RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 GPIHBP1Q8IV16 184 aa11.25□□□□□ -0.61
SP140-214ENST00000544128 DYNLL2Q96FJ2 89 aa11.25□□□□□ -0.61
SP140-214ENST00000544128 DDX27Q96GQ7 796 aaKnown RBP11.25□□□□□ -0.61
SP140-214ENST00000544128 TMEM39BQ9GZU3 492 aa11.25□□□□□ -0.61
SP140-214ENST00000544128 DHX36Q9H2U1 1008 aaKnown RBP11.25□□□□□ -0.61
SP140-214ENST00000544128 INCENPQ9NQS7 918 aa11.25□□□□□ -0.61
SP140-214ENST00000544128 GGA3Q9NZ52 723 aa11.25□□□□□ -0.61
SP140-214ENST00000544128 ANAPC4Q9UJX5 808 aa11.25□□□□□ -0.61
SP140-214ENST00000544128 TACC3Q9Y6A5 838 aa11.25□□□□□ -0.61
SP140-214ENST00000544128 DDX60LQ5H9U9 1706 aaKnown RBP11.25□□□□□ -0.61
SP140-214ENST00000544128 PASKQ96RG2 1323 aa11.25□□□□□ -0.61
SP140-214ENST00000544128 LAMB1P07942 1786 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 LAMA4Q16363 1823 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 TMEM88BA6NKF7 163 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 HLA-DOAP06340 250 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 SLC3A2P08195 630 aaKnown RBP11.24□□□□□ -0.61
SP140-214ENST00000544128 MAP2K1Q02750 393 aaPredicted RBP11.24□□□□□ -0.61
SP140-214ENST00000544128 TNFAIP1Q13829 316 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 KRT32Q14532 448 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 RASA3Q14644 834 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 ADCK5Q3MIX3 580 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 TSGA10IPQ3SY00 556 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 AKNAD1Q5T1N1 836 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 MFSD6Q6ZSS7 791 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 STOX1Q6ZVD7 989 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 FAM83AQ86UY5 434 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 APOBEC3FQ8IUX4 373 aaKnown RBP11.24□□□□□ -0.61
SP140-214ENST00000544128 DCPSQ96C86 337 aaKnown RBP11.24□□□□□ -0.61
SP140-214ENST00000544128 JAKMIP1Q96N16 626 aaKnown RBP11.24□□□□□ -0.61
SP140-214ENST00000544128 KIF2CQ99661 725 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 TOMM22Q9NS69 142 aa11.24□□□□□ -0.61
SP140-214ENST00000544128 CASP8AP2Q9UKL3 1982 aa11.23□□□□□ -0.61
SP140-214ENST00000544128 PSMA5P28066 241 aa11.23□□□□□ -0.61
SP140-214ENST00000544128 TRDNQ13061 729 aa11.23□□□□□ -0.61
SP140-214ENST00000544128 RRP12Q5JTH9 1297 aaKnown RBP11.23□□□□□ -0.61
SP140-214ENST00000544128 PNMA8AQ86V59 439 aaPredicted RBP11.23□□□□□ -0.61
SP140-214ENST00000544128 IL27Q8NEV9 243 aa11.23□□□□□ -0.61
SP140-214ENST00000544128 STAG1Q8WVM7 1258 aa11.23□□□□□ -0.61
SP140-214ENST00000544128 NEK1Q96PY6 1258 aa11.23□□□□□ -0.61
SP140-214ENST00000544128 CSRNP1Q96S65 589 aa11.23□□□□□ -0.61
SP140-214ENST00000544128 DEFB129Q9H1M3 183 aa11.23□□□□□ -0.61
SP140-214ENST00000544128 RNF41Q9H4P4 317 aaPredicted RBP11.23□□□□□ -0.61
SP140-214ENST00000544128 PI4KBQ9UBF8 816 aa11.23□□□□□ -0.61
SP140-214ENST00000544128 PRDM1O75626 825 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 COL2A1P02458 1487 aaPredicted RBP11.22□□□□□ -0.61
SP140-214ENST00000544128 SLURP2P0DP57 97 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 CPA1P15085 419 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
SP140-214ENST00000544128 POLR2AP24928 1970 aaKnown RBP11.22□□□□□ -0.61
SP140-214ENST00000544128 NEDD4P46934 1319 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 CDK8P49336 464 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 FXR2P51116 673 aaKnown RBP eCLIP11.22□□□□□ -0.61
SP140-214ENST00000544128 PDE4BQ07343 736 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 DEFB115Q30KQ5 88 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 ATRNL1Q5VV63 1379 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 C16orf86Q6ZW13 317 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 RALYLQ86SE5 291 aaKnown RBP11.22□□□□□ -0.61
SP140-214ENST00000544128 IFNL1Q8IU54 200 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 CRACR2BQ8N4Y2 399 aaPredicted RBP11.22□□□□□ -0.61
SP140-214ENST00000544128 SLC44A5Q8NCS7 719 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 NCOA7Q8NI08 942 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 IL17RAQ96F46 866 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 ROBO3Q96MS0 1386 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 TRIM34Q9BYJ4 488 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 PITPNM2Q9BZ72 1349 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 UPF3BQ9BZI7 483 aaKnown RBP11.22□□□□□ -0.61
SP140-214ENST00000544128 CRISPLD2Q9H0B8 497 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 KDM4CQ9H3R0 1056 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 CNNM2Q9H8M5 875 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 PGAP2Q9UHJ9 254 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 SERPINB13Q9UIV8 391 aa11.22□□□□□ -0.61
SP140-214ENST00000544128 WDR33Q9C0J8 1336 aaKnown RBP11.21□□□□□ -0.61
SP140-214ENST00000544128 FAM196BA6NMK8 535 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 B4E1Z4 1266 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 ITGBL1O95965 494 aaPredicted RBP11.21□□□□□ -0.61
SP140-214ENST00000544128 NEK4P51957 841 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 GABPAQ06546 454 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 CAMK2BQ13554 666 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 COL9A3Q14050 684 aaPredicted RBP11.21□□□□□ -0.61
SP140-214ENST00000544128 RABEP1Q15276 862 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 NBPF12Q5TAG4 269 aaPredicted RBP11.21□□□□□ -0.61
SP140-214ENST00000544128 PRAMEF18Q5VWM3 479 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 BLOC1S2Q6QNY1 142 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 USP48Q86UV5 1035 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 FOXP4Q8IVH2 680 aaPredicted RBP11.21□□□□□ -0.61
SP140-214ENST00000544128 SULF1Q8IWU6 871 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 NKX2-3Q8TAU0 364 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 TEPSINQ96N21 525 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 TM6SF1Q9BZW5 370 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 KRT23Q9C075 422 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 MCOLN1Q9GZU1 580 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 EHD4Q9H223 541 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 ZSWIM6Q9HCJ5 1215 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.21□□□□□ -0.61
SP140-214ENST00000544128 CYP46A1Q9Y6A2 500 aa11.21□□□□□ -0.61
SP140-214ENST00000544128 SIPA1L1O43166 1804 aa11.21□□□□□ -0.62
SP140-214ENST00000544128 RASSF10A6NK89 507 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 ADM5C9JUS6 153 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms