RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 TSKSQ9UJT2 592 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 PDE8AO60658 829 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 ADAMTS2O95450 1211 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 SLC39A14Q15043 492 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 GOLGA5Q8TBA6 731 aa13.66□□□□□ -0.22
NPC1L1-204ENST00000546276 FAM13AO94988 1023 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 ZNF589Q86UQ0 364 aaPredicted RBP13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 FMNL3Q8IVF7 1028 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 CLIC6Q96NY7 704 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 TLR7Q9NYK1 1049 aaKnown RBP13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 PLCG2P16885 1265 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 CFAP221Q4G0U5 840 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 RUFY4Q6ZNE9 571 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 IQCDQ96DY2 449 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 SETDB2Q96T68 719 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 DBNLQ9UJU6 430 aaKnown RBP13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 KCNJ18B7U540 433 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 RNASE9P60153 205 aaKnown RBP13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 CALCOCO2Q13137 446 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 KCNJ12Q14500 433 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 NBPF14Q5TI25 921 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 SPATA1Q5VX52 437 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 PI4K2BQ8TCG2 481 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 GDAP1L1Q96MZ0 367 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 NAP1L3Q99457 506 aaPredicted RBP13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 MED4Q9NPJ6 270 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 CARMIL3Q8ND23 1372 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 FGAP02671 866 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 DCAF17Q5H9S7 520 aaPredicted RBP13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 ZNF804AQ7Z570 1209 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 CCDC84Q86UT8 332 aaPredicted RBP13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 SPATA5Q8NB90 893 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 MTUS1Q9ULD2 1270 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 PCDHA5Q9Y5H7 936 aa13.65□□□□□ -0.22
NPC1L1-204ENST00000546276 CDK12Q9NYV4 1490 aaPredicted RBP13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 RESTQ13127 1097 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 SMARCC2Q8TAQ2 1214 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 RSRC1Q96IZ7 334 aaKnown RBP13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 PSMB7Q99436 277 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 IFIH1Q9BYX4 1025 aaKnown RBP13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 HOMER2Q9NSB8 354 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 SWAP70Q9UH65 585 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 HMGB2P26583 209 aaKnown RBP13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 ASIC2Q16515 512 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 CCDC25Q86WR0 208 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 ZNF654Q8IZM8 581 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 FAM71BQ8TC56 605 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 NAP1L4Q99733 375 aaKnown RBP13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 HAUS4Q9H6D7 363 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 CDC23Q9UJX2 597 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 ZDHHC9Q9Y397 364 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 SH3TC1Q8TE82 1336 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 LDHBP07195 334 aaKnown RBP13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 ACTN2P35609 894 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 MORC3Q14149 939 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 NECTIN1Q15223 517 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 SRGAP1Q7Z6B7 1085 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 KIF2CQ99661 725 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 SPDYE3A6NKU9 549 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 CCNT1O60563 726 aaKnown RBP13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 POLA2Q14181 598 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 PLCD3Q8N3E9 789 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 ANKRD2Q9GZV1 360 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 C19orf44Q9H6X5 657 aa13.64□□□□□ -0.23
NPC1L1-204ENST00000546276 PREX2Q70Z35 1606 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 ATP2A1O14983 1001 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 PPP6R2O75170 966 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 PICALMQ13492 652 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 FTOQ9C0B1 505 aaKnown RBP eCLIP13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 PDE11AQ9HCR9 933 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 KCNK9Q9NPC2 374 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 A0A087WWV3 80 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 VGLL3A8MV65 326 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 BTBD18B2RXH4 712 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 SEC31AO94979 1220 aaKnown RBP13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 PPP1R7Q15435 360 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 ZMYM1Q5SVZ6 1142 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 LINC00301Q8NCQ3 95 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 TRIM58Q8NG06 486 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 hCG_1642624A0A1W2PR95 340 aa13.63□□□□□ -0.23
NPC1L1-204ENST00000546276 VIMP08670 466 aaKnown RBP13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 RGS22Q8NE09 1264 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 BICD1Q96G01 975 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 EPB41P11171 864 aaKnown RBP13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 TXKP42681 527 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 NCBP1Q09161 790 aaKnown RBP13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 NONOQ15233 471 aaKnown RBP eCLIP13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 SEL1L2Q5TEA6 688 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 KRT25Q7Z3Z0 450 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 IQCGQ9H095 443 aaKnown RBP13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 UTP11Q9Y3A2 253 aaKnown RBP13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 SHROOM2Q13796 1616 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 CETN3O15182 167 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 ACTN4O43707 911 aaKnown RBP13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 NEBLO76041 1014 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 SETDB1Q15047 1291 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 TYW1BQ6NUM6 668 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 SARM1Q6SZW1 724 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 GSTA5Q7RTV2 222 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms