RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 ELOA2Q8IYF1 753 aaPredicted RBP17.86■□□□□ 0.45
BRF1-212ENST00000547562 CNNM3Q8NE01 707 aa17.86■□□□□ 0.45
BRF1-212ENST00000547562 C16orf45Q96MC5 204 aaPredicted RBP17.86■□□□□ 0.45
BRF1-212ENST00000547562 MAP7D2Q96T17 732 aa17.86■□□□□ 0.45
BRF1-212ENST00000547562 XPO4Q9C0E2 1151 aaKnown RBP17.86■□□□□ 0.45
BRF1-212ENST00000547562 OSBPL5Q9H0X9 879 aaPredicted RBP17.86■□□□□ 0.45
BRF1-212ENST00000547562 USP17L12C9JPN9 530 aa17.85■□□□□ 0.45
BRF1-212ENST00000547562 USP17L21D6R901 530 aa17.85■□□□□ 0.45
BRF1-212ENST00000547562 SKILP12757 684 aa17.85■□□□□ 0.45
BRF1-212ENST00000547562 AKAP17AQ02040 695 aaKnown RBP17.85■□□□□ 0.45
BRF1-212ENST00000547562 TPTE2Q6XPS3 522 aa17.85■□□□□ 0.45
BRF1-212ENST00000547562 OXER1Q8TDS5 423 aa17.85■□□□□ 0.45
BRF1-212ENST00000547562 IFNKQ9P0W0 207 aa17.85■□□□□ 0.45
BRF1-212ENST00000547562 PCDHB6Q9Y5E3 794 aa17.85■□□□□ 0.45
BRF1-212ENST00000547562 NHSQ6T4R5 1651 aa17.85■□□□□ 0.45
BRF1-212ENST00000547562 SMC2O95347 1197 aa17.84■□□□□ 0.45
BRF1-212ENST00000547562 CCZ1BP86790 482 aa17.84■□□□□ 0.45
BRF1-212ENST00000547562 CCZ1P86791 482 aaPredicted RBP17.84■□□□□ 0.45
BRF1-212ENST00000547562 FUT2Q10981 343 aa17.84■□□□□ 0.45
BRF1-212ENST00000547562 TFCP2L1Q9NZI6 479 aa17.84■□□□□ 0.45
BRF1-212ENST00000547562 TAF1LQ8IZX4 1826 aa17.84■□□□□ 0.45
BRF1-212ENST00000547562 XBP1P17861 261 aa17.84■□□□□ 0.45
BRF1-212ENST00000547562 PKN1Q16512 942 aa17.84■□□□□ 0.45
BRF1-212ENST00000547562 SPECC1Q5M775 1068 aa17.84■□□□□ 0.45
BRF1-212ENST00000547562 SHISA4Q96DD7 197 aa17.84■□□□□ 0.45
BRF1-212ENST00000547562 RBM28Q9NW13 759 aaKnown RBP17.84■□□□□ 0.45
BRF1-212ENST00000547562 AATFQ9NY61 560 aaKnown RBP eCLIP17.84■□□□□ 0.45
BRF1-212ENST00000547562 CEP131Q9UPN4 1083 aa17.84■□□□□ 0.45
BRF1-212ENST00000547562 RIOK3O14730 519 aaKnown RBP17.83■□□□□ 0.45
BRF1-212ENST00000547562 PRPF3O43395 683 aaKnown RBP17.83■□□□□ 0.45
BRF1-212ENST00000547562 CALM1P0DP23 149 aa17.83■□□□□ 0.45
BRF1-212ENST00000547562 CALM2P0DP24 149 aa17.83■□□□□ 0.45
BRF1-212ENST00000547562 CALM3P0DP25 149 aa17.83■□□□□ 0.45
BRF1-212ENST00000547562 GRIN1Q05586 938 aa17.83■□□□□ 0.45
BRF1-212ENST00000547562 TROAPQ12815 778 aa17.83■□□□□ 0.45
BRF1-212ENST00000547562 FOXP4Q8IVH2 680 aaPredicted RBP17.83■□□□□ 0.45
BRF1-212ENST00000547562 ZNF579Q8NAF0 562 aaKnown RBP17.83■□□□□ 0.45
BRF1-212ENST00000547562 CRNKL1Q9BZJ0 848 aaKnown RBP17.83■□□□□ 0.45
BRF1-212ENST00000547562 HSD3B7Q9H2F3 369 aa17.83■□□□□ 0.45
BRF1-212ENST00000547562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.83■□□□□ 0.45
BRF1-212ENST00000547562 KIAA1551Q9HCM1 1747 aa17.83■□□□□ 0.44
BRF1-212ENST00000547562 PRDX5P30044 214 aa17.83■□□□□ 0.44
BRF1-212ENST00000547562 MDM2Q00987 491 aaPredicted RBP17.83■□□□□ 0.44
BRF1-212ENST00000547562 TPD52L1Q16890 204 aaPredicted RBP17.83■□□□□ 0.44
BRF1-212ENST00000547562 MTERF4Q7Z6M4 381 aaKnown RBP17.83■□□□□ 0.44
BRF1-212ENST00000547562 CCDC24Q8N4L8 307 aa17.83■□□□□ 0.44
BRF1-212ENST00000547562 CABP5Q9NP86 173 aa17.83■□□□□ 0.44
BRF1-212ENST00000547562 DCP1AQ9NPI6 582 aaPredicted RBP17.83■□□□□ 0.44
BRF1-212ENST00000547562 RTCBQ9Y3I0 505 aaKnown RBP17.83■□□□□ 0.44
BRF1-212ENST00000547562 PCDHA5Q9Y5H7 936 aa17.83■□□□□ 0.44
BRF1-212ENST00000547562 ORC4O43929 436 aa17.82■□□□□ 0.44
BRF1-212ENST00000547562 DDAH1O94760 285 aa17.82■□□□□ 0.44
BRF1-212ENST00000547562 TNNT1P13805 278 aa17.82■□□□□ 0.44
BRF1-212ENST00000547562 LMOD1P29536 600 aaPredicted RBP17.82■□□□□ 0.44
BRF1-212ENST00000547562 TM4SF1P30408 202 aa17.82■□□□□ 0.44
BRF1-212ENST00000547562 PHF20Q9BVI0 1012 aa17.82■□□□□ 0.44
BRF1-212ENST00000547562 ATP8A2Q9NTI2 1148 aa17.82■□□□□ 0.44
BRF1-212ENST00000547562 VPS54Q9P1Q0 977 aa17.82■□□□□ 0.44
BRF1-212ENST00000547562 HOOK1Q9UJC3 728 aaKnown RBP17.82■□□□□ 0.44
BRF1-212ENST00000547562 CCNL1Q9UK58 526 aaPredicted RBP17.82■□□□□ 0.44
BRF1-212ENST00000547562 SRPRBQ9Y5M8 271 aaKnown RBP17.82■□□□□ 0.44
BRF1-212ENST00000547562 PLEKHA8P1O95397 391 aa17.82■□□□□ 0.44
BRF1-212ENST00000547562 MYL5Q02045 173 aa17.82■□□□□ 0.44
BRF1-212ENST00000547562 TMED8Q6PL24 325 aaPredicted RBP17.82■□□□□ 0.44
BRF1-212ENST00000547562 TSC1Q92574 1164 aa17.82■□□□□ 0.44
BRF1-212ENST00000547562 TNRC6CQ9HCJ0 1690 aaKnown RBP17.82■□□□□ 0.44
BRF1-212ENST00000547562 FANCCQ00597 558 aa17.81■□□□□ 0.44
BRF1-212ENST00000547562 OLFM4Q6UX06 510 aa17.81■□□□□ 0.44
BRF1-212ENST00000547562 AMIGO3Q86WK7 504 aa17.81■□□□□ 0.44
BRF1-212ENST00000547562 V9GY48 417 aaPredicted RBP17.81■□□□□ 0.44
BRF1-212ENST00000547562 FOXN1O15353 648 aa17.81■□□□□ 0.44
BRF1-212ENST00000547562 KRT2P35908 639 aa17.81■□□□□ 0.44
BRF1-212ENST00000547562 EVX2Q03828 476 aa17.81■□□□□ 0.44
BRF1-212ENST00000547562 TMC6Q7Z403 805 aa17.81■□□□□ 0.44
BRF1-212ENST00000547562 TXNRD3Q86VQ6 643 aa17.81■□□□□ 0.44
BRF1-212ENST00000547562 ARHGEF1Q92888 912 aaKnown RBP17.81■□□□□ 0.44
BRF1-212ENST00000547562 MORC2Q9Y6X9 1032 aaPredicted RBP17.81■□□□□ 0.44
BRF1-212ENST00000547562 SBF2Q86WG5 1849 aa17.81■□□□□ 0.44
BRF1-212ENST00000547562 LY75O60449 1722 aa17.81■□□□□ 0.44
BRF1-212ENST00000547562 THSD7AQ9UPZ6 1657 aa17.81■□□□□ 0.44
BRF1-212ENST00000547562 IRS2Q9Y4H2 1338 aa17.8■□□□□ 0.44
BRF1-212ENST00000547562 ZBTB22O15209 634 aa17.8■□□□□ 0.44
BRF1-212ENST00000547562 POLR2DO15514 142 aaKnown RBP17.8■□□□□ 0.44
BRF1-212ENST00000547562 ATP1A3P13637 1013 aa17.8■□□□□ 0.44
BRF1-212ENST00000547562 ATP2B1P20020 1258 aa17.8■□□□□ 0.44
BRF1-212ENST00000547562 TMTC3Q6ZXV5 915 aa17.8■□□□□ 0.44
BRF1-212ENST00000547562 CCDC150Q8NCX0 1101 aa17.8■□□□□ 0.44
BRF1-212ENST00000547562 ARPP21Q9UBL0 812 aaPredicted RBP17.8■□□□□ 0.44
BRF1-212ENST00000547562 BAZ2BQ9UIF8 2168 aaKnown RBP17.8■□□□□ 0.44
BRF1-212ENST00000547562 hCG_1642624A0A1W2PR95 340 aa17.8■□□□□ 0.44
BRF1-212ENST00000547562 USP27XA6NNY8 438 aa17.8■□□□□ 0.44
BRF1-212ENST00000547562 POSTNQ15063 836 aa17.8■□□□□ 0.44
BRF1-212ENST00000547562 SBK1Q52WX2 424 aa17.8■□□□□ 0.44
BRF1-212ENST00000547562 FNBP4Q8N3X1 1017 aaPredicted RBP17.8■□□□□ 0.44
BRF1-212ENST00000547562 FAM205CA6NFA0 338 aa17.79■□□□□ 0.44
BRF1-212ENST00000547562 TRIM75PA6NK02 468 aa17.79■□□□□ 0.44
BRF1-212ENST00000547562 BMP6P22004 513 aa17.79■□□□□ 0.44
BRF1-212ENST00000547562 DHX8Q14562 1220 aaKnown RBP17.79■□□□□ 0.44
BRF1-212ENST00000547562 NOL10Q9BSC4 688 aaKnown RBP17.79■□□□□ 0.44
BRF1-212ENST00000547562 KCND1Q9NSA2 647 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms