RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 XBP1P17861 261 aa17.91■□□□□ 0.46
SCAP-215ENST00000545718 FAM47AQ5JRC9 791 aa17.91■□□□□ 0.46
SCAP-215ENST00000545718 E4F1Q66K89 784 aaPredicted RBP17.91■□□□□ 0.46
SCAP-215ENST00000545718 DHX58Q96C10 678 aa17.91■□□□□ 0.46
SCAP-215ENST00000545718 CSRNP2Q9H175 543 aa17.91■□□□□ 0.46
SCAP-215ENST00000545718 MTMR7Q9Y216 660 aa17.91■□□□□ 0.46
SCAP-215ENST00000545718 NMT2O60551 498 aa17.91■□□□□ 0.46
SCAP-215ENST00000545718 BMP6P22004 513 aa17.91■□□□□ 0.46
SCAP-215ENST00000545718 PTPREP23469 700 aa17.91■□□□□ 0.46
SCAP-215ENST00000545718 AFMP43652 599 aa17.91■□□□□ 0.46
SCAP-215ENST00000545718 LINC00116Q8NCU8 138 aa17.91■□□□□ 0.46
SCAP-215ENST00000545718 SMARCE1Q969G3 411 aa17.91■□□□□ 0.46
SCAP-215ENST00000545718 FAM84BQ96KN1 310 aaPredicted RBP17.91■□□□□ 0.46
SCAP-215ENST00000545718 ZMYND15Q9H091 742 aa17.91■□□□□ 0.46
SCAP-215ENST00000545718 ZNF215Q9UL58 517 aaPredicted RBP17.91■□□□□ 0.46
SCAP-215ENST00000545718 TOP1P11387 765 aaKnown RBP17.9■□□□□ 0.46
SCAP-215ENST00000545718 KLHL10Q6JEL2 608 aa17.9■□□□□ 0.46
SCAP-215ENST00000545718 NYAP1Q6ZVC0 841 aa17.9■□□□□ 0.46
SCAP-215ENST00000545718 RIOK1Q9BRS2 568 aaKnown RBP17.9■□□□□ 0.46
SCAP-215ENST00000545718 SRP68Q9UHB9 627 aaKnown RBP17.9■□□□□ 0.46
SCAP-215ENST00000545718 TBC1D9BQ66K14 1250 aa17.9■□□□□ 0.46
SCAP-215ENST00000545718 SYT10Q6XYQ8 523 aa17.9■□□□□ 0.46
SCAP-215ENST00000545718 FAM177A1Q8N128 213 aaPredicted RBP17.9■□□□□ 0.46
SCAP-215ENST00000545718 MAN1B1Q9UKM7 699 aa17.9■□□□□ 0.46
SCAP-215ENST00000545718 MYH14Q7Z406 1995 aaKnown RBP17.9■□□□□ 0.46
SCAP-215ENST00000545718 CASP1P29466 404 aa17.89■□□□□ 0.45
SCAP-215ENST00000545718 UBE4AQ14139 1066 aa17.89■□□□□ 0.45
SCAP-215ENST00000545718 EARS2Q5JPH6 523 aaKnown RBP17.89■□□□□ 0.45
SCAP-215ENST00000545718 TRIM75PA6NK02 468 aa17.89■□□□□ 0.45
SCAP-215ENST00000545718 CBFA2T2O43439 604 aa17.89■□□□□ 0.45
SCAP-215ENST00000545718 SEC23AQ15436 765 aa17.89■□□□□ 0.45
SCAP-215ENST00000545718 PPP1R13BQ96KQ4 1090 aa17.89■□□□□ 0.45
SCAP-215ENST00000545718 BSDC1Q9NW68 430 aaPredicted RBP17.89■□□□□ 0.45
SCAP-215ENST00000545718 CEP131Q9UPN4 1083 aa17.89■□□□□ 0.45
SCAP-215ENST00000545718 NFE2L3Q9Y4A8 694 aa17.89■□□□□ 0.45
SCAP-215ENST00000545718 RTL9Q8NET4 1388 aa17.89■□□□□ 0.45
SCAP-215ENST00000545718 ZNF174Q15697 407 aa17.88■□□□□ 0.45
SCAP-215ENST00000545718 NOM1Q5C9Z4 860 aaKnown RBP17.88■□□□□ 0.45
SCAP-215ENST00000545718 PTF1AQ7RTS3 328 aa17.88■□□□□ 0.45
SCAP-215ENST00000545718 SMARCC1Q92922 1105 aaPredicted RBP17.88■□□□□ 0.45
SCAP-215ENST00000545718 EPSTI1Q96J88 318 aa17.88■□□□□ 0.45
SCAP-215ENST00000545718 COL4A1P02462 1669 aa17.88■□□□□ 0.45
SCAP-215ENST00000545718 PRDX5P30044 214 aa17.88■□□□□ 0.45
SCAP-215ENST00000545718 NBPF5PQ86XG9 351 aaPredicted RBP17.88■□□□□ 0.45
SCAP-215ENST00000545718 ANKRD7Q92527 254 aa17.88■□□□□ 0.45
SCAP-215ENST00000545718 STAMQ92783 540 aa17.88■□□□□ 0.45
SCAP-215ENST00000545718 RNF26Q9BY78 433 aaPredicted RBP17.88■□□□□ 0.45
SCAP-215ENST00000545718 TAF1P21675 1872 aa17.88■□□□□ 0.45
SCAP-215ENST00000545718 CYP2D6P10635 497 aa17.88■□□□□ 0.45
SCAP-215ENST00000545718 KRT2P35908 639 aa17.88■□□□□ 0.45
SCAP-215ENST00000545718 FAM182BQ5T319 152 aa17.88■□□□□ 0.45
SCAP-215ENST00000545718 ZNF384Q8TF68 577 aa17.88■□□□□ 0.45
SCAP-215ENST00000545718 THRAP3Q9Y2W1 955 aaKnown RBP17.88■□□□□ 0.45
SCAP-215ENST00000545718 DDX60Q8IY21 1712 aaKnown RBP17.88■□□□□ 0.45
SCAP-215ENST00000545718 GOLGB1Q14789 3259 aaKnown RBP17.87■□□□□ 0.45
SCAP-215ENST00000545718 LRP5O75197 1615 aa17.87■□□□□ 0.45
SCAP-215ENST00000545718 MECOMQ03112 1051 aa17.87■□□□□ 0.45
SCAP-215ENST00000545718 FMR1Q06787 632 aaKnown RBP eCLIP17.87■□□□□ 0.45
SCAP-215ENST00000545718 CTR9Q6PD62 1173 aa17.87■□□□□ 0.45
SCAP-215ENST00000545718 SHISA4Q96DD7 197 aa17.87■□□□□ 0.45
SCAP-215ENST00000545718 ZNF804BA4D1E1 1349 aa17.87■□□□□ 0.45
SCAP-215ENST00000545718 CHD4Q14839 1912 aa17.87■□□□□ 0.45
SCAP-215ENST00000545718 COL1A1P02452 1464 aaPredicted RBP17.87■□□□□ 0.45
SCAP-215ENST00000545718 FAM237AA0A1B0GTK4 181 aa17.87■□□□□ 0.45
SCAP-215ENST00000545718 STX17P56962 302 aa17.87■□□□□ 0.45
SCAP-215ENST00000545718 RPS8P62241 208 aaKnown RBP17.87■□□□□ 0.45
SCAP-215ENST00000545718 RGS22Q8NE09 1264 aa17.86■□□□□ 0.45
SCAP-215ENST00000545718 NLRP3Q96P20 1036 aa17.86■□□□□ 0.45
SCAP-215ENST00000545718 SRPRBQ9Y5M8 271 aaKnown RBP17.86■□□□□ 0.45
SCAP-215ENST00000545718 CTCFLQ8NI51 663 aaPredicted RBP17.86■□□□□ 0.45
SCAP-215ENST00000545718 SETDB2Q96T68 719 aa17.86■□□□□ 0.45
SCAP-215ENST00000545718 TMX1Q9H3N1 280 aa17.86■□□□□ 0.45
SCAP-215ENST00000545718 BRMS1Q9HCU9 246 aa17.86■□□□□ 0.45
SCAP-215ENST00000545718 WNT7AO00755 349 aa17.85■□□□□ 0.45
SCAP-215ENST00000545718 MDM2Q00987 491 aaPredicted RBP17.85■□□□□ 0.45
SCAP-215ENST00000545718 PKN1Q16512 942 aa17.85■□□□□ 0.45
SCAP-215ENST00000545718 CLEC4GQ6UXB4 293 aa17.85■□□□□ 0.45
SCAP-215ENST00000545718 VWA3AA6NCI4 1184 aa17.85■□□□□ 0.45
SCAP-215ENST00000545718 TSPY2A6NKD2 308 aa17.85■□□□□ 0.45
SCAP-215ENST00000545718 HIBADHP31937 336 aaKnown RBP17.85■□□□□ 0.45
SCAP-215ENST00000545718 SF3B3Q15393 1217 aaKnown RBP17.85■□□□□ 0.45
SCAP-215ENST00000545718 CREBRFQ8IUR6 639 aa17.85■□□□□ 0.45
SCAP-215ENST00000545718 SAMSN1Q9NSI8 373 aaKnown RBP17.85■□□□□ 0.45
SCAP-215ENST00000545718 MYH2Q9UKX2 1941 aa17.85■□□□□ 0.45
SCAP-215ENST00000545718 SPATA31A5Q5VU36 1347 aa17.85■□□□□ 0.45
SCAP-215ENST00000545718 SPATA31A7Q8IWB4 1347 aa17.85■□□□□ 0.45
SCAP-215ENST00000545718 ROBO1Q9Y6N7 1651 aa17.85■□□□□ 0.45
SCAP-215ENST00000545718 NSUN4Q96CB9 384 aaKnown RBP17.85■□□□□ 0.45
SCAP-215ENST00000545718 DNAI1Q9UI46 699 aa17.85■□□□□ 0.45
SCAP-215ENST00000545718 ANAPC4Q9UJX5 808 aa17.85■□□□□ 0.45
SCAP-215ENST00000545718 BAZ2AQ9UIF9 1905 aaKnown RBP17.84■□□□□ 0.45
SCAP-215ENST00000545718 GNPATO15228 680 aa17.84■□□□□ 0.45
SCAP-215ENST00000545718 ELF2Q15723 593 aa17.84■□□□□ 0.45
SCAP-215ENST00000545718 VSTM4Q8IW00 320 aa17.84■□□□□ 0.45
SCAP-215ENST00000545718 SMYD4Q8IYR2 804 aaPredicted RBP17.84■□□□□ 0.45
SCAP-215ENST00000545718 CRNKL1Q9BZJ0 848 aaKnown RBP17.84■□□□□ 0.45
SCAP-215ENST00000545718 COBLO75128 1261 aa17.84■□□□□ 0.45
SCAP-215ENST00000545718 ZPR1O75312 459 aa17.84■□□□□ 0.45
SCAP-215ENST00000545718 ADKP55263 362 aaKnown RBP17.84■□□□□ 0.45
SCAP-215ENST00000545718 NLRP5P59047 1200 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms