RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZBTB21Q9ULJ3 1066 aa16.23■□□□□ 0.19
CPSF6-204ENST00000547486 MAST2Q6P0Q8 1798 aa16.23■□□□□ 0.19
CPSF6-204ENST00000547486 PTPRFP10586 1907 aa16.22■□□□□ 0.19
CPSF6-204ENST00000547486 TCRBV5S4A2TA0A5A2 114 aa16.22■□□□□ 0.19
CPSF6-204ENST00000547486 GOLIM4O00461 696 aa16.22■□□□□ 0.19
CPSF6-204ENST00000547486 ADCY3O60266 1144 aa16.22■□□□□ 0.19
CPSF6-204ENST00000547486 GH2P01242 217 aa16.22■□□□□ 0.19
CPSF6-204ENST00000547486 ELNP15502 786 aa16.22■□□□□ 0.19
CPSF6-204ENST00000547486 PLCD1P51178 756 aa16.22■□□□□ 0.19
CPSF6-204ENST00000547486 EVX2Q03828 476 aa16.22■□□□□ 0.19
CPSF6-204ENST00000547486 TTF1Q15361 905 aaPredicted RBP16.22■□□□□ 0.19
CPSF6-204ENST00000547486 FAM110CQ1W6H9 321 aa16.22■□□□□ 0.19
CPSF6-204ENST00000547486 SLFNL1Q499Z3 407 aa16.22■□□□□ 0.19
CPSF6-204ENST00000547486 TMED8Q6PL24 325 aaPredicted RBP16.22■□□□□ 0.19
CPSF6-204ENST00000547486 CERS3Q8IU89 383 aa16.22■□□□□ 0.19
CPSF6-204ENST00000547486 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.22■□□□□ 0.19
CPSF6-204ENST00000547486 DNAJC2Q99543 621 aaKnown RBP16.22■□□□□ 0.19
CPSF6-204ENST00000547486 P2RX7Q99572 595 aaKnown RBP16.22■□□□□ 0.19
CPSF6-204ENST00000547486 BIN2Q9UBW5 565 aaPredicted RBP16.22■□□□□ 0.19
CPSF6-204ENST00000547486 RBBP6Q7Z6E9 1792 aaKnown RBP16.22■□□□□ 0.19
CPSF6-204ENST00000547486 MAGEB6P1A0A0J9YX57 407 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 C19orf81C9J6K1 198 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 USP17L10C9JJH3 530 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 HOXA7P31268 230 aaPredicted RBP16.21■□□□□ 0.19
CPSF6-204ENST00000547486 GCLCP48506 637 aaPredicted RBP16.21■□□□□ 0.19
CPSF6-204ENST00000547486 PABPC4Q13310 644 aaKnown RBP eCLIP16.21■□□□□ 0.19
CPSF6-204ENST00000547486 PDE3AQ14432 1141 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 POTEEQ6S8J3 1075 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 SLAIN1Q8ND83 568 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 RNF208Q9H0X6 261 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 UNC93B1Q9H1C4 597 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 EHD4Q9H223 541 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 EMILIN3Q9NT22 766 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 GINM1Q9NU53 330 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 TMOD4Q9NZQ9 345 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 SERPINB13Q9UIV8 391 aa16.21■□□□□ 0.19
CPSF6-204ENST00000547486 ZNF532Q9HCE3 1301 aa16.2■□□□□ 0.18
CPSF6-204ENST00000547486 GJB1P08034 283 aa16.2■□□□□ 0.18
CPSF6-204ENST00000547486 GJA8P48165 433 aa16.2■□□□□ 0.18
CPSF6-204ENST00000547486 IRF5Q13568 498 aa16.2■□□□□ 0.18
CPSF6-204ENST00000547486 PXYLP1Q8TE99 480 aa16.2■□□□□ 0.18
CPSF6-204ENST00000547486 BOLA2Q9H3K6 86 aa16.2■□□□□ 0.18
CPSF6-204ENST00000547486 CHMP4BQ9H444 224 aaKnown RBP16.2■□□□□ 0.18
CPSF6-204ENST00000547486 TXNRD2Q9NNW7 524 aa16.2■□□□□ 0.18
CPSF6-204ENST00000547486 GJD2Q9UKL4 321 aa16.2■□□□□ 0.18
CPSF6-204ENST00000547486 CDK5RAP2Q96SN8 1893 aa16.19■□□□□ 0.18
CPSF6-204ENST00000547486 SMARCA5O60264 1052 aaPredicted RBP16.19■□□□□ 0.18
CPSF6-204ENST00000547486 CHGBP05060 677 aa16.19■□□□□ 0.18
CPSF6-204ENST00000547486 ATP5JP18859 108 aa16.19■□□□□ 0.18
CPSF6-204ENST00000547486 SHMT1P34896 483 aa16.19■□□□□ 0.18
CPSF6-204ENST00000547486 UBXN2AP68543 259 aa16.19■□□□□ 0.18
CPSF6-204ENST00000547486 TTC6Q86TZ1 520 aa16.19■□□□□ 0.18
CPSF6-204ENST00000547486 LCORLQ8N3X6 602 aa16.19■□□□□ 0.18
CPSF6-204ENST00000547486 COA7Q96BR5 231 aa16.19■□□□□ 0.18
CPSF6-204ENST00000547486 MORF4L1Q9UBU8 362 aa16.19■□□□□ 0.18
CPSF6-204ENST00000547486 INHAP05111 366 aa16.18■□□□□ 0.18
CPSF6-204ENST00000547486 HERVK_113P62684 666 aa16.18■□□□□ 0.18
CPSF6-204ENST00000547486 IRX3P78415 501 aaPredicted RBP16.18■□□□□ 0.18
CPSF6-204ENST00000547486 GABPAQ06546 454 aa16.18■□□□□ 0.18
CPSF6-204ENST00000547486 Q3C1V9 767 aa16.18■□□□□ 0.18
CPSF6-204ENST00000547486 CERKLQ49MI3 558 aaPredicted RBP16.18■□□□□ 0.18
CPSF6-204ENST00000547486 UBE2Q1Q7Z7E8 422 aa16.18■□□□□ 0.18
CPSF6-204ENST00000547486 ACER1Q8TDN7 264 aa16.18■□□□□ 0.18
CPSF6-204ENST00000547486 SDR42E1Q8WUS8 393 aa16.18■□□□□ 0.18
CPSF6-204ENST00000547486 PAG1Q9NWQ8 432 aa16.18■□□□□ 0.18
CPSF6-204ENST00000547486 RBPJLQ9UBG7 517 aa16.18■□□□□ 0.18
CPSF6-204ENST00000547486 TAOK2Q9UL54 1235 aa16.18■□□□□ 0.18
CPSF6-204ENST00000547486 LOC285556D6RIA3 1793 aa16.18■□□□□ 0.18
CPSF6-204ENST00000547486 FOCADQ5VW36 1801 aa16.17■□□□□ 0.18
CPSF6-204ENST00000547486 ATAD5Q96QE3 1844 aa16.17■□□□□ 0.18
CPSF6-204ENST00000547486 PRKAB2O43741 272 aa16.17■□□□□ 0.18
CPSF6-204ENST00000547486 POLR3DP05423 398 aaPredicted RBP16.17■□□□□ 0.18
CPSF6-204ENST00000547486 GUCY1A2P33402 732 aa16.17■□□□□ 0.18
CPSF6-204ENST00000547486 RAB3GAP1Q15042 981 aa16.17■□□□□ 0.18
CPSF6-204ENST00000547486 ZYXQ15942 572 aaKnown RBP16.17■□□□□ 0.18
CPSF6-204ENST00000547486 ABCB5Q2M3G0 1257 aa16.17■□□□□ 0.18
CPSF6-204ENST00000547486 USP17L2Q6R6M4 530 aa16.17■□□□□ 0.18
CPSF6-204ENST00000547486 NKX2-3Q8TAU0 364 aa16.17■□□□□ 0.18
CPSF6-204ENST00000547486 U2AF1L4Q8WU68 220 aaKnown RBP16.17■□□□□ 0.18
CPSF6-204ENST00000547486 HAUS7Q99871 368 aa16.17■□□□□ 0.18
CPSF6-204ENST00000547486 CRNKL1Q9BZJ0 848 aaKnown RBP16.17■□□□□ 0.18
CPSF6-204ENST00000547486 ARMT1Q9H993 441 aa16.17■□□□□ 0.18
CPSF6-204ENST00000547486 MCM9Q9NXL9 1143 aa16.17■□□□□ 0.18
CPSF6-204ENST00000547486 SGPL1O95470 568 aa16.16■□□□□ 0.18
CPSF6-204ENST00000547486 CYP2D6P10635 497 aa16.16■□□□□ 0.18
CPSF6-204ENST00000547486 ADD2P35612 726 aa16.16■□□□□ 0.18
CPSF6-204ENST00000547486 GPRC5AQ8NFJ5 357 aa16.16■□□□□ 0.18
CPSF6-204ENST00000547486 LRRCC1Q9C099 1032 aa16.16■□□□□ 0.18
CPSF6-204ENST00000547486 DCP1AQ9NPI6 582 aaPredicted RBP16.16■□□□□ 0.18
CPSF6-204ENST00000547486 MGAMO43451 1857 aa16.16■□□□□ 0.18
CPSF6-204ENST00000547486 SMIM22K7EJ46 135 aa16.15■□□□□ 0.18
CPSF6-204ENST00000547486 TRIM32Q13049 653 aa16.15■□□□□ 0.18
CPSF6-204ENST00000547486 C12orf42Q96LP6 360 aa16.15■□□□□ 0.18
CPSF6-204ENST00000547486 H0YGN5 161 aa16.14■□□□□ 0.17
CPSF6-204ENST00000547486 SEPT2Q15019 361 aa16.14■□□□□ 0.17
CPSF6-204ENST00000547486 POTEDQ86YR6 584 aa16.14■□□□□ 0.17
CPSF6-204ENST00000547486 DYNLL2Q96FJ2 89 aa16.14■□□□□ 0.17
CPSF6-204ENST00000547486 DEFB118Q96PH6 123 aa16.14■□□□□ 0.17
CPSF6-204ENST00000547486 KIAA1683Q9H0B3 1180 aa16.14■□□□□ 0.17
CPSF6-204ENST00000547486 PORCNQ9H237 461 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms