RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 ERCC5P28715 1186 aaPredicted RBP19.25■□□□□ 0.67
CACNB3-203ENST00000540990 KMT5BQ4FZB7 885 aa19.25■□□□□ 0.67
CACNB3-203ENST00000540990 RRP12Q5JTH9 1297 aaKnown RBP19.25■□□□□ 0.67
CACNB3-203ENST00000540990 SYT10Q6XYQ8 523 aa19.25■□□□□ 0.67
CACNB3-203ENST00000540990 REXO1L1PQ8IX06 675 aa19.25■□□□□ 0.67
CACNB3-203ENST00000540990 SYTL4Q96C24 671 aaPredicted RBP19.25■□□□□ 0.67
CACNB3-203ENST00000540990 ZKSCAN3Q9BRR0 538 aa19.25■□□□□ 0.67
CACNB3-203ENST00000540990 UBAC1Q9BSL1 405 aa19.25■□□□□ 0.67
CACNB3-203ENST00000540990 BRIP1Q9BX63 1249 aa19.25■□□□□ 0.67
CACNB3-203ENST00000540990 SERTAD1Q9UHV2 236 aa19.25■□□□□ 0.67
CACNB3-203ENST00000540990 CACNA1SQ13698 1873 aa19.25■□□□□ 0.67
CACNB3-203ENST00000540990 SPDYE4A6NLX3 237 aa19.24■□□□□ 0.67
CACNB3-203ENST00000540990 POLR2DO15514 142 aaKnown RBP19.24■□□□□ 0.67
CACNB3-203ENST00000540990 PRPF3O43395 683 aaKnown RBP19.24■□□□□ 0.67
CACNB3-203ENST00000540990 NR5A1Q13285 461 aa19.24■□□□□ 0.67
CACNB3-203ENST00000540990 SMARCE1Q969G3 411 aa19.24■□□□□ 0.67
CACNB3-203ENST00000540990 SHISA4Q96DD7 197 aa19.24■□□□□ 0.67
CACNB3-203ENST00000540990 PHF20Q9BVI0 1012 aa19.24■□□□□ 0.67
CACNB3-203ENST00000540990 DLEC1Q9Y238 1755 aa19.24■□□□□ 0.67
CACNB3-203ENST00000540990 AHDC1Q5TGY3 1603 aaPredicted RBP19.23■□□□□ 0.67
CACNB3-203ENST00000540990 TNKSO95271 1327 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 TMEM232C9JQI7 657 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 BMP15O95972 392 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 PRR29P0C7W0 189 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 UBE4AQ14139 1066 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 PKN1Q16512 942 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 TMED8Q6PL24 325 aaPredicted RBP19.23■□□□□ 0.67
CACNB3-203ENST00000540990 SH3RF1Q7Z6J0 888 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 ADGRA1Q86SQ6 560 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 OXER1Q8TDS5 423 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.23■□□□□ 0.67
CACNB3-203ENST00000540990 COL1A1P02452 1464 aaPredicted RBP19.23■□□□□ 0.67
CACNB3-203ENST00000540990 MAGEB6P1A0A0J9YX57 407 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 ZBTB22O15209 634 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 RGL2O15211 777 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 H2AFXP16104 143 aaPredicted RBP19.23■□□□□ 0.67
CACNB3-203ENST00000540990 FMR1Q06787 632 aaKnown RBP eCLIP19.23■□□□□ 0.67
CACNB3-203ENST00000540990 MIGA1Q8NAN2 632 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 SRRTQ9BXP5 876 aaKnown RBP19.23■□□□□ 0.67
CACNB3-203ENST00000540990 TOMM22Q9NS69 142 aa19.23■□□□□ 0.67
CACNB3-203ENST00000540990 RBM28Q9NW13 759 aaKnown RBP19.23■□□□□ 0.67
CACNB3-203ENST00000540990 THRAP3Q9Y2W1 955 aaKnown RBP19.23■□□□□ 0.67
CACNB3-203ENST00000540990 LOC102724428A0A0B4J2F2 783 aa19.22■□□□□ 0.67
CACNB3-203ENST00000540990 GOLGA6L9A6NEM1 432 aa19.22■□□□□ 0.67
CACNB3-203ENST00000540990 ZSCAN12O43309 604 aa19.22■□□□□ 0.67
CACNB3-203ENST00000540990 XBP1P17861 261 aa19.22■□□□□ 0.67
CACNB3-203ENST00000540990 PLCD1P51178 756 aa19.22■□□□□ 0.67
CACNB3-203ENST00000540990 SIK1P57059 783 aa19.22■□□□□ 0.67
CACNB3-203ENST00000540990 SF3B3Q15393 1217 aaKnown RBP19.22■□□□□ 0.67
CACNB3-203ENST00000540990 ELF2Q15723 593 aa19.22■□□□□ 0.67
CACNB3-203ENST00000540990 SPECC1Q5M775 1068 aa19.22■□□□□ 0.67
CACNB3-203ENST00000540990 NUTM2AQ8IVF1 878 aaPredicted RBP19.22■□□□□ 0.67
CACNB3-203ENST00000540990 MED15Q96RN5 788 aa19.22■□□□□ 0.67
CACNB3-203ENST00000540990 GNL3LQ9NVN8 582 aaKnown RBP19.22■□□□□ 0.67
CACNB3-203ENST00000540990 NIP7Q9Y221 180 aaKnown RBP eCLIP19.22■□□□□ 0.67
CACNB3-203ENST00000540990 NFE2L3Q9Y4A8 694 aa19.22■□□□□ 0.67
CACNB3-203ENST00000540990 COL4A1P02462 1669 aa19.22■□□□□ 0.67
CACNB3-203ENST00000540990 SCN7AQ01118 1682 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 ZNF831Q5JPB2 1677 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 PDS5AQ29RF7 1337 aaKnown RBP19.21■□□□□ 0.67
CACNB3-203ENST00000540990 TRIM75PA6NK02 468 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 STX10O60499 249 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 CALM1P0DP23 149 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 CALM2P0DP24 149 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 CALM3P0DP25 149 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 ATP6V1AP38606 617 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 ITPK1Q13572 414 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 FBXO38Q6PIJ6 1188 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 ENAHQ8N8S7 591 aaPredicted RBP19.21■□□□□ 0.67
CACNB3-203ENST00000540990 TNFRSF25Q93038 417 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 ZSCAN10Q96SZ4 725 aaPredicted RBP19.21■□□□□ 0.67
CACNB3-203ENST00000540990 CSRNP2Q9H175 543 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 PRDM10Q9NQV6 1147 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 GABPB1Q06547 395 aaPredicted RBP19.21■□□□□ 0.67
CACNB3-203ENST00000540990 SPECC1LQ69YQ0 1117 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 CLEC4GQ6UXB4 293 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 NUP133Q8WUM0 1156 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 FERMT2Q96AC1 680 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 CCDC34Q96HJ3 373 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 PKNOX2Q96KN3 472 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 BCL11BQ9C0K0 894 aaPredicted RBP19.21■□□□□ 0.67
CACNB3-203ENST00000540990 CABP5Q9NP86 173 aa19.21■□□□□ 0.67
CACNB3-203ENST00000540990 MYH14Q7Z406 1995 aaKnown RBP19.2■□□□□ 0.66
CACNB3-203ENST00000540990 DDAH1O94760 285 aa19.2■□□□□ 0.66
CACNB3-203ENST00000540990 KRT2P35908 639 aa19.2■□□□□ 0.66
CACNB3-203ENST00000540990 NR1I3Q14994 352 aa19.2■□□□□ 0.66
CACNB3-203ENST00000540990 TC2NQ8N9U0 490 aa19.2■□□□□ 0.66
CACNB3-203ENST00000540990 NRAPQ86VF7 1730 aa19.19■□□□□ 0.66
CACNB3-203ENST00000540990 A0A1B0GTH6 734 aa19.19■□□□□ 0.66
CACNB3-203ENST00000540990 SEMA3EO15041 775 aa19.19■□□□□ 0.66
CACNB3-203ENST00000540990 SLFN14P0C7P3 912 aa19.19■□□□□ 0.66
CACNB3-203ENST00000540990 TROAPQ12815 778 aa19.19■□□□□ 0.66
CACNB3-203ENST00000540990 SDR42E1Q8WUS8 393 aa19.19■□□□□ 0.66
CACNB3-203ENST00000540990 BSDC1Q9NW68 430 aaPredicted RBP19.19■□□□□ 0.66
CACNB3-203ENST00000540990 ZNF652Q9Y2D9 606 aa19.19■□□□□ 0.66
CACNB3-203ENST00000540990 ROBO1Q9Y6N7 1651 aa19.19■□□□□ 0.66
CACNB3-203ENST00000540990 SPATA31A1Q5TZJ5 1347 aa19.19■□□□□ 0.66
CACNB3-203ENST00000540990 VWA3AA6NCI4 1184 aa19.18■□□□□ 0.66
CACNB3-203ENST00000540990 AKAP17AQ02040 695 aaKnown RBP19.18■□□□□ 0.66
CACNB3-203ENST00000540990 NPY5RQ15761 445 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms