RNA–Protein interactions for RNA: ENST00000544862.5

TNFSF11-205, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-205ENST00000544862 MBIPQ9NS73 344 aa8.6□□□□□ -1.03
TNFSF11-205ENST00000544862 NSFL1CQ9UNZ2 370 aaKnown RBP8.6□□□□□ -1.03
TNFSF11-205ENST00000544862 USP3Q9Y6I4 520 aa8.6□□□□□ -1.03
TNFSF11-205ENST00000544862 COL2A1P02458 1487 aaPredicted RBP8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 SERTM1A2A2V5 107 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 CARNS1A5YM72 827 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 SFI1A8K8P3 1242 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 ADM5C9JUS6 153 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 NHLH1Q02575 133 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 KCNA1Q09470 495 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 MAP3K11Q16584 847 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 RNFT1Q5M7Z0 435 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 NBPF11Q86T75 865 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 L3MBTL2Q969R5 705 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 EPHX3Q9H6B9 360 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 RUBCNLQ9H714 662 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 EFCC1Q9HA90 598 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 PTCH2Q9Y6C5 1203 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 SNED1Q8TER0 1413 aa8.59□□□□□ -1.03
TNFSF11-205ENST00000544862 ATG7O95352 703 aa8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 DPYDQ12882 1025 aa8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 COL9A2Q14055 689 aaPredicted RBP8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 UBAP2LQ14157 1087 aaKnown RBP8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 ELOAQ14241 798 aaKnown RBP8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 GAS6Q14393 721 aa8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 TMEM31Q5JXX7 168 aa8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 KRT26Q7Z3Y9 468 aa8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 TSEN2Q8NCE0 465 aaKnown RBP8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 ERO1AQ96HE7 468 aa8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 TRANK1O15050 2925 aa8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 LAMB2P55268 1798 aa8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 USP34Q70CQ2 3546 aa8.58□□□□□ -1.04
TNFSF11-205ENST00000544862 ZSWIM8A7E2V4 1837 aa8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 SHTN1A0MZ66 631 aa8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 EML1O00423 815 aa8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 THBS1P07996 1170 aa8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 GMPSP49915 693 aaPredicted RBP8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 C1orf53Q5VUE5 145 aa8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 PRR5LQ6MZQ0 368 aa8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 RTKN2Q8IZC4 609 aa8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 SH3TC2Q8TF17 1288 aa8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 ZDHHC1Q8WTX9 485 aa8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 MASTLQ96GX5 879 aa8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 NECAB3Q96P71 396 aaPredicted RBP8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 TSPAN10Q9H1Z9 355 aaPredicted RBP8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 C11orf16Q9NQ32 467 aa8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 ATXN7L1Q9ULK2 861 aaPredicted RBP8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 WDFY4Q6ZS81 3184 aa8.57□□□□□ -1.04
TNFSF11-205ENST00000544862 SSC5DA1L4H1 1573 aa8.56□□□□□ -1.04
TNFSF11-205ENST00000544862 ITGAEP38570 1179 aa8.56□□□□□ -1.04
TNFSF11-205ENST00000544862 ARSJQ5FYB0 599 aaPredicted RBP8.56□□□□□ -1.04
TNFSF11-205ENST00000544862 INTS5Q6P9B9 1019 aaKnown RBP8.56□□□□□ -1.04
TNFSF11-205ENST00000544862 NME9Q86XW9 330 aa8.56□□□□□ -1.04
TNFSF11-205ENST00000544862 FAM200AQ8TCP9 573 aa8.56□□□□□ -1.04
TNFSF11-205ENST00000544862 NARFQ9UHQ1 456 aa8.56□□□□□ -1.04
TNFSF11-205ENST00000544862 ZNF232Q9UNY5 417 aa8.56□□□□□ -1.04
TNFSF11-205ENST00000544862 PCDHGC4Q9Y5F7 938 aa8.56□□□□□ -1.04
TNFSF11-205ENST00000544862 KIF7Q2M1P5 1343 aa8.55□□□□□ -1.04
TNFSF11-205ENST00000544862 A0A1W2PNR3 127 aa8.55□□□□□ -1.04
TNFSF11-205ENST00000544862 FOSL2P15408 326 aa8.55□□□□□ -1.04
TNFSF11-205ENST00000544862 MX2P20592 715 aa8.55□□□□□ -1.04
TNFSF11-205ENST00000544862 MAGEA10P43363 369 aaPredicted RBP8.55□□□□□ -1.04
TNFSF11-205ENST00000544862 MFAP1P55081 439 aaKnown RBP8.55□□□□□ -1.04
TNFSF11-205ENST00000544862 SAMD5Q5TGI4 173 aa8.55□□□□□ -1.04
TNFSF11-205ENST00000544862 RGS22Q8NE09 1264 aa8.55□□□□□ -1.04
TNFSF11-205ENST00000544862 ASB2Q96Q27 587 aa8.55□□□□□ -1.04
TNFSF11-205ENST00000544862 NDFIP2Q9NV92 336 aa8.55□□□□□ -1.04
TNFSF11-205ENST00000544862 ZMYND8Q9ULU4 1186 aaPredicted RBP8.55□□□□□ -1.04
TNFSF11-205ENST00000544862 C5orf42Q9H799 3197 aa8.54□□□□□ -1.04
TNFSF11-205ENST00000544862 PPP1R12BO60237 982 aaPredicted RBP8.54□□□□□ -1.04
TNFSF11-205ENST00000544862 IGFBP4P22692 258 aa8.54□□□□□ -1.04
TNFSF11-205ENST00000544862 HOXC9P31274 260 aa8.54□□□□□ -1.04
TNFSF11-205ENST00000544862 MAP2K3P46734 347 aa8.54□□□□□ -1.04
TNFSF11-205ENST00000544862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.54□□□□□ -1.04
TNFSF11-205ENST00000544862 HINFPQ9BQA5 517 aa8.54□□□□□ -1.04
TNFSF11-205ENST00000544862 ZCCHC2Q9C0B9 1178 aaKnown RBP8.54□□□□□ -1.04
TNFSF11-205ENST00000544862 CFAP47Q6ZTR5 3102 aa8.54□□□□□ -1.04
TNFSF11-205ENST00000544862 SOS1Q07889 1333 aaPredicted RBP8.54□□□□□ -1.04
TNFSF11-205ENST00000544862 FASNP49327 2511 aaKnown RBP8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 LAMB1P07942 1786 aa8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 NPC1L1Q9UHC9 1359 aa8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 FAM86C2PA6NEL3 165 aa8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 FARP2O94887 1054 aaPredicted RBP8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 TXLNAP40222 546 aa8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 HIF1AQ16665 826 aa8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 SWI5Q1ZZU3 235 aa8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 TBCELQ5QJ74 424 aa8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 MOB2Q70IA6 237 aa8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 PSMD1Q99460 953 aa8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 C2orf49Q9BVC5 232 aaPredicted RBP8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 UBE2OQ9C0C9 1292 aaKnown RBP8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 SEMA6BQ9H3T3 888 aa8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 NOVA2Q9UNW9 492 aaKnown RBP8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 MTMR7Q9Y216 660 aa8.53□□□□□ -1.04
TNFSF11-205ENST00000544862 KTN1Q86UP2 1357 aaKnown RBP8.52□□□□□ -1.05
TNFSF11-205ENST00000544862 ATXN7O15265 892 aaPredicted RBP8.52□□□□□ -1.05
TNFSF11-205ENST00000544862 BNIP3LO60238 219 aa8.52□□□□□ -1.05
TNFSF11-205ENST00000544862 FAM157BP0CG42 384 aa8.52□□□□□ -1.05
TNFSF11-205ENST00000544862 GJA8P48165 433 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms