RNA–Protein interactions for RNA: ENST00000546653.5

VDR-203, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-203ENST00000546653 MAP3K12Q12852 859 aa16.61■□□□□ 0.25
VDR-203ENST00000546653 MTMR2Q13614 643 aa16.61■□□□□ 0.25
VDR-203ENST00000546653 ATG9AQ7Z3C6 839 aa16.61■□□□□ 0.25
VDR-203ENST00000546653 PLEKHH3Q7Z736 793 aa16.61■□□□□ 0.25
VDR-203ENST00000546653 CHD7Q9P2D1 2997 aa16.61■□□□□ 0.25
VDR-203ENST00000546653 TRIM43BA6NCK2 446 aa16.6■□□□□ 0.25
VDR-203ENST00000546653 PHKA1P46020 1223 aa16.6■□□□□ 0.25
VDR-203ENST00000546653 MAP2K5Q13163 448 aa16.6■□□□□ 0.25
VDR-203ENST00000546653 SLC39A5Q6ZMH5 540 aa16.6■□□□□ 0.25
VDR-203ENST00000546653 SH3RF1Q7Z6J0 888 aa16.6■□□□□ 0.25
VDR-203ENST00000546653 TRIM43Q96BQ3 446 aaPredicted RBP16.6■□□□□ 0.25
VDR-203ENST00000546653 WDR18Q9BV38 432 aa16.6■□□□□ 0.25
VDR-203ENST00000546653 PRDM5Q9NQX1 630 aaPredicted RBP16.6■□□□□ 0.25
VDR-203ENST00000546653 PDLIM7Q9NR12 457 aa16.6■□□□□ 0.25
VDR-203ENST00000546653 DENND2AQ9ULE3 1009 aa16.6■□□□□ 0.25
VDR-203ENST00000546653 SEMA3EO15041 775 aa16.59■□□□□ 0.25
VDR-203ENST00000546653 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
VDR-203ENST00000546653 EPHB4P54760 987 aa16.59■□□□□ 0.25
VDR-203ENST00000546653 BACE1P56817 501 aa16.59■□□□□ 0.25
VDR-203ENST00000546653 JAG1P78504 1218 aa16.59■□□□□ 0.25
VDR-203ENST00000546653 SNX17Q15036 470 aa16.59■□□□□ 0.25
VDR-203ENST00000546653 TRPV1Q8NER1 839 aa16.59■□□□□ 0.25
VDR-203ENST00000546653 ZNF384Q8TF68 577 aa16.59■□□□□ 0.25
VDR-203ENST00000546653 AS3MTQ9HBK9 375 aa16.59■□□□□ 0.25
VDR-203ENST00000546653 GNL3LQ9NVN8 582 aaKnown RBP16.59■□□□□ 0.25
VDR-203ENST00000546653 GPR75-ASB3A0A0A6YYF3 556 aa16.58■□□□□ 0.24
VDR-203ENST00000546653 ATP2B3Q16720 1220 aa16.58■□□□□ 0.24
VDR-203ENST00000546653 TRIM60Q495X7 471 aa16.58■□□□□ 0.24
VDR-203ENST00000546653 GJC2Q5T442 439 aaPredicted RBP16.58■□□□□ 0.24
VDR-203ENST00000546653 MFSD14CQ5VZR4 134 aa16.58■□□□□ 0.24
VDR-203ENST00000546653 DZIP1Q86YF9 867 aaKnown RBP16.58■□□□□ 0.24
VDR-203ENST00000546653 EDC3Q96F86 508 aaKnown RBP16.58■□□□□ 0.24
VDR-203ENST00000546653 PAGR1Q9BTK6 254 aa16.58■□□□□ 0.24
VDR-203ENST00000546653 MROH7-TTC4A0A0A0MT08 1334 aa16.58■□□□□ 0.24
VDR-203ENST00000546653 ZBTB22O15209 634 aa16.57■□□□□ 0.24
VDR-203ENST00000546653 MSCO60682 206 aa16.57■□□□□ 0.24
VDR-203ENST00000546653 IGHA2P01877 340 aa16.57■□□□□ 0.24
VDR-203ENST00000546653 ITGB8P26012 769 aa16.57■□□□□ 0.24
VDR-203ENST00000546653 CNGA1P29973 690 aa16.57■□□□□ 0.24
VDR-203ENST00000546653 ADAMTS19Q8TE59 1207 aa16.57■□□□□ 0.24
VDR-203ENST00000546653 ATXN2LQ8WWM7 1075 aaKnown RBP16.57■□□□□ 0.24
VDR-203ENST00000546653 ASB2Q96Q27 587 aa16.57■□□□□ 0.24
VDR-203ENST00000546653 TMOD4Q9NZQ9 345 aa16.57■□□□□ 0.24
VDR-203ENST00000546653 NDUFB9Q9Y6M9 179 aa16.57■□□□□ 0.24
VDR-203ENST00000546653 TCF20Q9UGU0 1960 aaKnown RBP16.57■□□□□ 0.24
VDR-203ENST00000546653 CNMDO75829 334 aa16.56■□□□□ 0.24
VDR-203ENST00000546653 CYP2C19P33261 490 aa16.56■□□□□ 0.24
VDR-203ENST00000546653 SHROOM1Q2M3G4 852 aaPredicted RBP16.56■□□□□ 0.24
VDR-203ENST00000546653 CCAR1Q8IX12 1150 aaKnown RBP16.56■□□□□ 0.24
VDR-203ENST00000546653 ZGPATQ8N5A5 531 aaKnown RBP16.56■□□□□ 0.24
VDR-203ENST00000546653 RNPC3Q96LT9 517 aaKnown RBP16.56■□□□□ 0.24
VDR-203ENST00000546653 ABCF2Q9UG63 623 aa16.56■□□□□ 0.24
VDR-203ENST00000546653 ANP32CO43423 234 aa16.55■□□□□ 0.24
VDR-203ENST00000546653 DNAJB2P25686 324 aa16.55■□□□□ 0.24
VDR-203ENST00000546653 ADORA1P30542 326 aa16.55■□□□□ 0.24
VDR-203ENST00000546653 RASGRF1Q13972 1273 aa16.55■□□□□ 0.24
VDR-203ENST00000546653 SLF2Q8IX21 1173 aa16.55■□□□□ 0.24
VDR-203ENST00000546653 NPLOC4Q8TAT6 608 aa16.55■□□□□ 0.24
VDR-203ENST00000546653 PLXNA1Q9UIW2 1896 aa16.54■□□□□ 0.24
VDR-203ENST00000546653 MUC6Q6W4X9 2439 aa16.54■□□□□ 0.24
VDR-203ENST00000546653 C19orf81C9J6K1 198 aa16.54■□□□□ 0.24
VDR-203ENST00000546653 HOXC6P09630 235 aa16.54■□□□□ 0.24
VDR-203ENST00000546653 CYBAP13498 195 aa16.54■□□□□ 0.24
VDR-203ENST00000546653 MECOMQ03112 1051 aa16.54■□□□□ 0.24
VDR-203ENST00000546653 CCDC102BQ68D86 513 aa16.54■□□□□ 0.24
VDR-203ENST00000546653 GTF3C2Q8WUA4 911 aaPredicted RBP16.54■□□□□ 0.24
VDR-203ENST00000546653 PPM1EQ8WY54 764 aa16.54■□□□□ 0.24
VDR-203ENST00000546653 UHRF1Q96T88 793 aaPredicted RBP16.54■□□□□ 0.24
VDR-203ENST00000546653 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
VDR-203ENST00000546653 ZNF576Q9H609 170 aa16.54■□□□□ 0.24
VDR-203ENST00000546653 THEGQ9P2T0 379 aa16.54■□□□□ 0.24
VDR-203ENST00000546653 SMCHD1A6NHR9 2005 aa16.53■□□□□ 0.24
VDR-203ENST00000546653 SYNGAP1Q96PV0 1343 aa16.53■□□□□ 0.24
VDR-203ENST00000546653 CDK5RAP2Q96SN8 1893 aa16.53■□□□□ 0.24
VDR-203ENST00000546653 SLC15A5A6NIM6 579 aa16.53■□□□□ 0.24
VDR-203ENST00000546653 USP17L10C9JJH3 530 aa16.53■□□□□ 0.24
VDR-203ENST00000546653 PTPREP23469 700 aa16.53■□□□□ 0.24
VDR-203ENST00000546653 ATP2B2Q01814 1243 aa16.53■□□□□ 0.24
VDR-203ENST00000546653 C1orf53Q5VUE5 145 aa16.53■□□□□ 0.24
VDR-203ENST00000546653 MRPL50Q8N5N7 158 aaKnown RBP16.53■□□□□ 0.24
VDR-203ENST00000546653 ARRDC4Q8NCT1 418 aa16.53■□□□□ 0.24
VDR-203ENST00000546653 EMILIN3Q9NT22 766 aa16.53■□□□□ 0.24
VDR-203ENST00000546653 HERC5Q9UII4 1024 aaKnown RBP16.53■□□□□ 0.24
VDR-203ENST00000546653 TRANK1O15050 2925 aa16.52■□□□□ 0.24
VDR-203ENST00000546653 PDS5AQ29RF7 1337 aaKnown RBP16.52■□□□□ 0.24
VDR-203ENST00000546653 ZNF521Q96K83 1311 aa16.52■□□□□ 0.24
VDR-203ENST00000546653 KBTBD13C9JR72 458 aa16.52■□□□□ 0.24
VDR-203ENST00000546653 ASNSP08243 561 aa16.52■□□□□ 0.24
VDR-203ENST00000546653 TLE2Q04725 743 aa16.52■□□□□ 0.24
VDR-203ENST00000546653 GRB14Q14449 540 aa16.52■□□□□ 0.24
VDR-203ENST00000546653 ANO1Q5XXA6 986 aa16.52■□□□□ 0.24
VDR-203ENST00000546653 SIL1Q9H173 461 aa16.52■□□□□ 0.24
VDR-203ENST00000546653 DNAJC18Q9H819 358 aa16.52■□□□□ 0.24
VDR-203ENST00000546653 CEP126Q9P2H0 1117 aa16.52■□□□□ 0.24
VDR-203ENST00000546653 RABGAP1Q9Y3P9 1069 aa16.52■□□□□ 0.24
VDR-203ENST00000546653 PTPRCP08575 1304 aa16.51■□□□□ 0.23
VDR-203ENST00000546653 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.51■□□□□ 0.23
VDR-203ENST00000546653 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.51■□□□□ 0.23
VDR-203ENST00000546653 GLRX3O76003 335 aaKnown RBP16.51■□□□□ 0.23
VDR-203ENST00000546653 CIAO1O76071 339 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms