RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 FNBP4Q8N3X1 1017 aaPredicted RBP20.45■□□□□ 0.86
PTPN6-222ENST00000543744 OXER1Q8TDS5 423 aa20.45■□□□□ 0.86
PTPN6-222ENST00000543744 ATP8A2Q9NTI2 1148 aa20.45■□□□□ 0.86
PTPN6-222ENST00000543744 FBXO2Q9UK22 296 aaPredicted RBP20.45■□□□□ 0.86
PTPN6-222ENST00000543744 CEP131Q9UPN4 1083 aa20.45■□□□□ 0.86
PTPN6-222ENST00000543744 SMC2O95347 1197 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 GTF2F1P35269 517 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTPN6-222ENST00000543744 COL24A1Q17RW2 1714 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 TMED8Q6PL24 325 aaPredicted RBP20.44■□□□□ 0.86
PTPN6-222ENST00000543744 METTL16Q86W50 562 aaKnown RBP20.44■□□□□ 0.86
PTPN6-222ENST00000543744 DCP1AQ9NPI6 582 aaPredicted RBP20.44■□□□□ 0.86
PTPN6-222ENST00000543744 HOOK1Q9UJC3 728 aaKnown RBP20.44■□□□□ 0.86
PTPN6-222ENST00000543744 PCDHB6Q9Y5E3 794 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 PRPF3O43395 683 aaKnown RBP20.44■□□□□ 0.86
PTPN6-222ENST00000543744 ORC4O43929 436 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 PRDX5P30044 214 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 TM4SF1P30408 202 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 GSDMDP57764 484 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 FUT2Q10981 343 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 TROAPQ12815 778 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 SPECC1Q5M775 1068 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 ELOA2Q8IYF1 753 aaPredicted RBP20.44■□□□□ 0.86
PTPN6-222ENST00000543744 XPO4Q9C0E2 1151 aaKnown RBP20.44■□□□□ 0.86
PTPN6-222ENST00000543744 CABP5Q9NP86 173 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 IFNKQ9P0W0 207 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 IMPACTQ9P2X3 320 aa20.44■□□□□ 0.86
PTPN6-222ENST00000543744 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTPN6-222ENST00000543744 BAZ2AQ9UIF9 1905 aaKnown RBP20.43■□□□□ 0.86
PTPN6-222ENST00000543744 BTAF1O14981 1849 aa20.43■□□□□ 0.86
PTPN6-222ENST00000543744 DDAH1O94760 285 aa20.43■□□□□ 0.86
PTPN6-222ENST00000543744 SKILP12757 684 aa20.43■□□□□ 0.86
PTPN6-222ENST00000543744 PKN1Q16512 942 aa20.43■□□□□ 0.86
PTPN6-222ENST00000543744 VPS54Q9P1Q0 977 aa20.43■□□□□ 0.86
PTPN6-222ENST00000543744 V9GY48 417 aaPredicted RBP20.43■□□□□ 0.86
PTPN6-222ENST00000543744 ATP2B1P20020 1258 aa20.43■□□□□ 0.86
PTPN6-222ENST00000543744 FAM182BQ5T319 152 aa20.43■□□□□ 0.86
PTPN6-222ENST00000543744 OLFM4Q6UX06 510 aa20.43■□□□□ 0.86
PTPN6-222ENST00000543744 AMIGO3Q86WK7 504 aa20.43■□□□□ 0.86
PTPN6-222ENST00000543744 ZNF579Q8NAF0 562 aaKnown RBP20.43■□□□□ 0.86
PTPN6-222ENST00000543744 OSBPL5Q9H0X9 879 aaPredicted RBP20.43■□□□□ 0.86
PTPN6-222ENST00000543744 PDCL3Q9H2J4 239 aa20.43■□□□□ 0.86
PTPN6-222ENST00000543744 ARPP21Q9UBL0 812 aaPredicted RBP20.43■□□□□ 0.86
PTPN6-222ENST00000543744 USP21Q9UK80 565 aa20.43■□□□□ 0.86
PTPN6-222ENST00000543744 SRPRBQ9Y5M8 271 aaKnown RBP20.43■□□□□ 0.86
PTPN6-222ENST00000543744 PLEKHA8P1O95397 391 aa20.42■□□□□ 0.86
PTPN6-222ENST00000543744 KRT2P35908 639 aa20.42■□□□□ 0.86
PTPN6-222ENST00000543744 GRIN1Q05586 938 aa20.42■□□□□ 0.86
PTPN6-222ENST00000543744 TPD52L1Q16890 204 aaPredicted RBP20.42■□□□□ 0.86
PTPN6-222ENST00000543744 SPTY2D1Q68D10 685 aaPredicted RBP20.42■□□□□ 0.86
PTPN6-222ENST00000543744 TXNRD3Q86VQ6 643 aa20.42■□□□□ 0.86
PTPN6-222ENST00000543744 C16orf45Q96MC5 204 aaPredicted RBP20.42■□□□□ 0.86
PTPN6-222ENST00000543744 PHF20Q9BVI0 1012 aa20.42■□□□□ 0.86
PTPN6-222ENST00000543744 UBAP1LF5GYI3 381 aa20.41■□□□□ 0.86
PTPN6-222ENST00000543744 LMOD1P29536 600 aaPredicted RBP20.41■□□□□ 0.86
PTPN6-222ENST00000543744 RFC4P35249 363 aa20.41■□□□□ 0.86
PTPN6-222ENST00000543744 MYL5Q02045 173 aa20.41■□□□□ 0.86
PTPN6-222ENST00000543744 PCDHA5Q9Y5H7 936 aa20.41■□□□□ 0.86
PTPN6-222ENST00000543744 MYH2Q9UKX2 1941 aa20.41■□□□□ 0.86
PTPN6-222ENST00000543744 hCG_1642624A0A1W2PR95 340 aa20.41■□□□□ 0.86
PTPN6-222ENST00000543744 SBK1Q52WX2 424 aa20.41■□□□□ 0.86
PTPN6-222ENST00000543744 TMTC3Q6ZXV5 915 aa20.41■□□□□ 0.86
PTPN6-222ENST00000543744 DZIP1Q86YF9 867 aaKnown RBP20.41■□□□□ 0.86
PTPN6-222ENST00000543744 FOXP4Q8IVH2 680 aaPredicted RBP20.41■□□□□ 0.86
PTPN6-222ENST00000543744 SHISA4Q96DD7 197 aa20.41■□□□□ 0.86
PTPN6-222ENST00000543744 JAG2Q9Y219 1238 aa20.41■□□□□ 0.86
PTPN6-222ENST00000543744 TRIM75PA6NK02 468 aa20.4■□□□□ 0.86
PTPN6-222ENST00000543744 ZBTB22O15209 634 aa20.4■□□□□ 0.86
PTPN6-222ENST00000543744 POLR2DO15514 142 aaKnown RBP20.4■□□□□ 0.86
PTPN6-222ENST00000543744 CCZ1BP86790 482 aa20.4■□□□□ 0.86
PTPN6-222ENST00000543744 CCZ1P86791 482 aaPredicted RBP20.4■□□□□ 0.86
PTPN6-222ENST00000543744 MDM2Q00987 491 aaPredicted RBP20.4■□□□□ 0.86
PTPN6-222ENST00000543744 EVX2Q03828 476 aa20.4■□□□□ 0.86
PTPN6-222ENST00000543744 PDE4BQ07343 736 aa20.4■□□□□ 0.86
PTPN6-222ENST00000543744 TRAPPC3LQ5T215 181 aa20.4■□□□□ 0.86
PTPN6-222ENST00000543744 CTCFLQ8NI51 663 aaPredicted RBP20.4■□□□□ 0.86
PTPN6-222ENST00000543744 MAP7D2Q96T17 732 aa20.4■□□□□ 0.86
PTPN6-222ENST00000543744 ANKIB1Q9P2G1 1089 aa20.4■□□□□ 0.86
PTPN6-222ENST00000543744 CYP2D6P10635 497 aa20.39■□□□□ 0.86
PTPN6-222ENST00000543744 FANCCQ00597 558 aa20.39■□□□□ 0.86
PTPN6-222ENST00000543744 FAM47AQ5JRC9 791 aa20.39■□□□□ 0.86
PTPN6-222ENST00000543744 NOL10Q9BSC4 688 aaKnown RBP20.39■□□□□ 0.86
PTPN6-222ENST00000543744 BRMS1Q9HCU9 246 aa20.39■□□□□ 0.86
PTPN6-222ENST00000543744 IRS2Q9Y4H2 1338 aa20.39■□□□□ 0.86
PTPN6-222ENST00000543744 NHSQ6T4R5 1651 aa20.39■□□□□ 0.86
PTPN6-222ENST00000543744 MYH13Q9UKX3 1938 aa20.39■□□□□ 0.86
PTPN6-222ENST00000543744 RIOK3O14730 519 aaKnown RBP20.39■□□□□ 0.85
PTPN6-222ENST00000543744 NMT2O60551 498 aa20.39■□□□□ 0.85
PTPN6-222ENST00000543744 TNNT1P13805 278 aa20.39■□□□□ 0.85
PTPN6-222ENST00000543744 POSTNQ15063 836 aa20.39■□□□□ 0.85
PTPN6-222ENST00000543744 TMC6Q7Z403 805 aa20.39■□□□□ 0.85
PTPN6-222ENST00000543744 HSD3B7Q9H2F3 369 aa20.39■□□□□ 0.85
PTPN6-222ENST00000543744 FOXN1O15353 648 aa20.38■□□□□ 0.85
PTPN6-222ENST00000543744 MCM9Q9NXL9 1143 aa20.38■□□□□ 0.85
PTPN6-222ENST00000543744 SERTAD1Q9UHV2 236 aa20.38■□□□□ 0.85
PTPN6-222ENST00000543744 MORC2Q9Y6X9 1032 aaPredicted RBP20.38■□□□□ 0.85
PTPN6-222ENST00000543744 FAM205CA6NFA0 338 aa20.37■□□□□ 0.85
PTPN6-222ENST00000543744 TSPY2A6NKD2 308 aa20.37■□□□□ 0.85
PTPN6-222ENST00000543744 ATP1A3P13637 1013 aa20.37■□□□□ 0.85
PTPN6-222ENST00000543744 GRAPQ13588 217 aa20.37■□□□□ 0.85
PTPN6-222ENST00000543744 DHX8Q14562 1220 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms