RNA–Protein interactions for RNA: ENST00000542064.1

AP000439.2-201, humanhuman

TSL 2 BASIC

Gene AP000439.2, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.2-201ENST00000542064 ZFYVE28Q9HCC9 887 aa15.47■□□□□ 0.07
AP000439.2-201ENST00000542064 EPB41L4AQ9HCS5 686 aaPredicted RBP15.47■□□□□ 0.07
AP000439.2-201ENST00000542064 HERC5Q9UII4 1024 aaKnown RBP15.47■□□□□ 0.07
AP000439.2-201ENST00000542064 MKI67P46013 3256 aaKnown RBP15.46■□□□□ 0.07
AP000439.2-201ENST00000542064 HDAC1Q13547 482 aaPredicted RBP15.46■□□□□ 0.07
AP000439.2-201ENST00000542064 ANKRD45Q5TZF3 282 aa15.46■□□□□ 0.07
AP000439.2-201ENST00000542064 B4GALNT3Q6L9W6 998 aa15.46■□□□□ 0.07
AP000439.2-201ENST00000542064 ACER1Q8TDN7 264 aa15.46■□□□□ 0.07
AP000439.2-201ENST00000542064 DHX36Q9H2U1 1008 aaKnown RBP15.46■□□□□ 0.07
AP000439.2-201ENST00000542064 PTCH2Q9Y6C5 1203 aa15.46■□□□□ 0.07
AP000439.2-201ENST00000542064 FOXP2O15409 715 aa15.45■□□□□ 0.06
AP000439.2-201ENST00000542064 BCRP11274 1271 aa15.45■□□□□ 0.06
AP000439.2-201ENST00000542064 ZYXQ15942 572 aaKnown RBP15.45■□□□□ 0.06
AP000439.2-201ENST00000542064 OTUD7BQ6GQQ9 843 aa15.45■□□□□ 0.06
AP000439.2-201ENST00000542064 TATDN1Q6P1N9 297 aa15.45■□□□□ 0.06
AP000439.2-201ENST00000542064 KBTBD3Q8NAB2 608 aa15.45■□□□□ 0.06
AP000439.2-201ENST00000542064 TRIM47Q96LD4 638 aa15.45■□□□□ 0.06
AP000439.2-201ENST00000542064 CRNKL1Q9BZJ0 848 aaKnown RBP15.45■□□□□ 0.06
AP000439.2-201ENST00000542064 LNPKQ9C0E8 428 aa15.45■□□□□ 0.06
AP000439.2-201ENST00000542064 MCM9Q9NXL9 1143 aa15.45■□□□□ 0.06
AP000439.2-201ENST00000542064 PARP14Q460N5 1801 aa15.45■□□□□ 0.06
AP000439.2-201ENST00000542064 RLFQ13129 1914 aa15.45■□□□□ 0.06
AP000439.2-201ENST00000542064 USP17L5A8MUK1 530 aa15.44■□□□□ 0.06
AP000439.2-201ENST00000542064 MX1P20591 662 aa15.44■□□□□ 0.06
AP000439.2-201ENST00000542064 LACTBP83111 547 aaPredicted RBP15.44■□□□□ 0.06
AP000439.2-201ENST00000542064 UBE3CQ15386 1083 aa15.44■□□□□ 0.06
AP000439.2-201ENST00000542064 KIAA1755Q5JYT7 1200 aa15.44■□□□□ 0.06
AP000439.2-201ENST00000542064 FBXO46Q6PJ61 603 aaPredicted RBP15.44■□□□□ 0.06
AP000439.2-201ENST00000542064 CCDC129Q6ZRS4 1044 aa15.44■□□□□ 0.06
AP000439.2-201ENST00000542064 STK11IPQ8N1F8 1099 aa15.44■□□□□ 0.06
AP000439.2-201ENST00000542064 ZNF280CQ8ND82 737 aa15.44■□□□□ 0.06
AP000439.2-201ENST00000542064 SERPINB13Q9UIV8 391 aa15.44■□□□□ 0.06
AP000439.2-201ENST00000542064 RBBP6Q7Z6E9 1792 aaKnown RBP15.44■□□□□ 0.06
AP000439.2-201ENST00000542064 MYCP01106 439 aaPredicted RBP15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 POLR3DP05423 398 aaPredicted RBP15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 HLA-DOAP06340 250 aa15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 AKR1B1P15121 316 aa15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 SEPT2Q15019 361 aa15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 FOXP4Q8IVH2 680 aaPredicted RBP15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 ERO1AQ96HE7 468 aa15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 STRBPQ96SI9 672 aaKnown RBP15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 EHD4Q9H223 541 aa15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 EFCC1Q9HA90 598 aa15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 EMILIN3Q9NT22 766 aa15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 AGTPBP1Q9UPW5 1226 aa15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 PTPN22Q9Y2R2 807 aa15.43■□□□□ 0.06
AP000439.2-201ENST00000542064 A0A1W2PRG0 241 aa15.42■□□□□ 0.06
AP000439.2-201ENST00000542064 POTEFA5A3E0 1075 aa15.42■□□□□ 0.06
AP000439.2-201ENST00000542064 GSG1L2A8MUP6 293 aa15.42■□□□□ 0.06
AP000439.2-201ENST00000542064 USP17L12C9JPN9 530 aa15.42■□□□□ 0.06
AP000439.2-201ENST00000542064 USP17L21D6R901 530 aa15.42■□□□□ 0.06
AP000439.2-201ENST00000542064 CTR9Q6PD62 1173 aa15.42■□□□□ 0.06
AP000439.2-201ENST00000542064 ZCCHC17Q9NP64 241 aaKnown RBP15.42■□□□□ 0.06
AP000439.2-201ENST00000542064 GABRQQ9UN88 632 aa15.42■□□□□ 0.06
AP000439.2-201ENST00000542064 TACC3Q9Y6A5 838 aa15.42■□□□□ 0.06
AP000439.2-201ENST00000542064 SLC4A4Q9Y6R1 1079 aa15.42■□□□□ 0.06
AP000439.2-201ENST00000542064 RNF113AO15541 343 aaKnown RBP15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 IGSF3O75054 1194 aa15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 PDE1AP54750 535 aa15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 RAB3GAP1Q15042 981 aa15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 SH3D19Q5HYK7 790 aa15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 SIAH1Q8IUQ4 282 aa15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 SMC5Q8IY18 1101 aa15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 ANKRD13CQ8N6S4 541 aa15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 SH3TC2Q8TF17 1288 aa15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 WDR18Q9BV38 432 aa15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 ASCC2Q9H1I8 757 aaPredicted RBP15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 TXNRD2Q9NNW7 524 aa15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 TTC41PQ6P2S7 1318 aa15.41■□□□□ 0.06
AP000439.2-201ENST00000542064 A0A0G2JMZ2 1700 aa15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 GPAA1O43292 621 aa15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 ASNSP08243 561 aa15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 OSBPP22059 807 aa15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 PDE4AP27815 886 aa15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 PSMC4P43686 418 aa15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 BACE1P56817 501 aa15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 CERKLQ49MI3 558 aaPredicted RBP15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 C12orf60Q5U649 245 aa15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 APPBP2Q92624 585 aa15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 PARK7Q99497 189 aaKnown RBP15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 TRIM34Q9BYJ4 488 aa15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 COL11A1P12107 1806 aaPredicted RBP15.4■□□□□ 0.06
AP000439.2-201ENST00000542064 PRKCZQ05513 592 aa15.39■□□□□ 0.05
AP000439.2-201ENST00000542064 ABCB5Q2M3G0 1257 aa15.39■□□□□ 0.05
AP000439.2-201ENST00000542064 VPS53Q5VIR6 699 aa15.39■□□□□ 0.05
AP000439.2-201ENST00000542064 FASTKD5Q7L8L6 764 aaKnown RBP15.39■□□□□ 0.05
AP000439.2-201ENST00000542064 TTC6Q86TZ1 520 aa15.39■□□□□ 0.05
AP000439.2-201ENST00000542064 SKAP1Q86WV1 359 aa15.39■□□□□ 0.05
AP000439.2-201ENST00000542064 PROCA1Q8NCQ7 364 aaPredicted RBP15.39■□□□□ 0.05
AP000439.2-201ENST00000542064 NKX2-3Q8TAU0 364 aa15.39■□□□□ 0.05
AP000439.2-201ENST00000542064 P2RX7Q99572 595 aaKnown RBP15.39■□□□□ 0.05
AP000439.2-201ENST00000542064 FSD1Q9BTV5 496 aa15.39■□□□□ 0.05
AP000439.2-201ENST00000542064 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.39■□□□□ 0.05
AP000439.2-201ENST00000542064 STAP2Q9UGK3 403 aa15.39■□□□□ 0.05
AP000439.2-201ENST00000542064 KIAA0100Q14667 2235 aaKnown RBP15.38■□□□□ 0.05
AP000439.2-201ENST00000542064 A0A0D9SFI3 127 aa15.38■□□□□ 0.05
AP000439.2-201ENST00000542064 GLRX3O76003 335 aaKnown RBP15.38■□□□□ 0.05
AP000439.2-201ENST00000542064 CDK8P49336 464 aa15.38■□□□□ 0.05
AP000439.2-201ENST00000542064 ZMYM1Q5SVZ6 1142 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms