RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 FANCCQ00597 558 aa12.29□□□□□ -0.44
CALU-206ENST00000542996 CUL4BQ13620 913 aa12.29□□□□□ -0.44
CALU-206ENST00000542996 SH3RF1Q7Z6J0 888 aa12.29□□□□□ -0.44
CALU-206ENST00000542996 SIPA1L1O43166 1804 aa12.29□□□□□ -0.44
CALU-206ENST00000542996 SEC31AO94979 1220 aaKnown RBP12.29□□□□□ -0.44
CALU-206ENST00000542996 E2F4Q16254 413 aa12.29□□□□□ -0.44
CALU-206ENST00000542996 SYT10Q6XYQ8 523 aa12.29□□□□□ -0.44
CALU-206ENST00000542996 NCOA7Q8NI08 942 aa12.29□□□□□ -0.44
CALU-206ENST00000542996 REXO2Q9Y3B8 237 aaKnown RBP12.29□□□□□ -0.44
CALU-206ENST00000542996 DMTNQ08495 405 aa12.29□□□□□ -0.44
CALU-206ENST00000542996 STAG2Q8N3U4 1231 aa12.29□□□□□ -0.44
CALU-206ENST00000542996 TMC6Q7Z403 805 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 TRIM10Q9UDY6 481 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 CCDC88AQ3V6T2 1871 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 ZRANB2O95218 330 aaKnown RBP eCLIP12.28□□□□□ -0.443e-9■■■□□ 16.4
CALU-206ENST00000542996 NLRP12P59046 1061 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 CSPP1Q1MSJ5 1256 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 TBC1D9BQ66K14 1250 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 PDILTQ8N807 584 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 BPIFA3Q9BQP9 254 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 UBXN6Q9BZV1 441 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 CFAP45Q9UL16 551 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 PATL2C9JE40 543 aaKnown RBP12.28□□□□□ -0.44
CALU-206ENST00000542996 YEATS4O95619 227 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 SLC26A6Q9BXS9 759 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 BCAS3Q9H6U6 928 aa12.28□□□□□ -0.44
CALU-206ENST00000542996 STK36Q9NRP7 1315 aa12.27□□□□□ -0.44
CALU-206ENST00000542996 POLR2DO15514 142 aaKnown RBP12.27□□□□□ -0.44
CALU-206ENST00000542996 CTR9Q6PD62 1173 aa12.27□□□□□ -0.44
CALU-206ENST00000542996 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.27□□□□□ -0.44
CALU-206ENST00000542996 SLC44A5Q8NCS7 719 aa12.27□□□□□ -0.44
CALU-206ENST00000542996 PPP1R3GB7ZBB8 358 aa12.27□□□□□ -0.45
CALU-206ENST00000542996 FMNL1O95466 1100 aaPredicted RBP12.27□□□□□ -0.45
CALU-206ENST00000542996 METAP2P50579 478 aaKnown RBP eCLIP12.27□□□□□ -0.456e-10■□□□□ 9.5
CALU-206ENST00000542996 GYS2P54840 703 aa12.27□□□□□ -0.45
CALU-206ENST00000542996 DNTTIP2Q5QJE6 756 aaKnown RBP12.27□□□□□ -0.45
CALU-206ENST00000542996 RASGRP4Q8TDF6 673 aa12.27□□□□□ -0.45
CALU-206ENST00000542996 FXR1P51114 621 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■□□□□ 9.2
CALU-206ENST00000542996 MORC3Q14149 939 aa12.27□□□□□ -0.45
CALU-206ENST00000542996 IMMTQ16891 758 aaKnown RBP12.27□□□□□ -0.45
CALU-206ENST00000542996 FAM47AQ5JRC9 791 aa12.27□□□□□ -0.45
CALU-206ENST00000542996 KRBA2Q6ZNG9 492 aa12.27□□□□□ -0.45
CALU-206ENST00000542996 ZNF592Q92610 1267 aa12.27□□□□□ -0.45
CALU-206ENST00000542996 SPEGQ15772 3267 aa12.27□□□□□ -0.45
CALU-206ENST00000542996 SOWAHDA6NJG2 315 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 PDE8AO60658 829 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 HMGB1P09429 215 aaKnown RBP12.26□□□□□ -0.45
CALU-206ENST00000542996 ANP32BQ92688 251 aaKnown RBP12.26□□□□□ -0.45
CALU-206ENST00000542996 FOCADQ5VW36 1801 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 PTPREP23469 700 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 DIS3L2Q8IYB7 885 aaKnown RBP12.26□□□□□ -0.45
CALU-206ENST00000542996 STAG1Q8WVM7 1258 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 FGRP09769 529 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 NFIXQ14938 502 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 ALX1Q15699 326 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 AKNAD1Q5T1N1 836 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 OLFM4Q6UX06 510 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 NOSTRINQ8IVI9 506 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 GLIS3Q8NEA6 775 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 MINPP1Q9UNW1 487 aa12.26□□□□□ -0.45
CALU-206ENST00000542996 MYH7BA7E2Y1 1941 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 IFNAR1P17181 557 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 PHF20Q9BVI0 1012 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 SZT2Q5T011 3432 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 SPATA31A1Q5TZJ5 1347 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 KLK7P49862 253 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 NR1I3Q14994 352 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 CCDC158Q5M9N0 1113 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 VSTM4Q8IW00 320 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 HPS3Q969F9 1004 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 TMEM60Q9H2L4 133 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 TFCP2L1Q9NZI6 479 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 LTBP4Q8N2S1 1624 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 SMTNL1A8MU46 457 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 LIFRP42702 1097 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 ERVK-24P63145 666 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 LPIN2Q92539 896 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 GJA10Q969M2 543 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 DYNLL2Q96FJ2 89 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 PKNOX2Q96KN3 472 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 UTP14AQ9BVJ6 771 aaKnown RBP12.25□□□□□ -0.45
CALU-206ENST00000542996 CNNM1Q9NRU3 951 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 KCNH3Q9ULD8 1083 aa12.25□□□□□ -0.45
CALU-206ENST00000542996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.25□□□□□ -0.45
CALU-206ENST00000542996 LOC102724428A0A0B4J2F2 783 aa12.24□□□□□ -0.45
CALU-206ENST00000542996 SIK1P57059 783 aa12.24□□□□□ -0.45
CALU-206ENST00000542996 CABP5Q9NP86 173 aa12.24□□□□□ -0.45
CALU-206ENST00000542996 CLCN6P51797 869 aa12.24□□□□□ -0.45
CALU-206ENST00000542996 PUM3Q15397 648 aaKnown RBP12.24□□□□□ -0.45
CALU-206ENST00000542996 MORC2Q9Y6X9 1032 aaPredicted RBP12.24□□□□□ -0.45
CALU-206ENST00000542996 TNKSO95271 1327 aa12.24□□□□□ -0.45
CALU-206ENST00000542996 WDR19Q8NEZ3 1342 aa12.24□□□□□ -0.45
CALU-206ENST00000542996 CNTNAP5Q8WYK1 1306 aa12.24□□□□□ -0.45
CALU-206ENST00000542996 SLC3A2P08195 630 aaKnown RBP12.23□□□□□ -0.45
CALU-206ENST00000542996 POLD1P28340 1107 aa12.23□□□□□ -0.45
CALU-206ENST00000542996 PLCD1P51178 756 aa12.23□□□□□ -0.45
CALU-206ENST00000542996 TMEM67Q5HYA8 995 aa12.23□□□□□ -0.45
CALU-206ENST00000542996 RRP12Q5JTH9 1297 aaKnown RBP12.23□□□□□ -0.45
CALU-206ENST00000542996 NSUN4Q96CB9 384 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms