RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 ABCB6Q9NP58 842 aa8.94□□□□□ -0.98
UBR1-202ENST00000546274 BIN2Q9UBW5 565 aaPredicted RBP8.94□□□□□ -0.98
UBR1-202ENST00000546274 PCDHA7Q9UN72 937 aa8.94□□□□□ -0.98
UBR1-202ENST00000546274 COL14A1Q05707 1796 aaKnown RBP8.94□□□□□ -0.98
UBR1-202ENST00000546274 A0A1B0GUA9 196 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 TXLNAP40222 546 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 IL15P40933 162 aaPredicted RBP8.93□□□□□ -0.98
UBR1-202ENST00000546274 CABP4P57796 275 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 CRYMQ14894 314 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 CHRNA2Q15822 529 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 AOPEPQ8N6M6 819 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 AFAP1L1Q8TED9 768 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 RABGGTAQ92696 567 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 PSMD1Q99460 953 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 UTP14AQ9BVJ6 771 aaKnown RBP8.93□□□□□ -0.98
UBR1-202ENST00000546274 EYA2O00167 538 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 RHOXF2BP0C7M4 288 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 BEND6Q5SZJ8 279 aaPredicted RBP8.93□□□□□ -0.98
UBR1-202ENST00000546274 TRIM65Q6PJ69 517 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 BAG1Q99933 345 aaPredicted RBP8.93□□□□□ -0.98
UBR1-202ENST00000546274 RHOXF2Q9BQY4 288 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 EHD4Q9H223 541 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 CWC25Q9NXE8 425 aaPredicted RBP8.93□□□□□ -0.98
UBR1-202ENST00000546274 HPS5Q9UPZ3 1129 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 ANKRD33BA6NCL7 494 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 KINO60870 393 aaKnown RBP8.93□□□□□ -0.98
UBR1-202ENST00000546274 RNF40O75150 1001 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 CIAO1O76071 339 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 SSBP05455 408 aaKnown RBP eCLIP8.93□□□□□ -0.98
UBR1-202ENST00000546274 GOLGA8FQ08AF8 430 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 GOLGA8DPQ0D2H9 430 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 E2F5Q15329 346 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 POTEDQ86YR6 584 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.93□□□□□ -0.98
UBR1-202ENST00000546274 WDR24Q96S15 920 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 TACO1Q9BSH4 297 aaKnown RBP8.93□□□□□ -0.98
UBR1-202ENST00000546274 PICK1Q9NRD5 415 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 RTEL1Q9NZ71 1219 aa8.93□□□□□ -0.98
UBR1-202ENST00000546274 IFIT1P09914 478 aaKnown RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 BRD3Q15059 726 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 RBBP5Q15291 538 aaKnown RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 PTPN21Q16825 1174 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 FSIP1Q8NA03 581 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 FAM71BQ8TC56 605 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 MICAL1Q8TDZ2 1067 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 SMARCC1Q92922 1105 aaPredicted RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 ZNF396Q96N95 335 aaPredicted RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 FAM210AQ96ND0 272 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 MYH3P11055 1940 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 CHD4Q14839 1912 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 NUTM2BA6NNL0 878 aaPredicted RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 NUTM2EB1AL46 878 aaPredicted RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 A1BGP04217 495 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 ME1P48163 572 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 NDUFA8P51970 172 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 RWDD2BP57060 319 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 GRIK3Q13003 919 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 CASP8Q14790 479 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 ADALQ6DHV7 355 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 OTUD7BQ6GQQ9 843 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 CCDC73Q6ZRK6 1079 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 NUTM2AQ8IVF1 878 aaPredicted RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 LINC00301Q8NCQ3 95 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 BCAS4Q8TDM0 211 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 SPDL1Q96EA4 605 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 PRDM16Q9HAZ2 1276 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 IFNKQ9P0W0 207 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 CLIC4Q9Y696 253 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 PLCH1Q4KWH8 1693 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 TNS2Q63HR2 1409 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 PPP1R12BO60237 982 aaPredicted RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 ERLIN1O75477 346 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 CSB-PGBD3P0DP91 1061 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 ANTXR2P58335 489 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 SCARF1Q14162 830 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 PREPLQ4J6C6 727 aaPredicted RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 NFXL1Q6ZNB6 911 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 RSRC2Q7L4I2 434 aaKnown RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 TRIM74Q86UV6 250 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 TRIM73Q86UV7 250 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 MB21D2Q8IYB1 491 aaPredicted RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 NKX2-3Q8TAU0 364 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 RIN2Q8WYP3 895 aaPredicted RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 DHX58Q96C10 678 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 XPO4Q9C0E2 1151 aaKnown RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 A1CFQ9NQ94 594 aaKnown RBP8.92□□□□□ -0.98
UBR1-202ENST00000546274 KCND1Q9NSA2 647 aa8.92□□□□□ -0.98
UBR1-202ENST00000546274 CPDO75976 1380 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 A0A1B0GVL5 298 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 A0A1W2PQ27 194 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 A0A1W2PQ64 194 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 A0A1W2PQD8 194 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 KIF28PB7ZC32 967 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 WDHD1O75717 1129 aaPredicted RBP8.91□□□□□ -0.98
UBR1-202ENST00000546274 ADORA1P30542 326 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 GBP2P32456 591 aaPredicted RBP8.91□□□□□ -0.98
UBR1-202ENST00000546274 MRPS27Q92552 414 aaKnown RBP8.91□□□□□ -0.98
UBR1-202ENST00000546274 PNKPQ96T60 521 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 ZBTB3Q9H5J0 574 aa8.91□□□□□ -0.98
UBR1-202ENST00000546274 GJB4Q9NTQ9 266 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms