RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SENP2Q9HC62 589 aa15.11■□□□□ 0.01
UBE3B-209ENST00000539584 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-209ENST00000539584 WWC3Q9ULE0 1092 aa15.11■□□□□ 0.01
UBE3B-209ENST00000539584 DENND2AQ9ULE3 1009 aa15.11■□□□□ 0.01
UBE3B-209ENST00000539584 IQSEC3Q9UPP2 1182 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-209ENST00000539584 PHKA1P46020 1223 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 FMR1Q06787 632 aaKnown RBP eCLIP15.1■□□□□ 0.01
UBE3B-209ENST00000539584 PPFIBP1Q86W92 1011 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 CNGA4Q8IV77 575 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 DDX17Q92841 729 aaKnown RBP15.1■□□□□ 0.01
UBE3B-209ENST00000539584 CCDC85AQ96PX6 553 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-209ENST00000539584 EPB41L4AQ9HCS5 686 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-209ENST00000539584 STRN4Q9NRL3 753 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 ITIH6Q6UXX5 1313 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 LRP5O75197 1615 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 ECM29Q5VYK3 1845 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 KIF5CO60282 957 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 TBC1D8O95759 1140 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 FANCBQ8NB91 859 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 WDR24Q96S15 920 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 MYO1AQ9UBC5 1043 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 RTL9Q8NET4 1388 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 ARAP2Q8WZ64 1704 aa15.1■□□□□ 0.01
UBE3B-209ENST00000539584 GSG1L2A8MUP6 293 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 FECHP22830 423 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 TMED8Q6PL24 325 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-209ENST00000539584 TOGARAM2Q6ZUX3 1019 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 SH3RF1Q7Z6J0 888 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 PSD3Q9NYI0 1048 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 TRIM75PA6NK02 468 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 FOXN1O15353 648 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 MBD4O95243 580 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 PCP11498 1178 aaKnown RBP15.09■□□□□ 0.01
UBE3B-209ENST00000539584 PBX1P40424 430 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 ADKP55263 362 aaKnown RBP15.09■□□□□ 0.01
UBE3B-209ENST00000539584 AKAP17AQ02040 695 aaKnown RBP15.09■□□□□ 0.01
UBE3B-209ENST00000539584 RASGRP2Q7LDG7 609 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 SRGAP1Q7Z6B7 1085 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 MAGEB6Q8N7X4 407 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 NKX2-3Q8TAU0 364 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 MYL10Q9BUA6 226 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 TSPYL1Q9H0U9 437 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
UBE3B-209ENST00000539584 TRMT112Q9UI30 125 aaKnown RBP15.09■□□□□ 0.01
UBE3B-209ENST00000539584 TTF2Q9UNY4 1162 aaKnown RBP15.09■□□□□ 0.01
UBE3B-209ENST00000539584 MYH3P11055 1940 aa15.08■□□□□ 0
UBE3B-209ENST00000539584 TDO2P48775 406 aa15.08■□□□□ 0
UBE3B-209ENST00000539584 SPAG1Q07617 926 aa15.08■□□□□ 0
UBE3B-209ENST00000539584 TRIM14Q14142 442 aa15.08■□□□□ 0
UBE3B-209ENST00000539584 SMC1AQ14683 1233 aaKnown RBP15.08■□□□□ 0
UBE3B-209ENST00000539584 CDKAL1Q5VV42 579 aa15.08■□□□□ 0
UBE3B-209ENST00000539584 CCDC12Q8WUD4 166 aaPredicted RBP15.08■□□□□ 0
UBE3B-209ENST00000539584 PARD6BQ9BYG5 372 aa15.08■□□□□ 0
UBE3B-209ENST00000539584 BRMS1Q9HCU9 246 aa15.08■□□□□ 0
UBE3B-209ENST00000539584 ANAPC4Q9UJX5 808 aa15.08■□□□□ 0
UBE3B-209ENST00000539584 ZNF330Q9Y3S2 320 aaPredicted RBP15.08■□□□□ 0
UBE3B-209ENST00000539584 PCDHB6Q9Y5E3 794 aa15.08■□□□□ 0
UBE3B-209ENST00000539584 ADGRG1Q9Y653 693 aa15.08■□□□□ 0
UBE3B-209ENST00000539584 DOCK2Q92608 1830 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 SHANK3Q9BYB0 1731 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 PRR29P0C7W0 189 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 GUCY1A2P33402 732 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 APTXQ7Z2E3 356 aaKnown RBP15.07■□□□□ 0
UBE3B-209ENST00000539584 ZNF654Q8IZM8 581 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 IGSF22Q8N9C0 903 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 UBAC1Q9BSL1 405 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 CSRNP2Q9H175 543 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 SAMSN1Q9NSI8 373 aaKnown RBP15.07■□□□□ 0
UBE3B-209ENST00000539584 RBM28Q9NW13 759 aaKnown RBP15.07■□□□□ 0
UBE3B-209ENST00000539584 ADD3Q9UEY8 706 aaKnown RBP15.07■□□□□ 0
UBE3B-209ENST00000539584 CDC23Q9UJX2 597 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 KCNJ14Q9UNX9 436 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 LRRC10BA6NIK2 292 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 ERLIN1O75477 346 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 USP5P45974 858 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 CTDSPL2Q05D32 466 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 CUL4BQ13620 913 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 MUM1L1Q5H9M0 696 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 SPECC1Q5M775 1068 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 TMTC1Q8IUR5 882 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 FAM177A1Q8N128 213 aaPredicted RBP15.07■□□□□ 0
UBE3B-209ENST00000539584 ESR2Q92731 530 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 ST7Q9NRC1 585 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 ANKRD36CQ5JPF3 1778 aa15.07■□□□□ 0
UBE3B-209ENST00000539584 SYNRGQ9UMZ2 1314 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 CALM1P0DP23 149 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 CALM2P0DP24 149 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 CALM3P0DP25 149 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 KRT2P35908 639 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 CHMP4BP1P59074 171 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 GOLGA8FQ08AF8 430 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 GOLGA8DPQ0D2H9 430 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 SEMA3FQ13275 785 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 HLFQ16534 295 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 EXOC4Q96A65 974 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 DHX58Q96C10 678 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 MED15Q96RN5 788 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 FUT8Q9BYC5 575 aa15.06■□□□□ 0
UBE3B-209ENST00000539584 GBP3Q9H0R5 595 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms