RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 CCL15Q16663 113 aa20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 NOM1Q5C9Z4 860 aaKnown RBP20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 CWC27Q6UX04 472 aaKnown RBP20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 FAM43AQ8N2R8 423 aa20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 ZNF296Q8WUU4 475 aaPredicted RBP20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 NOL10Q9BSC4 688 aaKnown RBP20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 DNAJC18Q9H819 358 aa20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 PAG1Q9NWQ8 432 aa20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 PALD1Q9ULE6 856 aa20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 KCNH4Q9UQ05 1017 aa20.44■□□□□ 0.86
RBFOX1-207ENST00000547338 GPR25O00155 361 aa20.43■□□□□ 0.86
RBFOX1-207ENST00000547338 PPATQ06203 517 aa20.43■□□□□ 0.86
RBFOX1-207ENST00000547338 TTF1Q15361 905 aaPredicted RBP20.43■□□□□ 0.86
RBFOX1-207ENST00000547338 ALDH1A1P00352 501 aa20.43■□□□□ 0.86
RBFOX1-207ENST00000547338 CRHR2Q13324 411 aa20.43■□□□□ 0.86
RBFOX1-207ENST00000547338 SLC9C2Q5TAH2 1124 aa20.43■□□□□ 0.86
RBFOX1-207ENST00000547338 TMED8Q6PL24 325 aaPredicted RBP20.43■□□□□ 0.86
RBFOX1-207ENST00000547338 METTL16Q86W50 562 aaKnown RBP20.43■□□□□ 0.86
RBFOX1-207ENST00000547338 SCYL3Q8IZE3 742 aa20.43■□□□□ 0.86
RBFOX1-207ENST00000547338 SNX14Q9Y5W7 946 aa20.43■□□□□ 0.86
RBFOX1-207ENST00000547338 PTPRFP10586 1907 aa20.42■□□□□ 0.86
RBFOX1-207ENST00000547338 ZNF532Q9HCE3 1301 aa20.42■□□□□ 0.86
RBFOX1-207ENST00000547338 MYH1P12882 1939 aa20.42■□□□□ 0.86
RBFOX1-207ENST00000547338 MYH7P12883 1935 aa20.42■□□□□ 0.86
RBFOX1-207ENST00000547338 BAG4O95429 457 aaKnown RBP20.42■□□□□ 0.86
RBFOX1-207ENST00000547338 ZKSCAN1P17029 563 aaPredicted RBP20.42■□□□□ 0.86
RBFOX1-207ENST00000547338 PTPRAP18433 802 aa20.42■□□□□ 0.86
RBFOX1-207ENST00000547338 MCOLN1Q9GZU1 580 aa20.42■□□□□ 0.86
RBFOX1-207ENST00000547338 ATAD5Q96QE3 1844 aa20.41■□□□□ 0.86
RBFOX1-207ENST00000547338 CTNND1O60716 968 aaKnown RBP20.41■□□□□ 0.86
RBFOX1-207ENST00000547338 PSMA5P28066 241 aa20.41■□□□□ 0.86
RBFOX1-207ENST00000547338 CAP1Q01518 475 aa20.41■□□□□ 0.86
RBFOX1-207ENST00000547338 SNAPC2Q13487 334 aa20.41■□□□□ 0.86
RBFOX1-207ENST00000547338 RNF20Q5VTR2 975 aa20.41■□□□□ 0.86
RBFOX1-207ENST00000547338 CCDC84Q86UT8 332 aaPredicted RBP20.41■□□□□ 0.86
RBFOX1-207ENST00000547338 MAP4K1Q92918 833 aa20.41■□□□□ 0.86
RBFOX1-207ENST00000547338 ZSCAN31Q96LW9 406 aaPredicted RBP20.41■□□□□ 0.86
RBFOX1-207ENST00000547338 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.41■□□□□ 0.86
RBFOX1-207ENST00000547338 FOXD4L1Q9NU39 408 aa20.41■□□□□ 0.86
RBFOX1-207ENST00000547338 HTTP42858 3142 aa20.4■□□□□ 0.86
RBFOX1-207ENST00000547338 BTBD19C9JJ37 291 aa20.4■□□□□ 0.86
RBFOX1-207ENST00000547338 JAG1P78504 1218 aa20.4■□□□□ 0.86
RBFOX1-207ENST00000547338 ABHD8Q96I13 439 aa20.4■□□□□ 0.86
RBFOX1-207ENST00000547338 ALDH8A1Q9H2A2 487 aaPredicted RBP20.4■□□□□ 0.86
RBFOX1-207ENST00000547338 DHX36Q9H2U1 1008 aaKnown RBP20.4■□□□□ 0.86
RBFOX1-207ENST00000547338 SAP30BPQ9UHR5 308 aaKnown RBP20.4■□□□□ 0.86
RBFOX1-207ENST00000547338 CCDC171Q6TFL3 1326 aa20.39■□□□□ 0.86
RBFOX1-207ENST00000547338 CETPP11597 493 aa20.39■□□□□ 0.85
RBFOX1-207ENST00000547338 ADD2P35612 726 aa20.39■□□□□ 0.85
RBFOX1-207ENST00000547338 DGKZQ13574 1117 aa20.39■□□□□ 0.85
RBFOX1-207ENST00000547338 NECTIN1Q15223 517 aa20.39■□□□□ 0.85
RBFOX1-207ENST00000547338 SHROOM1Q2M3G4 852 aaPredicted RBP20.39■□□□□ 0.85
RBFOX1-207ENST00000547338 VPS53Q5VIR6 699 aa20.39■□□□□ 0.85
RBFOX1-207ENST00000547338 TTC14Q96N46 770 aa20.39■□□□□ 0.85
RBFOX1-207ENST00000547338 PI4KBQ9UBF8 816 aa20.39■□□□□ 0.85
RBFOX1-207ENST00000547338 AFG3L2Q9Y4W6 797 aa20.39■□□□□ 0.85
RBFOX1-207ENST00000547338 EVX2Q03828 476 aa20.38■□□□□ 0.85
RBFOX1-207ENST00000547338 SLC4A8Q2Y0W8 1093 aa20.38■□□□□ 0.85
RBFOX1-207ENST00000547338 TSGA10IPQ3SY00 556 aa20.38■□□□□ 0.85
RBFOX1-207ENST00000547338 LCORLQ8N3X6 602 aa20.38■□□□□ 0.85
RBFOX1-207ENST00000547338 FSD1Q9BTV5 496 aa20.38■□□□□ 0.85
RBFOX1-207ENST00000547338 IL25Q9H293 177 aa20.38■□□□□ 0.85
RBFOX1-207ENST00000547338 HERC5Q9UII4 1024 aaKnown RBP20.38■□□□□ 0.85
RBFOX1-207ENST00000547338 LIMCH1Q9UPQ0 1083 aa20.38■□□□□ 0.85
RBFOX1-207ENST00000547338 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.38■□□□□ 0.85
RBFOX1-207ENST00000547338 ZHX2Q9Y6X8 837 aa20.38■□□□□ 0.85
RBFOX1-207ENST00000547338 NAV1Q8NEY1 1877 aa20.38■□□□□ 0.85
RBFOX1-207ENST00000547338 MAGEB6P1A0A0J9YX57 407 aa20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 FSD2A1L4K1 749 aa20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 GOLGA6L3A6NEY3 463 aa20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 KLHL40Q2TBA0 621 aa20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 CERS3Q8IU89 383 aa20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 ZSWIM6Q9HCJ5 1215 aa20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 SH2B1Q9NRF2 756 aaPredicted RBP20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 FKTNO75072 461 aa20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 CAPN15O75808 1086 aa20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 LRRFIP1Q32MZ4 808 aaKnown RBP20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 OTUD7BQ6GQQ9 843 aa20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 GPAT2Q6NUI2 795 aa20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 CTU1Q7Z7A3 348 aaKnown RBP20.37■□□□□ 0.85
RBFOX1-207ENST00000547338 CXCL11O14625 94 aa20.36■□□□□ 0.85
RBFOX1-207ENST00000547338 CAP2P40123 477 aa20.36■□□□□ 0.85
RBFOX1-207ENST00000547338 PICK1Q9NRD5 415 aa20.36■□□□□ 0.85
RBFOX1-207ENST00000547338 CYP46A1Q9Y6A2 500 aa20.36■□□□□ 0.85
RBFOX1-207ENST00000547338 ADGRA2Q96PE1 1338 aa20.35■□□□□ 0.85
RBFOX1-207ENST00000547338 A0A0G2JLL6 359 aaPredicted RBP20.35■□□□□ 0.85
RBFOX1-207ENST00000547338 BRD1O95696 1058 aa20.35■□□□□ 0.85
RBFOX1-207ENST00000547338 USP5P45974 858 aa20.35■□□□□ 0.85
RBFOX1-207ENST00000547338 NMIQ13287 307 aaPredicted RBP20.35■□□□□ 0.85
RBFOX1-207ENST00000547338 KRT32Q14532 448 aa20.35■□□□□ 0.85
RBFOX1-207ENST00000547338 ANKRD1Q15327 319 aa20.35■□□□□ 0.85
RBFOX1-207ENST00000547338 TAF1CQ15572 869 aaPredicted RBP20.35■□□□□ 0.85
RBFOX1-207ENST00000547338 PRRT2Q7Z6L0 340 aaPredicted RBP20.35■□□□□ 0.85
RBFOX1-207ENST00000547338 ARMT1Q9H993 441 aa20.35■□□□□ 0.85
RBFOX1-207ENST00000547338 ZCCHC17Q9NP64 241 aaKnown RBP20.35■□□□□ 0.85
RBFOX1-207ENST00000547338 ZSWIM8A7E2V4 1837 aa20.34■□□□□ 0.85
RBFOX1-207ENST00000547338 PRKAB2O43741 272 aa20.34■□□□□ 0.85
RBFOX1-207ENST00000547338 UBE3CQ15386 1083 aa20.34■□□□□ 0.85
RBFOX1-207ENST00000547338 ANKRD23Q86SG2 305 aa20.34■□□□□ 0.85
RBFOX1-207ENST00000547338 FOXP4Q8IVH2 680 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms