□□□□ 0.85
LETMD1-215ENST00000548390 GPHNQ9NQX3 736 aaPredicted RBP20.37■□□□□ 0.85
LETMD1-215ENST00000548390 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.37■□□□□ 0.85
LETMD1-215ENST00000548390 SIPA1L1O43166 1804 aa20.37■□□□□ 0.85
LETMD1-215ENST00000548390 FAM196BA6NMK8 535 aa20.36■□□□□ 0.85
LETMD1-215ENST00000548390 GOLGA8BA8MQT2 603 aa20.36■□□□□ 0.85
LETMD1-215ENST00000548390 ZBTB43O43298 467 aa20.36■□□□□ 0.85
LETMD1-215ENST00000548390 TTLL1O95922 423 aa20.36■□□□□ 0.85
LETMD1-215ENST00000548390 NBPF12Q5TAG4 269 aaPredicted RBP20.36■□□□□ 0.85
LETMD1-215ENST00000548390 CDC37L1Q7L3B6 337 aa20.36■□□□□ 0.85
LETMD1-215ENST00000548390 CDAN1Q8IWY9 1227 aa20.36■□□□□ 0.85
LETMD1-215ENST00000548390 GTF3C6Q969F1 213 aa20.36■□□□□ 0.85
LETMD1-215ENST00000548390 LARP6Q9BRS8 491 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms