RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 PRDM5Q9NQX1 630 aaPredicted RBP7.17□□□□□ -1.26
MDM2-228ENST00000542502 FAM53CQ9NYF3 392 aa7.17□□□□□ -1.26
MDM2-228ENST00000542502 PCDHA4Q9UN74 947 aa7.17□□□□□ -1.26
MDM2-228ENST00000542502 MAPK8IP1Q9UQF2 711 aa7.17□□□□□ -1.26
MDM2-228ENST00000542502 PITPNM2Q9BZ72 1349 aa7.17□□□□□ -1.26
MDM2-228ENST00000542502 CUL7Q14999 1698 aa7.16□□□□□ -1.26
MDM2-228ENST00000542502 LRRC10BA6NIK2 292 aa7.16□□□□□ -1.26
MDM2-228ENST00000542502 FBXO24O75426 580 aa7.16□□□□□ -1.26
MDM2-228ENST00000542502 KCNMB1Q16558 191 aa7.16□□□□□ -1.26
MDM2-228ENST00000542502 ARMCX6Q7L4S7 300 aa7.16□□□□□ -1.26
MDM2-228ENST00000542502 BHLHE22Q8NFJ8 381 aaPredicted RBP7.16□□□□□ -1.26
MDM2-228ENST00000542502 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.16□□□□□ -1.26
MDM2-228ENST00000542502 LMCD1Q9NZU5 365 aa7.16□□□□□ -1.26
MDM2-228ENST00000542502 CYP8B1Q9UNU6 501 aa7.16□□□□□ -1.26
MDM2-228ENST00000542502 CTNND2Q9UQB3 1225 aa7.16□□□□□ -1.26
MDM2-228ENST00000542502 ZNF503-AS2A6NEH8 195 aa7.15□□□□□ -1.26
MDM2-228ENST00000542502 GIPC1O14908 333 aa7.15□□□□□ -1.26
MDM2-228ENST00000542502 LRIG2O94898 1065 aa7.15□□□□□ -1.26
MDM2-228ENST00000542502 RASIP1Q5U651 963 aa7.15□□□□□ -1.26
MDM2-228ENST00000542502 ZNF507Q8TCN5 953 aa7.15□□□□□ -1.26
MDM2-228ENST00000542502 ELMO3Q96BJ8 720 aa7.15□□□□□ -1.26
MDM2-228ENST00000542502 FOXQ1Q9C009 403 aa7.15□□□□□ -1.26
MDM2-228ENST00000542502 FHAD1B1AJZ9 1412 aa7.15□□□□□ -1.27
MDM2-228ENST00000542502 SYNJ2O15056 1496 aa7.15□□□□□ -1.27
MDM2-228ENST00000542502 MAPK8P45983 427 aa7.14□□□□□ -1.27
MDM2-228ENST00000542502 SPOCD1Q6ZMY3 1216 aa7.14□□□□□ -1.27
MDM2-228ENST00000542502 SNAPC4Q5SXM2 1469 aa7.13□□□□□ -1.27
MDM2-228ENST00000542502 SLITRK5O94991 958 aa7.13□□□□□ -1.27
MDM2-228ENST00000542502 BRD1O95696 1058 aa7.13□□□□□ -1.27
MDM2-228ENST00000542502 AFMP43652 599 aa7.13□□□□□ -1.27
MDM2-228ENST00000542502 FMR1Q06787 632 aaKnown RBP eCLIP7.13□□□□□ -1.27
MDM2-228ENST00000542502 MLANAQ16655 118 aa7.13□□□□□ -1.27
MDM2-228ENST00000542502 FBLN7Q53RD9 439 aa7.13□□□□□ -1.27
MDM2-228ENST00000542502 PCNX4Q63HM2 1172 aa7.13□□□□□ -1.27
MDM2-228ENST00000542502 ALG1LQ6GMV1 187 aa7.13□□□□□ -1.27
MDM2-228ENST00000542502 INPP5AQ14642 412 aa7.12□□□□□ -1.27
MDM2-228ENST00000542502 C22orf34Q6ZV56 151 aa7.12□□□□□ -1.27
MDM2-228ENST00000542502 CYFIP1Q7L576 1253 aa7.12□□□□□ -1.27
MDM2-228ENST00000542502 HSPA12BQ96MM6 686 aa7.12□□□□□ -1.27
MDM2-228ENST00000542502 SETDB2Q96T68 719 aa7.12□□□□□ -1.27
MDM2-228ENST00000542502 SEMA3GQ9NS98 782 aa7.12□□□□□ -1.27
MDM2-228ENST00000542502 PRAMEF27A3QJZ7 478 aa7.11□□□□□ -1.27
MDM2-228ENST00000542502 FAM155AB1AL88 458 aaPredicted RBP7.11□□□□□ -1.27
MDM2-228ENST00000542502 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.11□□□□□ -1.27
MDM2-228ENST00000542502 CELA3AP09093 270 aa7.11□□□□□ -1.27
MDM2-228ENST00000542502 ZNF865P0CJ78 1059 aaPredicted RBP7.11□□□□□ -1.27
MDM2-228ENST00000542502 SLBPQ14493 270 aaKnown RBP eCLIP7.11□□□□□ -1.27
MDM2-228ENST00000542502 LCE4AQ5TA78 99 aa7.11□□□□□ -1.27
MDM2-228ENST00000542502 FYB2Q5VWT5 728 aa7.11□□□□□ -1.27
MDM2-228ENST00000542502 LRFN4Q6PJG9 635 aa7.11□□□□□ -1.27
MDM2-228ENST00000542502 HDXQ7Z353 690 aa7.11□□□□□ -1.27
MDM2-228ENST00000542502 ZSCAN29Q8IWY8 852 aaPredicted RBP7.11□□□□□ -1.27
MDM2-228ENST00000542502 LIN37Q96GY3 246 aaPredicted RBP7.11□□□□□ -1.27
MDM2-228ENST00000542502 CARS2Q9HA77 564 aaKnown RBP7.11□□□□□ -1.27
MDM2-228ENST00000542502 FBRSQ9HAH7 460 aa7.11□□□□□ -1.27
MDM2-228ENST00000542502 TPX2Q9ULW0 747 aaKnown RBP7.11□□□□□ -1.27
MDM2-228ENST00000542502 SPG7Q9UQ90 795 aa7.11□□□□□ -1.27
MDM2-228ENST00000542502 ADAMTS12P58397 1594 aa7.11□□□□□ -1.27
MDM2-228ENST00000542502 CARMIL1Q5VZK9 1371 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 PRR33A8MZF0 331 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 GLI1P08151 1106 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 CAP2P40123 477 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 PTPN11Q06124 597 aaPredicted RBP7.1□□□□□ -1.27
MDM2-228ENST00000542502 KRTAP19-4Q3LI73 84 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 SFRP5Q5T4F7 317 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 MFSD4AQ8N468 514 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 MFSD2AQ8NA29 543 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 PLPPR2Q96GM1 343 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 C12orf49Q9H741 205 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 ATP13A1Q9HD20 1204 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 FAM8A1Q9UBU6 413 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 WWC3Q9ULE0 1092 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 CHD1O14646 1710 aa7.1□□□□□ -1.27
MDM2-228ENST00000542502 CNTNAP4Q9C0A0 1308 aa7.09□□□□□ -1.27
MDM2-228ENST00000542502 ATP2B2Q01814 1243 aa7.09□□□□□ -1.27
MDM2-228ENST00000542502 CDKAL1Q5VV42 579 aa7.09□□□□□ -1.27
MDM2-228ENST00000542502 NPAS4Q8IUM7 802 aa7.09□□□□□ -1.27
MDM2-228ENST00000542502 KIRREL1Q96J84 757 aa7.09□□□□□ -1.27
MDM2-228ENST00000542502 ASB16Q96NS5 453 aa7.09□□□□□ -1.27
MDM2-228ENST00000542502 MIPEPQ99797 713 aa7.09□□□□□ -1.27
MDM2-228ENST00000542502 KRTAP4-9Q9BYQ8 210 aa7.09□□□□□ -1.27
MDM2-228ENST00000542502 WNT10AQ9GZT5 417 aa7.09□□□□□ -1.27
MDM2-228ENST00000542502 GRIN2AQ12879 1464 aa7.09□□□□□ -1.27
MDM2-228ENST00000542502 TSPAN15O95858 294 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 USP17L7P0C7H9 530 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 GDNFP39905 211 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 RAP1GAPP47736 663 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 NKG7Q16617 165 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 SV2BQ7L1I2 683 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 CILP2Q8IUL8 1156 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 GAL3ST3Q96A11 431 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 PPP1R16BQ96T49 567 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 C19orf73Q9NVV2 129 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 ST14Q9Y5Y6 855 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 SNCAIPQ9Y6H5 919 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 CAPN6Q9Y6Q1 641 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 RAPGEF2Q9Y4G8 1499 aa7.08□□□□□ -1.28
MDM2-228ENST00000542502 H3BS24 57 aa7.07□□□□□ -1.28
MDM2-228ENST00000542502 ETF1P62495 437 aaKnown RBP7.07□□□□□ -1.28
MDM2-228ENST00000542502 FGD1P98174 961 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms