RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 TFAP4Q01664 338 aa23.11■■□□□ 1.29
COPS7A-218ENST00000543939 GUCY1B3Q02153 619 aa23.11■■□□□ 1.29
COPS7A-218ENST00000543939 CSPP1Q1MSJ5 1256 aa23.11■■□□□ 1.29
COPS7A-218ENST00000543939 CDC42EP5Q6NZY7 148 aa23.11■■□□□ 1.29
COPS7A-218ENST00000543939 CATIPQ7Z7H3 387 aa23.11■■□□□ 1.29
COPS7A-218ENST00000543939 SLC44A5Q8NCS7 719 aa23.11■■□□□ 1.29
COPS7A-218ENST00000543939 FBXO18Q8NFZ0 1043 aa23.11■■□□□ 1.29
COPS7A-218ENST00000543939 NUP133Q8WUM0 1156 aa23.11■■□□□ 1.29
COPS7A-218ENST00000543939 ZNF287Q9HBT7 754 aa23.11■■□□□ 1.29
COPS7A-218ENST00000543939 FMNL1O95466 1100 aaPredicted RBP23.11■■□□□ 1.29
COPS7A-218ENST00000543939 SOGA3Q5TF21 947 aa23.11■■□□□ 1.29
COPS7A-218ENST00000543939 DDX4Q9NQI0 724 aaKnown RBP23.11■■□□□ 1.29
COPS7A-218ENST00000543939 MYH6P13533 1939 aa23.1■■□□□ 1.29
COPS7A-218ENST00000543939 DDAH1O94760 285 aa23.1■■□□□ 1.29
COPS7A-218ENST00000543939 RASA1P20936 1047 aa23.1■■□□□ 1.29
COPS7A-218ENST00000543939 CDK8P49336 464 aa23.1■■□□□ 1.29
COPS7A-218ENST00000543939 SSRP1Q08945 709 aaKnown RBP23.1■■□□□ 1.29
COPS7A-218ENST00000543939 TROAPQ12815 778 aa23.1■■□□□ 1.29
COPS7A-218ENST00000543939 RCSD1Q6JBY9 416 aa23.1■■□□□ 1.29
COPS7A-218ENST00000543939 ANKS1AQ92625 1134 aa23.1■■□□□ 1.29
COPS7A-218ENST00000543939 UPF1Q92900 1129 aaKnown RBP eCLIP23.1■■□□□ 1.29
COPS7A-218ENST00000543939 ALG1Q9BT22 464 aa23.1■■□□□ 1.29
COPS7A-218ENST00000543939 VPS33BQ9H267 617 aa23.1■■□□□ 1.29
COPS7A-218ENST00000543939 TCP11L1Q9NUJ3 509 aa23.1■■□□□ 1.29
COPS7A-218ENST00000543939 CALM1P0DP23 149 aa23.09■■□□□ 1.29
COPS7A-218ENST00000543939 CALM2P0DP24 149 aa23.09■■□□□ 1.29
COPS7A-218ENST00000543939 CALM3P0DP25 149 aa23.09■■□□□ 1.29
COPS7A-218ENST00000543939 PICALMQ13492 652 aa23.09■■□□□ 1.29
COPS7A-218ENST00000543939 NBPF11Q86T75 865 aa23.09■■□□□ 1.29
COPS7A-218ENST00000543939 ZNF444Q8N0Y2 327 aaPredicted RBP23.09■■□□□ 1.29
COPS7A-218ENST00000543939 SGIP1Q9BQI5 828 aa23.09■■□□□ 1.29
COPS7A-218ENST00000543939 IL17RBQ9NRM6 502 aa23.09■■□□□ 1.29
COPS7A-218ENST00000543939 COL4A5P29400 1685 aa23.09■■□□□ 1.29
COPS7A-218ENST00000543939 CCDC178Q5BJE1 867 aa23.08■■□□□ 1.29
COPS7A-218ENST00000543939 OTUD7BQ6GQQ9 843 aa23.08■■□□□ 1.29
COPS7A-218ENST00000543939 DGKHQ86XP1 1220 aa23.08■■□□□ 1.29
COPS7A-218ENST00000543939 AIFM3Q96NN9 605 aa23.08■■□□□ 1.29
COPS7A-218ENST00000543939 SLC26A6Q9BXS9 759 aa23.08■■□□□ 1.29
COPS7A-218ENST00000543939 ZNF277Q9NRM2 450 aaPredicted RBP23.08■■□□□ 1.29
COPS7A-218ENST00000543939 SERPINA10Q9UK55 444 aa23.08■■□□□ 1.29
COPS7A-218ENST00000543939 FER1L6Q2WGJ9 1857 aa23.08■■□□□ 1.29
COPS7A-218ENST00000543939 UBE2HP62256 183 aa23.08■■□□□ 1.28
COPS7A-218ENST00000543939 CAVIN1Q6NZI2 390 aaKnown RBP23.08■■□□□ 1.28
COPS7A-218ENST00000543939 CRACR2BQ8N4Y2 399 aaPredicted RBP23.08■■□□□ 1.28
COPS7A-218ENST00000543939 MYH8P13535 1937 aa23.07■■□□□ 1.28
COPS7A-218ENST00000543939 ELP1O95163 1332 aa23.07■■□□□ 1.28
COPS7A-218ENST00000543939 TSPY3P0CV98 308 aa23.07■■□□□ 1.28
COPS7A-218ENST00000543939 TSPY8P0CW00 308 aa23.07■■□□□ 1.28
COPS7A-218ENST00000543939 TTC6Q86TZ1 520 aa23.07■■□□□ 1.28
COPS7A-218ENST00000543939 LARGE2Q8N3Y3 721 aa23.07■■□□□ 1.28
COPS7A-218ENST00000543939 SCAND2PQ9GZW5 306 aaPredicted RBP23.07■■□□□ 1.28
COPS7A-218ENST00000543939 OSBPL5Q9H0X9 879 aaPredicted RBP23.07■■□□□ 1.28
COPS7A-218ENST00000543939 GJB4Q9NTQ9 266 aa23.07■■□□□ 1.28
COPS7A-218ENST00000543939 RBM28Q9NW13 759 aaKnown RBP23.07■■□□□ 1.28
COPS7A-218ENST00000543939 TFIP11Q9UBB9 837 aaKnown RBP23.07■■□□□ 1.28
COPS7A-218ENST00000543939 GABPAQ06546 454 aa23.06■■□□□ 1.28
COPS7A-218ENST00000543939 DALRD3Q5D0E6 543 aaKnown RBP23.06■■□□□ 1.28
COPS7A-218ENST00000543939 TRIM22Q8IYM9 498 aa23.06■■□□□ 1.28
COPS7A-218ENST00000543939 PCDHAC2Q9Y5I4 1007 aa23.06■■□□□ 1.28
COPS7A-218ENST00000543939 WASF1Q92558 559 aa23.05■■□□□ 1.28
COPS7A-218ENST00000543939 FUT2Q10981 343 aa23.05■■□□□ 1.28
COPS7A-218ENST00000543939 ATL3Q6DD88 541 aa23.05■■□□□ 1.28
COPS7A-218ENST00000543939 NEDD1Q8NHV4 660 aa23.05■■□□□ 1.28
COPS7A-218ENST00000543939 UBE2Q2LH0YL09 131 aa23.04■■□□□ 1.28
COPS7A-218ENST00000543939 NFIAQ12857 509 aa23.04■■□□□ 1.28
COPS7A-218ENST00000543939 KRT40Q6A162 431 aa23.04■■□□□ 1.28
COPS7A-218ENST00000543939 CMTR1Q8N1G2 835 aaKnown RBP23.04■■□□□ 1.28
COPS7A-218ENST00000543939 LEO1Q8WVC0 666 aaPredicted RBP23.04■■□□□ 1.28
COPS7A-218ENST00000543939 RNF26Q9BY78 433 aaPredicted RBP23.04■■□□□ 1.28
COPS7A-218ENST00000543939 RBM27Q9P2N5 1060 aaKnown RBP23.04■■□□□ 1.28
COPS7A-218ENST00000543939 CFAP45Q9UL16 551 aa23.04■■□□□ 1.28
COPS7A-218ENST00000543939 CD2APQ9Y5K6 639 aa23.04■■□□□ 1.28
COPS7A-218ENST00000543939 MYO3BQ8WXR4 1341 aa23.04■■□□□ 1.28
COPS7A-218ENST00000543939 DEXIO95424 95 aa23.03■■□□□ 1.28
COPS7A-218ENST00000543939 VIL1P09327 827 aaKnown RBP23.03■■□□□ 1.28
COPS7A-218ENST00000543939 GUCY1A2P33402 732 aa23.03■■□□□ 1.28
COPS7A-218ENST00000543939 RBM5P52756 815 aaKnown RBP eCLIP23.03■■□□□ 1.28
COPS7A-218ENST00000543939 KIF23Q02241 960 aaPredicted RBP23.03■■□□□ 1.28
COPS7A-218ENST00000543939 RSBN1LQ6PCB5 846 aaPredicted RBP23.03■■□□□ 1.28
COPS7A-218ENST00000543939 SPATA32Q96LK8 384 aa23.03■■□□□ 1.28
COPS7A-218ENST00000543939 IDI2Q9BXS1 227 aa23.03■■□□□ 1.28
COPS7A-218ENST00000543939 KAT14Q9H8E8 782 aa23.03■■□□□ 1.28
COPS7A-218ENST00000543939 TMEM63CQ9P1W3 806 aa23.03■■□□□ 1.28
COPS7A-218ENST00000543939 TMTC3Q6ZXV5 915 aa23.02■■□□□ 1.28
COPS7A-218ENST00000543939 CCDC82Q8N4S0 544 aa23.02■■□□□ 1.28
COPS7A-218ENST00000543939 ZNF396Q96N95 335 aaPredicted RBP23.02■■□□□ 1.28
COPS7A-218ENST00000543939 SIPA1L1O43166 1804 aa23.02■■□□□ 1.28
COPS7A-218ENST00000543939 PSMD14O00487 310 aa23.02■■□□□ 1.28
COPS7A-218ENST00000543939 NPM3O75607 178 aaKnown RBP23.02■■□□□ 1.28
COPS7A-218ENST00000543939 PLEKHA8P1O95397 391 aa23.02■■□□□ 1.28
COPS7A-218ENST00000543939 BRAPQ7Z569 592 aa23.02■■□□□ 1.28
COPS7A-218ENST00000543939 CTCFLQ8NI51 663 aaPredicted RBP23.02■■□□□ 1.28
COPS7A-218ENST00000543939 GMLQ99445 158 aa23.02■■□□□ 1.28
COPS7A-218ENST00000543939 MAP3K14Q99558 947 aa23.02■■□□□ 1.28
COPS7A-218ENST00000543939 FSD2A1L4K1 749 aa23.01■■□□□ 1.27
COPS7A-218ENST00000543939 KIF28PB7ZC32 967 aa23.01■■□□□ 1.27
COPS7A-218ENST00000543939 RAD17O75943 681 aa23.01■■□□□ 1.27
COPS7A-218ENST00000543939 PTGER2P43116 358 aa23.01■■□□□ 1.27
COPS7A-218ENST00000543939 TRIM29Q14134 588 aa23.01■■□□□ 1.27
COPS7A-218ENST00000543939 ZSCAN23Q3MJ62 389 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms