RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.82□□□□□ -1.32
PTPRD-214ENST00000540109 FAM114A2Q9NRY5 505 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 IQSEC3Q9UPP2 1182 aaPredicted RBP6.82□□□□□ -1.32
PTPRD-214ENST00000540109 PFKFB2O60825 505 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 CDKL5O76039 1030 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 PPARDQ03181 441 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 CEP128Q6ZU80 1094 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 FAM76AQ8TAV0 307 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 GNL3LQ9NVN8 582 aaKnown RBP6.82□□□□□ -1.32
PTPRD-214ENST00000540109 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.82□□□□□ -1.32
PTPRD-214ENST00000540109 DNAJC8O75937 253 aaPredicted RBP6.82□□□□□ -1.32
PTPRD-214ENST00000540109 PSMD7P51665 324 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 CCDC6Q16204 474 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 ANO6Q4KMQ2 910 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 USP48Q86UV5 1035 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 GFM2Q969S9 779 aaKnown RBP6.82□□□□□ -1.32
PTPRD-214ENST00000540109 AGXT2Q9BYV1 514 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 FEZ2Q9UHY8 353 aaPredicted RBP6.82□□□□□ -1.32
PTPRD-214ENST00000540109 ANKRD62A6NC57 917 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 PPFIA4O75335 1185 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 IGHMBP2P38935 993 aaKnown RBP6.82□□□□□ -1.32
PTPRD-214ENST00000540109 NEDD9Q14511 834 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 WHAMMP3Q1A5X7 153 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 KANK3Q6NY19 840 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 P3H4Q92791 437 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 XAGE2Q96GT9 111 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 RMDN2Q96LZ7 410 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 NDUFAB1O14561 156 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 CPLX1O14810 134 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 PFDN1O60925 122 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 STK38Q15208 465 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 CLUL1Q15846 466 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 LDHAL6AQ6ZMR3 332 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 CPLX3Q8WVH0 158 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 EXOC4Q96A65 974 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 NYXQ9GZU5 481 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 NBPF3Q9H094 633 aa6.82□□□□□ -1.32
PTPRD-214ENST00000540109 CCDC69A6NI79 296 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 TRIM66O15016 1216 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 ECM2O94769 699 aaPredicted RBP6.81□□□□□ -1.32
PTPRD-214ENST00000540109 MATR3P43243 847 aaKnown RBP eCLIP6.81□□□□□ -1.32
PTPRD-214ENST00000540109 RCAN1P53805 252 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 ALX1Q15699 326 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 ERCC6LQ2NKX8 1250 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 LRRC23Q53EV4 343 aaPredicted RBP6.81□□□□□ -1.32
PTPRD-214ENST00000540109 CFAP57Q96MR6 1250 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 ZNF215Q9UL58 517 aaPredicted RBP6.81□□□□□ -1.32
PTPRD-214ENST00000540109 ASAP1Q9ULH1 1129 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 RIC1Q4ADV7 1423 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 CNTNAP4Q9C0A0 1308 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 SEMA3EO15041 775 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 RC3H1Q5TC82 1133 aaKnown RBP6.81□□□□□ -1.32
PTPRD-214ENST00000540109 RALYLQ86SE5 291 aaKnown RBP6.81□□□□□ -1.32
PTPRD-214ENST00000540109 TTLL11Q8NHH1 800 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 TAOK3Q9H2K8 898 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 PDS5AQ29RF7 1337 aaKnown RBP6.81□□□□□ -1.32
PTPRD-214ENST00000540109 USO1O60763 962 aaKnown RBP6.81□□□□□ -1.32
PTPRD-214ENST00000540109 HSF2BPO75031 334 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 ITGA6P23229 1130 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 PPP2R3AQ06190 1150 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 E2F5Q15329 346 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 CNNM2Q9H8M5 875 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 SPATA31A6Q5VVP1 1343 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 SMIM24O75264 130 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 FCHSD1Q86WN1 690 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 LARP6Q9BRS8 491 aaKnown RBP6.81□□□□□ -1.32
PTPRD-214ENST00000540109 BATF3Q9NR55 127 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 BAIAP2L1Q9UHR4 511 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 MTMR6Q9Y217 621 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 RIPOR2Q9Y4F9 1068 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 BCORQ6W2J9 1755 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 DUOX1Q9NRD9 1551 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 PDE8BO95263 885 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 DNA2P51530 1060 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 MAP3K12Q12852 859 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 WWC2Q6AWC2 1192 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 CCDC174Q6PII3 467 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 MMS22LQ6ZRQ5 1243 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 PPFIBP2Q8ND30 876 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 ACRBPQ8NEB7 543 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 NCOA7Q8NI08 942 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 KLHDC4Q8TBB5 520 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 WASF1Q92558 559 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 TRIM4Q9C037 500 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 IL25Q9H293 177 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 VCX3BQ9H321 246 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 VCX3AQ9NNX9 186 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 MAGEC2Q9UBF1 373 aaPredicted RBP6.81□□□□□ -1.32
PTPRD-214ENST00000540109 CNPY2Q9Y2B0 182 aa6.81□□□□□ -1.32
PTPRD-214ENST00000540109 MXRA7P84157 204 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 VPS72Q15906 364 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 PDCD2Q16342 344 aaPredicted RBP6.8□□□□□ -1.32
PTPRD-214ENST00000540109 TSNAXIP1Q2TAA8 658 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 CTAGE1Q96RT6 745 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 CARD6Q9BX69 1037 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 NACAP1Q9BZK3 213 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 PCP11498 1178 aaKnown RBP6.8□□□□□ -1.32
PTPRD-214ENST00000540109 PPP2R5BQ15173 497 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 WHAMMQ8TF30 809 aa6.8□□□□□ -1.32
PTPRD-214ENST00000540109 TRIM6Q9C030 488 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms