RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 FLOT1O75955 427 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 PAFAH1B1P43034 410 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 MKRN3Q13064 507 aaKnown RBP10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 PTPN14Q15678 1187 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 PABPN1LA6NDY0 278 aaKnown RBP10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 NONOQ15233 471 aaKnown RBP eCLIP10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 GNPTABQ3T906 1256 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 TTC38Q5R3I4 469 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 TAOK3Q9H2K8 898 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 C1orf167Q5SNV9 1468 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 GCOM1H8Y6P7 765 aaPredicted RBP10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 POLR2MP0CAP2 368 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 PDE6AP16499 860 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 ARID4AP29374 1257 aaPredicted RBP10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 ZNF165P49910 485 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 WDR44Q5JSH3 913 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 PHKBQ93100 1093 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 MED23Q9ULK4 1368 aa10.18□□□□□ -0.78
MTHFD1-202ENST00000545908 TBC1D9BQ66K14 1250 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 EDC3Q96F86 508 aaKnown RBP10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 RNF123Q5XPI4 1314 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 IREB2P48200 963 aaKnown RBP10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 ZSCAN23Q3MJ62 389 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 USP25Q9UHP3 1055 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 ANKRD35Q8N283 1001 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 IQUBQ8NA54 791 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 ELP1O95163 1332 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 USP14P54578 494 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 PPP2R5BQ15173 497 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 OTUD6AQ7L8S5 288 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 CCDC91Q7Z6B0 441 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 AOPEPQ8N6M6 819 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 NEK11Q8NG66 645 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 GPR101Q96P66 508 aaPredicted RBP10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 PTCH1Q13635 1447 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 SGSM2O43147 1006 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 RPL13P26373 211 aaKnown RBP10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 GJC1P36383 396 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 ARID5AQ03989 594 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 NRKQ7Z2Y5 1582 aa10.17□□□□□ -0.78
MTHFD1-202ENST00000545908 VPS72Q15906 364 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 METTL13Q8N6R0 699 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 CCPG1Q9ULG6 757 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 TRPC6Q9Y210 931 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 AGLP35573 1532 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 C8orf34Q49A92 452 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 CC2D2BQ6DHV5 1058 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 CCDC113Q9H0I3 377 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 hCG_1642624A0A1W2PR95 340 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 KIF2AO00139 706 aaPredicted RBP10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 ADCY5O95622 1261 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 EZRP15311 586 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 MRPS9P82933 396 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 UBXN1Q04323 297 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 BIRC3Q13489 604 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 TRPC3Q13507 836 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 FBXO11Q86XK2 927 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 CCDC117Q8IWD4 279 aaPredicted RBP10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 TRMT1Q9NXH9 659 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 SMCO2A6NFE2 343 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 RILPL1Q5EBL4 403 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 DPP9Q86TI2 863 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 SSH3Q8TE77 659 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 EEF2P13639 858 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 SPAG1Q07617 926 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 CNNM4Q6P4Q7 775 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 MIER3Q7Z3K6 550 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 PSMD1Q99460 953 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 DNM3Q9UQ16 869 aa10.16□□□□□ -0.78
MTHFD1-202ENST00000545908 M0R2C6 588 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 NEMFO60524 1076 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 MCM3P25205 808 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 CCNA1P78396 465 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 SMC1AQ14683 1233 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 GLG1Q92896 1179 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 DACT1Q9NYF0 836 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 AXIN2Q9Y2T1 843 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 PSDA5PKW4 1024 aaPredicted RBP10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 CYLC1P35663 651 aaPredicted RBP10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 UTP14CQ5TAP6 766 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 ATL3Q6DD88 541 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 HACE1Q8IYU2 909 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 SNX29Q8TEQ0 813 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 NARFQ9UHQ1 456 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 URI1O94763 535 aaPredicted RBP10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 ACTN2P35609 894 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 STX17P56962 302 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 AOC3Q16853 763 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 ZNF654Q8IZM8 581 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 MYCT1Q8N699 235 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 HLFQ16534 295 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 NAA15Q9BXJ9 866 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 COA1Q9GZY4 146 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 PSTPIP2Q9H939 334 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 VPS54Q9P1Q0 977 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 SSX2IPQ9Y2D8 614 aa10.15□□□□□ -0.78
MTHFD1-202ENST00000545908 GAS7O60861 476 aa10.15□□□□□ -0.79
MTHFD1-202ENST00000545908 CAVIN2O95810 425 aa10.15□□□□□ -0.79
MTHFD1-202ENST00000545908 DYNLL1P63167 89 aaKnown RBP10.15□□□□□ -0.79
MTHFD1-202ENST00000545908 IFFO1Q0D2I5 559 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms