RNA–Protein interactions for RNA: ENST00000541893.5

TMEM258-206, Transcript of transmembrane protein 258, humanhuman

TSL 5

Gene TMEM258, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-206ENST00000541893 PLEKHG6Q3KR16 790 aa6.77□□□□□ -1.33
TMEM258-206ENST00000541893 PLEKHG4Q58EX7 1191 aa6.77□□□□□ -1.33
TMEM258-206ENST00000541893 MAP1SQ66K74 1059 aaPredicted RBP6.77□□□□□ -1.33
TMEM258-206ENST00000541893 ATCAYQ86WG3 371 aa6.77□□□□□ -1.33
TMEM258-206ENST00000541893 PNISRQ8TF01 805 aaKnown RBP6.77□□□□□ -1.33
TMEM258-206ENST00000541893 SEC16BQ96JE7 1060 aa6.77□□□□□ -1.33
TMEM258-206ENST00000541893 IRF2BPLQ9H1B7 796 aa6.77□□□□□ -1.33
TMEM258-206ENST00000541893 VPS33BQ9H267 617 aa6.77□□□□□ -1.33
TMEM258-206ENST00000541893 C12orf49Q9H741 205 aa6.77□□□□□ -1.33
TMEM258-206ENST00000541893 PRDM9Q9NQV7 894 aa6.77□□□□□ -1.33
TMEM258-206ENST00000541893 FAN1Q9Y2M0 1017 aa6.77□□□□□ -1.33
TMEM258-206ENST00000541893 COL3A1P02461 1466 aaPredicted RBP6.77□□□□□ -1.33
TMEM258-206ENST00000541893 RNF123Q5XPI4 1314 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 CCDC194A0A1B0GVG4 234 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 FAM177BA6PVY3 158 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 PDGFAP04085 211 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 S100BP04271 92 aaPredicted RBP6.76□□□□□ -1.33
TMEM258-206ENST00000541893 INHAP05111 366 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 U2AF1L5P0DN76 240 aaPredicted RBP6.76□□□□□ -1.33
TMEM258-206ENST00000541893 SCTRP47872 440 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 PIP4K2AP48426 406 aaPredicted RBP6.76□□□□□ -1.33
TMEM258-206ENST00000541893 PSMA6P60900 246 aaKnown RBP6.76□□□□□ -1.33
TMEM258-206ENST00000541893 U2AF1Q01081 240 aaKnown RBP eCLIP6.76□□□□□ -1.33
TMEM258-206ENST00000541893 FOXK2Q01167 660 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 NFX1Q12986 1120 aaKnown RBP6.76□□□□□ -1.33
TMEM258-206ENST00000541893 CNGB1Q14028 1251 aaPredicted RBP6.76□□□□□ -1.33
TMEM258-206ENST00000541893 CRY2Q49AN0 593 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 NBPF10Q6P3W6 841 aaKnown RBP6.76□□□□□ -1.33
TMEM258-206ENST00000541893 KIF6Q6ZMV9 814 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 USP50Q70EL3 339 aaPredicted RBP6.76□□□□□ -1.33
TMEM258-206ENST00000541893 MCM10Q7L590 875 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 SLC9A9Q8IVB4 645 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 NBPF15Q8N660 670 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 MORC4Q8TE76 937 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 EDEM1Q92611 657 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 RBM17Q96I25 401 aaKnown RBP6.76□□□□□ -1.33
TMEM258-206ENST00000541893 SRPK1Q96SB4 655 aaKnown RBP6.76□□□□□ -1.33
TMEM258-206ENST00000541893 DDX21Q9NR30 783 aaKnown RBP eCLIP6.76□□□□□ -1.33
TMEM258-206ENST00000541893 GJA3Q9Y6H8 435 aa6.76□□□□□ -1.33
TMEM258-206ENST00000541893 ADAMTSL1Q8N6G6 1762 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 PRAMEF22A3QJZ6 481 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 ZBTB39O15060 712 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 CA12O43570 354 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 HSPA8P11142 646 aaKnown RBP6.75□□□□□ -1.33
TMEM258-206ENST00000541893 HOXA10P31260 410 aaPredicted RBP6.75□□□□□ -1.33
TMEM258-206ENST00000541893 MAP2K2P36507 400 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 RAB15P59190 212 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 ERVK-9P63128 1117 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 ORC1Q13415 861 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 TAF1CQ15572 869 aaPredicted RBP6.75□□□□□ -1.33
TMEM258-206ENST00000541893 HLFQ16534 295 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 PTCRAQ6ISU1 281 aaPredicted RBP6.75□□□□□ -1.33
TMEM258-206ENST00000541893 ERMP1Q7Z2K6 904 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 NIM1KQ8IY84 436 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 ZNF511Q8NB15 262 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 FOXJ1Q92949 421 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 ABHD8Q96I13 439 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 RNPC3Q96LT9 517 aaKnown RBP6.75□□□□□ -1.33
TMEM258-206ENST00000541893 GPR101Q96P66 508 aaPredicted RBP6.75□□□□□ -1.33
TMEM258-206ENST00000541893 CRAMP1Q96RY5 1269 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 TRIM55Q9BYV6 548 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 SCHIP1Q9P0W5 487 aaPredicted RBP6.75□□□□□ -1.33
TMEM258-206ENST00000541893 LRFN2Q9ULH4 789 aa6.75□□□□□ -1.33
TMEM258-206ENST00000541893 IBTKQ9P2D0 1353 aaPredicted RBP6.74□□□□□ -1.33
TMEM258-206ENST00000541893 PPEF1O14829 653 aaPredicted RBP6.74□□□□□ -1.33
TMEM258-206ENST00000541893 C4orf48Q5BLP8 95 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 TAF7LQ5H9L4 462 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 OLFM4Q6UX06 510 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 PPP1R42Q7Z4L9 355 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 RPUSD2Q8IZ73 545 aaKnown RBP6.74□□□□□ -1.33
TMEM258-206ENST00000541893 SUPT20HQ8NEM7 779 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 BAP1Q92560 729 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 CAPNS2Q96L46 248 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 KCTD15Q96SI1 283 aaPredicted RBP6.74□□□□□ -1.33
TMEM258-206ENST00000541893 PNNQ9H307 717 aaKnown RBP6.74□□□□□ -1.33
TMEM258-206ENST00000541893 ZNF408Q9H9D4 720 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 NEUROD4Q9HD90 331 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 TYW1Q9NV66 732 aaKnown RBP6.74□□□□□ -1.33
TMEM258-206ENST00000541893 DDX56Q9NY93 547 aaKnown RBP6.74□□□□□ -1.33
TMEM258-206ENST00000541893 FAM8A1Q9UBU6 413 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 SERTAD1Q9UHV2 236 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 STRIP2Q9ULQ0 834 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 RIC1Q4ADV7 1423 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 MAP3K15Q6ZN16 1313 aa6.74□□□□□ -1.33
TMEM258-206ENST00000541893 OPLAHO14841 1288 aa6.73□□□□□ -1.33
TMEM258-206ENST00000541893 CPNE3O75131 537 aaKnown RBP6.73□□□□□ -1.33
TMEM258-206ENST00000541893 CDC45O75419 566 aa6.73□□□□□ -1.33
TMEM258-206ENST00000541893 RPLP1P05386 114 aaKnown RBP6.73□□□□□ -1.33
TMEM258-206ENST00000541893 EPS15P42566 896 aa6.73□□□□□ -1.33
TMEM258-206ENST00000541893 ZAP70P43403 619 aa6.73□□□□□ -1.33
TMEM258-206ENST00000541893 COPS2P61201 443 aa6.73□□□□□ -1.33
TMEM258-206ENST00000541893 MLLT1Q03111 559 aaPredicted RBP6.73□□□□□ -1.33
TMEM258-206ENST00000541893 TNIP1Q15025 636 aa6.73□□□□□ -1.33
TMEM258-206ENST00000541893 LINC01559Q495D7 138 aa6.73□□□□□ -1.33
TMEM258-206ENST00000541893 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.73□□□□□ -1.33
TMEM258-206ENST00000541893 PARP10Q53GL7 1025 aa6.73□□□□□ -1.33
TMEM258-206ENST00000541893 LRP10Q7Z4F1 713 aa6.73□□□□□ -1.33
TMEM258-206ENST00000541893 NGEFQ8N5V2 710 aa6.73□□□□□ -1.33
TMEM258-206ENST00000541893 TTC16Q8NEE8 873 aa6.73□□□□□ -1.33
TMEM258-206ENST00000541893 HHIPL1Q96JK4 782 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms