RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 STX6O43752 255 aa19.17■□□□□ 0.66
BRF1-208ENST00000546997 LMNB1P20700 586 aa19.17■□□□□ 0.66
BRF1-208ENST00000546997 UBE2HP62256 183 aa19.17■□□□□ 0.66
BRF1-208ENST00000546997 AGBL3Q8NEM8 1001 aa19.17■□□□□ 0.66
BRF1-208ENST00000546997 KIAA1524Q8TCG1 905 aa19.17■□□□□ 0.66
BRF1-208ENST00000546997 USP40Q9NVE5 1235 aa19.17■□□□□ 0.66
BRF1-208ENST00000546997 ZSCAN22P10073 491 aaPredicted RBP19.17■□□□□ 0.66
BRF1-208ENST00000546997 CFAP100Q494V2 611 aa19.17■□□□□ 0.66
BRF1-208ENST00000546997 CHST3Q7LGC8 479 aa19.17■□□□□ 0.66
BRF1-208ENST00000546997 MB21D2Q8IYB1 491 aaPredicted RBP19.17■□□□□ 0.66
BRF1-208ENST00000546997 LRRC2Q9BYS8 371 aa19.17■□□□□ 0.66
BRF1-208ENST00000546997 ARPP21Q9UBL0 812 aaPredicted RBP19.17■□□□□ 0.66
BRF1-208ENST00000546997 ANAPC4Q9UJX5 808 aa19.17■□□□□ 0.66
BRF1-208ENST00000546997 ATP6V1DQ9Y5K8 247 aa19.17■□□□□ 0.66
BRF1-208ENST00000546997 SHTN1A0MZ66 631 aa19.16■□□□□ 0.66
BRF1-208ENST00000546997 GOLGA6L6A8MZA4 724 aa19.16■□□□□ 0.66
BRF1-208ENST00000546997 PPP4R3BQ5MIZ7 849 aa19.16■□□□□ 0.66
BRF1-208ENST00000546997 AKNAD1Q5T1N1 836 aa19.16■□□□□ 0.66
BRF1-208ENST00000546997 PDCL2Q8N4E4 241 aa19.16■□□□□ 0.66
BRF1-208ENST00000546997 NCOA7Q8NI08 942 aa19.16■□□□□ 0.66
BRF1-208ENST00000546997 DDX4Q9NQI0 724 aaKnown RBP19.16■□□□□ 0.66
BRF1-208ENST00000546997 SAP30BPQ9UHR5 308 aaKnown RBP19.16■□□□□ 0.66
BRF1-208ENST00000546997 HMGB1P09429 215 aaKnown RBP19.15■□□□□ 0.66
BRF1-208ENST00000546997 CACNB3P54284 484 aa19.15■□□□□ 0.66
BRF1-208ENST00000546997 NFIAQ12857 509 aa19.15■□□□□ 0.66
BRF1-208ENST00000546997 PICALMQ13492 652 aa19.15■□□□□ 0.66
BRF1-208ENST00000546997 TNIP1Q15025 636 aa19.15■□□□□ 0.66
BRF1-208ENST00000546997 DHX32Q7L7V1 743 aaKnown RBP19.15■□□□□ 0.66
BRF1-208ENST00000546997 STAG1Q8WVM7 1258 aa19.15■□□□□ 0.66
BRF1-208ENST00000546997 PRMT6Q96LA8 375 aaPredicted RBP19.15■□□□□ 0.66
BRF1-208ENST00000546997 B4E1Z4 1266 aa19.15■□□□□ 0.66
BRF1-208ENST00000546997 ANTXR2P58335 489 aa19.15■□□□□ 0.66
BRF1-208ENST00000546997 EXOSC10Q01780 885 aaKnown RBP19.15■□□□□ 0.66
BRF1-208ENST00000546997 SBK1Q52WX2 424 aa19.15■□□□□ 0.66
BRF1-208ENST00000546997 MFSD6Q6ZSS7 791 aa19.15■□□□□ 0.66
BRF1-208ENST00000546997 Q6ZUG5 572 aa19.15■□□□□ 0.66
BRF1-208ENST00000546997 RALYLQ86SE5 291 aaKnown RBP19.15■□□□□ 0.66
BRF1-208ENST00000546997 OGFOD1Q8N543 542 aa19.15■□□□□ 0.66
BRF1-208ENST00000546997 PRDM10Q9NQV6 1147 aa19.15■□□□□ 0.66
BRF1-208ENST00000546997 EIF6P56537 245 aaKnown RBP19.14■□□□□ 0.65
BRF1-208ENST00000546997 C12orf60Q5U649 245 aa19.14■□□□□ 0.65
BRF1-208ENST00000546997 SPDYE2BA6NHP3 402 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 SPDYE6P0CI01 402 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 TRDNQ13061 729 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 FUCA2Q9BTY2 467 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 ZHX1Q9UKY1 873 aaPredicted RBP19.13■□□□□ 0.65
BRF1-208ENST00000546997 GJA3Q9Y6H8 435 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 MYH8P13535 1937 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 SIPA1L1O43166 1804 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 SPDYE4A6NLX3 237 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 DTNBO60941 627 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 GADD45BO75293 160 aaPredicted RBP19.13■□□□□ 0.65
BRF1-208ENST00000546997 PDIA4P13667 645 aaKnown RBP19.13■□□□□ 0.65
BRF1-208ENST00000546997 PLCD1P51178 756 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 CYB5R4Q7L1T6 521 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 TDRD3Q9H7E2 651 aaKnown RBP19.13■□□□□ 0.65
BRF1-208ENST00000546997 HDAC9Q9UKV0 1011 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 TCHHQ07283 1943 aa19.13■□□□□ 0.65
BRF1-208ENST00000546997 PRDM1O75626 825 aa19.12■□□□□ 0.65
BRF1-208ENST00000546997 F13A1P00488 732 aa19.12■□□□□ 0.65
BRF1-208ENST00000546997 GMPSP49915 693 aaPredicted RBP19.12■□□□□ 0.65
BRF1-208ENST00000546997 RRP12Q5JTH9 1297 aaKnown RBP19.12■□□□□ 0.65
BRF1-208ENST00000546997 TTC12Q9H892 705 aaPredicted RBP19.12■□□□□ 0.65
BRF1-208ENST00000546997 GPHNQ9NQX3 736 aaPredicted RBP19.12■□□□□ 0.65
BRF1-208ENST00000546997 TOMM22Q9NS69 142 aa19.12■□□□□ 0.65
BRF1-208ENST00000546997 MTMR6Q9Y217 621 aa19.12■□□□□ 0.65
BRF1-208ENST00000546997 ROBO3Q96MS0 1386 aa19.12■□□□□ 0.65
BRF1-208ENST00000546997 PRC1O43663 620 aa19.12■□□□□ 0.65
BRF1-208ENST00000546997 FOXD4L6Q3SYB3 417 aaPredicted RBP19.12■□□□□ 0.65
BRF1-208ENST00000546997 FOXD4L3Q6VB84 417 aaPredicted RBP19.12■□□□□ 0.65
BRF1-208ENST00000546997 DYNLL2Q96FJ2 89 aa19.12■□□□□ 0.65
BRF1-208ENST00000546997 RNF41Q9H4P4 317 aaPredicted RBP19.12■□□□□ 0.65
BRF1-208ENST00000546997 EGFRP00533 1210 aa19.11■□□□□ 0.65
BRF1-208ENST00000546997 POLR3DP05423 398 aaPredicted RBP19.11■□□□□ 0.65
BRF1-208ENST00000546997 FGRP09769 529 aa19.11■□□□□ 0.65
BRF1-208ENST00000546997 CBX1P83916 185 aa19.11■□□□□ 0.65
BRF1-208ENST00000546997 STK3Q13188 491 aa19.11■□□□□ 0.65
BRF1-208ENST00000546997 DLGAP5Q15398 846 aa19.11■□□□□ 0.65
BRF1-208ENST00000546997 ZFPM1Q8IX07 1006 aa19.11■□□□□ 0.65
BRF1-208ENST00000546997 CNNM2Q9H8M5 875 aa19.11■□□□□ 0.65
BRF1-208ENST00000546997 RNF181Q9P0P0 153 aa19.11■□□□□ 0.65
BRF1-208ENST00000546997 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.11■□□□□ 0.65
BRF1-208ENST00000546997 RPS12P25398 132 aaKnown RBP19.1■□□□□ 0.65
BRF1-208ENST00000546997 GPR162Q16538 588 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 BRF1Q92994 677 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 GTF3C6Q969F1 213 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 AGXT2Q9BYV1 514 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 OSBPL5Q9H0X9 879 aaPredicted RBP19.1■□□□□ 0.65
BRF1-208ENST00000546997 OGFRQ9NZT2 677 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 ZSWIM5Q9P217 1185 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 FAM198AQ9UFP1 575 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 TCP10Q12799 353 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 MICALL2Q8IY33 904 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 SLC44A5Q8NCS7 719 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 IDI2Q9BXS1 227 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 KRT23Q9C075 422 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 MYOZ2Q9NPC6 264 aa19.1■□□□□ 0.65
BRF1-208ENST00000546997 CLRN2A0PK11 232 aa19.09■□□□□ 0.65
BRF1-208ENST00000546997 ZNF280AP59817 542 aaPredicted RBP19.09■□□□□ 0.65
BRF1-208ENST00000546997 FGD1P98174 961 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms