RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 ZBTB21Q9ULJ3 1066 aa24.26■■□□□ 1.47
DDX11-220ENST00000542244 BACE1P56817 501 aa24.25■■□□□ 1.47
DDX11-220ENST00000542244 TRIM32Q13049 653 aa24.25■■□□□ 1.47
DDX11-220ENST00000542244 SLFNL1Q499Z3 407 aa24.25■■□□□ 1.47
DDX11-220ENST00000542244 COLQQ9Y215 455 aaPredicted RBP24.25■■□□□ 1.47
DDX11-220ENST00000542244 IRF5Q13568 498 aa24.24■■□□□ 1.47
DDX11-220ENST00000542244 U2AF1L4Q8WU68 220 aaKnown RBP24.24■■□□□ 1.47
DDX11-220ENST00000542244 RIOK1Q9BRS2 568 aaKnown RBP24.24■■□□□ 1.47
DDX11-220ENST00000542244 AS3MTQ9HBK9 375 aa24.24■■□□□ 1.47
DDX11-220ENST00000542244 EMILIN3Q9NT22 766 aa24.24■■□□□ 1.47
DDX11-220ENST00000542244 GJD2Q9UKL4 321 aa24.24■■□□□ 1.47
DDX11-220ENST00000542244 PNMA3Q9UL41 463 aa24.24■■□□□ 1.47
DDX11-220ENST00000542244 GH2P01242 217 aa24.23■■□□□ 1.47
DDX11-220ENST00000542244 ASNSP08243 561 aa24.23■■□□□ 1.47
DDX11-220ENST00000542244 UBXN2AP68543 259 aa24.23■■□□□ 1.47
DDX11-220ENST00000542244 C20orf194Q5TEA3 1177 aa24.23■■□□□ 1.47
DDX11-220ENST00000542244 ZBTB40Q9NUA8 1239 aa24.23■■□□□ 1.47
DDX11-220ENST00000542244 CHGBP05060 677 aa24.22■■□□□ 1.47
DDX11-220ENST00000542244 USP5P45974 858 aa24.22■■□□□ 1.47
DDX11-220ENST00000542244 PLCD1P51178 756 aa24.22■■□□□ 1.47
DDX11-220ENST00000542244 ERC1Q8IUD2 1116 aa24.22■■□□□ 1.47
DDX11-220ENST00000542244 TBC1D2Q9BYX2 928 aa24.22■■□□□ 1.47
DDX11-220ENST00000542244 PLXNB2O15031 1838 aa24.21■■□□□ 1.47
DDX11-220ENST00000542244 GCLCP48506 637 aaPredicted RBP24.21■■□□□ 1.47
DDX11-220ENST00000542244 Q3C1V9 767 aa24.21■■□□□ 1.47
DDX11-220ENST00000542244 TATDN1Q6P1N9 297 aa24.21■■□□□ 1.47
DDX11-220ENST00000542244 PXYLP1Q8TE99 480 aa24.21■■□□□ 1.47
DDX11-220ENST00000542244 COA7Q96BR5 231 aa24.21■■□□□ 1.47
DDX11-220ENST00000542244 TRIM34Q9BYJ4 488 aa24.21■■□□□ 1.47
DDX11-220ENST00000542244 MORF4L1Q9UBU8 362 aa24.21■■□□□ 1.47
DDX11-220ENST00000542244 MYH1P12882 1939 aa24.21■■□□□ 1.47
DDX11-220ENST00000542244 USP17L10C9JJH3 530 aa24.2■■□□□ 1.46
DDX11-220ENST00000542244 SGPL1O95470 568 aa24.2■■□□□ 1.46
DDX11-220ENST00000542244 HLA-DOAP06340 250 aa24.2■■□□□ 1.46
DDX11-220ENST00000542244 HOXA7P31268 230 aaPredicted RBP24.2■■□□□ 1.46
DDX11-220ENST00000542244 MAP3K12Q12852 859 aa24.2■■□□□ 1.46
DDX11-220ENST00000542244 ZYXQ15942 572 aaKnown RBP24.2■■□□□ 1.46
DDX11-220ENST00000542244 GCC1Q96CN9 775 aa24.2■■□□□ 1.46
DDX11-220ENST00000542244 DEFB118Q96PH6 123 aa24.2■■□□□ 1.46
DDX11-220ENST00000542244 RBPJLQ9UBG7 517 aa24.2■■□□□ 1.46
DDX11-220ENST00000542244 PDE6AP16499 860 aa24.19■■□□□ 1.46
DDX11-220ENST00000542244 HERVK_113P62684 666 aa24.19■■□□□ 1.46
DDX11-220ENST00000542244 ACER1Q8TDN7 264 aa24.19■■□□□ 1.46
DDX11-220ENST00000542244 DNAJC2Q99543 621 aaKnown RBP24.19■■□□□ 1.46
DDX11-220ENST00000542244 TMOD4Q9NZQ9 345 aa24.19■■□□□ 1.46
DDX11-220ENST00000542244 DDX60LQ5H9U9 1706 aaKnown RBP24.18■■□□□ 1.46
DDX11-220ENST00000542244 TCRBV5S4A2TA0A5A2 114 aa24.18■■□□□ 1.46
DDX11-220ENST00000542244 SMIM22K7EJ46 135 aa24.18■■□□□ 1.46
DDX11-220ENST00000542244 GOLIM4O00461 696 aa24.18■■□□□ 1.46
DDX11-220ENST00000542244 CYP2D6P10635 497 aa24.18■■□□□ 1.46
DDX11-220ENST00000542244 SHMT1P34896 483 aa24.18■■□□□ 1.46
DDX11-220ENST00000542244 IRX3P78415 501 aaPredicted RBP24.18■■□□□ 1.46
DDX11-220ENST00000542244 PABPC4Q13310 644 aaKnown RBP eCLIP24.18■■□□□ 1.46
DDX11-220ENST00000542244 NKX2-3Q8TAU0 364 aa24.18■■□□□ 1.46
DDX11-220ENST00000542244 DPF3Q92784 378 aa24.18■■□□□ 1.46
DDX11-220ENST00000542244 PAK6Q9NQU5 681 aaPredicted RBP24.18■■□□□ 1.46
DDX11-220ENST00000542244 C19orf81C9J6K1 198 aa24.17■■□□□ 1.46
DDX11-220ENST00000542244 IGSF3O75054 1194 aa24.17■■□□□ 1.46
DDX11-220ENST00000542244 FARP2O94887 1054 aaPredicted RBP24.17■■□□□ 1.46
DDX11-220ENST00000542244 GUCY1A2P33402 732 aa24.17■■□□□ 1.46
DDX11-220ENST00000542244 SLC9C2Q5TAH2 1124 aa24.17■■□□□ 1.46
DDX11-220ENST00000542244 RPAP2Q8IXW5 612 aaPredicted RBP24.17■■□□□ 1.46
DDX11-220ENST00000542244 PORCNQ9H237 461 aa24.17■■□□□ 1.46
DDX11-220ENST00000542244 SERPINB13Q9UIV8 391 aa24.17■■□□□ 1.46
DDX11-220ENST00000542244 ZNF532Q9HCE3 1301 aa24.16■■□□□ 1.46
DDX11-220ENST00000542244 MAGEB6P1A0A0J9YX57 407 aa24.16■■□□□ 1.46
DDX11-220ENST00000542244 FXR1P51114 621 aaKnown RBP eCLIP24.16■■□□□ 1.46
DDX11-220ENST00000542244 LCORLQ8N3X6 602 aa24.16■■□□□ 1.46
DDX11-220ENST00000542244 DIS3LQ8TF46 1054 aaKnown RBP24.16■■□□□ 1.46
DDX11-220ENST00000542244 SDR42E1Q8WUS8 393 aa24.16■■□□□ 1.46
DDX11-220ENST00000542244 TRIB2Q92519 343 aa24.16■■□□□ 1.46
DDX11-220ENST00000542244 KIF1BPQ96EK5 621 aa24.16■■□□□ 1.46
DDX11-220ENST00000542244 CNMDO75829 334 aa24.15■■□□□ 1.46
DDX11-220ENST00000542244 TFRCP02786 760 aaKnown RBP24.15■■□□□ 1.46
DDX11-220ENST00000542244 CYP2B6P20813 491 aa24.15■■□□□ 1.46
DDX11-220ENST00000542244 HSP90AB4PQ58FF6 505 aa24.15■■□□□ 1.46
DDX11-220ENST00000542244 CLASRPQ8N2M8 674 aaKnown RBP24.15■■□□□ 1.46
DDX11-220ENST00000542244 PAGR1Q9BTK6 254 aa24.15■■□□□ 1.46
DDX11-220ENST00000542244 EHD4Q9H223 541 aa24.15■■□□□ 1.46
DDX11-220ENST00000542244 RCAN3Q9UKA8 241 aa24.15■■□□□ 1.46
DDX11-220ENST00000542244 DDX19BQ9UMR2 479 aa24.15■■□□□ 1.46
DDX11-220ENST00000542244 CEP290O15078 2479 aa24.14■■□□□ 1.45
DDX11-220ENST00000542244 PRKAB2O43741 272 aa24.14■■□□□ 1.45
DDX11-220ENST00000542244 GABPAQ06546 454 aa24.14■■□□□ 1.45
DDX11-220ENST00000542244 RAB3GAP1Q15042 981 aa24.14■■□□□ 1.45
DDX11-220ENST00000542244 USP17L2Q6R6M4 530 aa24.14■■□□□ 1.45
DDX11-220ENST00000542244 CHRDL2Q6WN34 429 aa24.14■■□□□ 1.45
DDX11-220ENST00000542244 SLC44A5Q8NCS7 719 aa24.14■■□□□ 1.45
DDX11-220ENST00000542244 CRISPLD2Q9H0B8 497 aa24.14■■□□□ 1.45
DDX11-220ENST00000542244 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.14■■□□□ 1.45
DDX11-220ENST00000542244 BOLA2Q9H3K6 86 aa24.14■■□□□ 1.45
DDX11-220ENST00000542244 GINM1Q9NU53 330 aa24.14■■□□□ 1.45
DDX11-220ENST00000542244 SMARCA5O60264 1052 aaPredicted RBP24.13■■□□□ 1.45
DDX11-220ENST00000542244 IFIT2P09913 472 aaKnown RBP24.13■■□□□ 1.45
DDX11-220ENST00000542244 ABCB5Q2M3G0 1257 aa24.13■■□□□ 1.45
DDX11-220ENST00000542244 CERKLQ49MI3 558 aaPredicted RBP24.13■■□□□ 1.45
DDX11-220ENST00000542244 GPRC5AQ8NFJ5 357 aa24.13■■□□□ 1.45
DDX11-220ENST00000542244 ARMT1Q9H993 441 aa24.13■■□□□ 1.45
DDX11-220ENST00000542244 PCDH10Q9P2E7 1040 aa24.13■■□□□ 1.45
DDX11-220ENST00000542244 SEPT2Q15019 361 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms